prot_L-elsbetiae_contig6665.15392.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6665.15392.1
Unique Nameprot_L-elsbetiae_contig6665.15392.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length317
Homology
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BLAST of mRNA_L-elsbetiae_contig6665.15392.1 vs. uniprot
Match: A0A6H5KMP7_9PHAE (Ricin B-type lectin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMP7_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.790e-9
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    8 RFITAASDGDLDAVKAYLKDGLDVNSQDWDKLTALVA 44
            RFITAASDGDL+AVK +LKDGLDVNSQDWDKLTALVA
Sbjct:  170 RFITAASDGDLNAVKTFLKDGLDVNSQDWDKLTALVA 206
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6665.15392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMP7_9PHAE1.790e-991.89Ricin B-type lectin domain-containing protein n=2 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 104..119
score: 35.96
coord: 152..166
score: 41.72
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 136..165
e-value: 0.0019
score: 27.4
coord: 37..66
e-value: 3.6E-5
score: 33.2
coord: 202..231
e-value: 0.037
score: 23.2
coord: 169..198
e-value: 0.67
score: 19.0
coord: 235..268
e-value: 0.055
score: 22.6
coord: 4..33
e-value: 2100.0
score: 2.7
coord: 70..99
e-value: 0.025
score: 23.7
coord: 273..302
e-value: 0.21
score: 20.7
coord: 103..132
e-value: 0.059
score: 22.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 276..305
e-value: 5.1E-4
score: 20.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..135
score: 10.472
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 273..305
score: 12.422
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 235..257
score: 8.683
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 37..69
score: 13.678
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 136..168
score: 12.983
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 169..201
score: 9.885
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 70..102
score: 9.885
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 202..234
score: 10.152
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 6..71
e-value: 8.6E-19
score: 69.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 72..199
e-value: 2.9E-37
score: 130.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 200..317
e-value: 8.8E-32
score: 111.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 11..315
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 174..269
e-value: 1.5E-16
score: 60.8
coord: 10..68
e-value: 2.2E-9
score: 37.8
coord: 75..167
e-value: 2.8E-14
score: 53.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 12..317
score: 85.502
NoneNo IPR availablePANTHERPTHR24166:SF48ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 65coord: 78..262
NoneNo IPR availablePANTHERPTHR24166FAMILY NOT NAMEDcoord: 192..316
NoneNo IPR availablePANTHERPTHR24166:SF48ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 65coord: 192..316
NoneNo IPR availablePANTHERPTHR24166:SF48ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 65coord: 1..195
NoneNo IPR availablePANTHERPTHR24166FAMILY NOT NAMEDcoord: 1..195
NoneNo IPR availablePANTHERPTHR24166FAMILY NOT NAMEDcoord: 78..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6665contigL-elsbetiae_contig6665:2606..10165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6665.15392.1mRNA_L-elsbetiae_contig6665.15392.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6665 2606..10165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6665.15392.1 ID=prot_L-elsbetiae_contig6665.15392.1|Name=mRNA_L-elsbetiae_contig6665.15392.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp
MYASHRGRFITAASDGDLDAVKAYLKDGLDVNSQDWDKLTALVAAASQGH
LTVVKLLLDKGADVNAKDKDEISGLMEASIMGHVDVVKELLKAGAEVDAE
AKSGVTALWLASGEGRTDVLKQLLESGASANNSRSDGITALMGAAAGGHG
EVVNMLLKAGADVGAKDHDEVTALMNAAESGSLEAVEALLAKGADAGSMS
TTAFTPLIVAAAGGHLAVVKALVAKGIEVDAMHADGVSALMYASAGGHPE
VVKVLLEGEGPAKADPNLKHVQQGGTALMEAATSGSQEVVDLLLAAGADP
MVRDKDGVSPLMSAAAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom