prot_L-elsbetiae_contig6654.15384.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6654.15384.1
Unique Nameprot_L-elsbetiae_contig6654.15384.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length306
Homology
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: D8LTS9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS9_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 8.270e-76
Identity = 178/305 (58.36%), Postives = 194/305 (63.61%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAMDAGKKLPCSHIFHFQCLRLWLQQQQACPTCRANIPTHNTANTAGAAAERAAXXXXXXXXXXXXXXXARPGGSAGAGGNEGAQVLGMPRAADGMGGPPAAGXXXXXXXGAAEFGPFGGNGAGRVAVAAPAPGFAGLVGAGAXXXXXXXXXXGEKSPAETVLHAVIVVSAARSGAGVRESTNQDSPTLRTEAFDSVLLLMAPPAPCGSFFVYGGWVGGPGREGEVRLVEIEQPALQAGDTGLPPAGVDEMMMGAPMAGGGAEAGREGLRQR-RGVLAGAN 304
            MDERFP ATEEELA CEHTCIICRD MDAGKKLPC HIFHFQCLR+WLQQQQACPTCRANIP H T   A AAAER                 A P G+   G   G  +  MPRAADG+G   A+ XXXXXXX  A FG           VAAPAPGFAGLV  GA XXXXX    G       VL AV V+S    GA VR+   Q + T+RTE   SVLLL+APP  CGS  V+GGWVGGPG EG+VRLVEI Q AL  G  G  P  VDEM+ G    GGG E   +GLR+R RGVLAGA+
Sbjct:  272 MDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQCLRMWLQQQQACPTCRANIPAHVTVAAATAAAERV--EQGGARAPGFAALGAGPVGTVDGGDGGGGALFEMPRAADGVGA--ASXXXXXXXXVQAGFGXX----XXXXXVAAPAPGFAGLVEGGAGXXXXXGGARG-------VLKAVFVISPT--GARVRQGLKQGTATVRTEPSKSVLLLLAPPCSCGSLLVHGGWVGGPGNEGDVRLVEIGQSAL-GGSGGATPTPVDEMLDGPEAVGGGRE---DGLRRRHRGVLAGAD 555          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A7S2GDQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDQ5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.320e-27
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAMDAGKKLPCSHIFHFQCLRLWLQQQQACPTCRANIP 62
            M++RFP ATEEEL  CEHTCIICRD M++GKKL C HIFHFQCLRLWLQQQQ CPTCRA IP
Sbjct:  148 MNDRFPDATEEELVTCEHTCIICRDHMESGKKLMCGHIFHFQCLRLWLQQQQTCPTCRAEIP 209          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A7S4DEQ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEQ8_HETAK)

HSP 1 Score: 113 bits (283), Expect = 5.600e-27
Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAMDAGKKLPCSHIFHFQCLRLWLQQQQACPTCRANIPTHNTANTAG 71
            M+ERFP AT E+L  CE+TCIICRD MDAGK LPC HIFHFQCLR+WLQ QQ+CPTCRA+IP    A   G
Sbjct:  114 MNERFPDATPEQLEECENTCIICRDHMDAGKSLPCGHIFHFQCLRMWLQHQQSCPTCRADIPAAMPAGGGG 184          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A6T8HG76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8HG76_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.410e-25
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAMDAGKKLPCSHIFHFQCLRLWLQQQQACPTCRANIPTHNTANTAGAAAER 76
            M+ERF  ATEEEL  C  TCIICR+ MD GKKL C H+FHF CLR WLQQQQ+CPTCR +IPT ++A    AAA R
Sbjct:   33 MNERFADATEEELEGCGRTCIICRETMDQGKKLECGHVFHFYCLREWLQQQQSCPTCRCDIPTDSSAARRNAAANR 108          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A4D9CLU7_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLU7_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.750e-25
Identity = 52/68 (76.47%), Postives = 58/68 (85.29%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAMDAG---KKLPCSHIFHFQCLRLWLQQQQACPTCRANIPTHN 65
            M+ERFP AT EEL  CEHTCIICRD M+AG   KKLPCSHIFH  CLRLWLQQQQ+CPTCRA+IPT++
Sbjct:  271 MNERFPDATSEELIGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNS 338          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A6H5KFS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS7_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 7.330e-25
Identity = 144/326 (44.17%), Postives = 158/326 (48.47%), Query Frame = 0
Query:   41 FQCLRLWLQQQQACPTCRANIPTHNTANTAGAAAERAAXXXXXXXXXXXXXXXAR-----------------------------PGGSAGAGGNE--GAQVLGMPRAADGMGGPPAAGXXXXXXXGAAEFGPFGGNGAGRVAVAAPAPGFAGLVGAGAXXXXXXXXXXGEKSP------------------------------AETVLHAVIVVSAARSGAGVRESTNQDSPTLRTEAFDSVLLLMAPPAPCGSFFVYGGWVGGPGREGEVRLVEIEQPALQAGDTGLPPAGVDEMMMGAPMAGGGAEAGREGLRQR-RGVLAGAN 304
            ++CLR+WLQQQQACPTCRANIPTH TA TA        XXXXXXXXXXXXXXX                               P G+  A G E  GAQ    PRAA                 GA   G  GG GA         P  A  VGA +  XXXXXXXX                                   A  VL AV VVS    GA VR+   Q + T+RTE   SVLLL+APP  CGS  V GGWVGGPG EGEVRLVEI Q AL  G  G+ P  VDEM+ G    GGG E   +GLR+R RGVLAGA+
Sbjct:  188 YRCLRMWLQQQQACPTCRANIPTHGTAATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVGAVAAPGVEQGGAQA---PRAA---------------ALGATVGGGDGGRGA-----LFEMPRVADGVGAASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAREVLKAVFVVSPT--GARVRQGLKQGTATVRTEPAKSVLLLLAPPCSCGSLLVNGGWVGGPGSEGEVRLVEIGQSAL-GGSGGVTPTPVDEMLDGPEAVGGGRE---DGLRRRHRGVLAGAD 484          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A7S2SCZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCZ9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.810e-24
Identity = 49/62 (79.03%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAMDAGKKLPCSHIFHFQCLRLWLQQQQACPTCRANIP 62
            ++ERFP ATE+EL ACEHTCIICRD M  GKKLPC HIFH  CLRLWLQQQQ CPTCRA IP
Sbjct:  293 LNERFPDATEDELEACEHTCIICRDHMAEGKKLPCGHIFHVDCLRLWLQQQQTCPTCRAPIP 354          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A7S1BWC3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWC3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.960e-23
Identity = 48/63 (76.19%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAMDAGKKLPCSHIFHFQCLRLWLQQQQACPTCRANIPT 63
            M+ERFP ATEEEL  C  TCIICRD M  GKKLPC HIFHF CLR WLQQQQ+CPTCR  IPT
Sbjct:  476 MNERFPDATEEELEECNRTCIICRDQMQTGKKLPCGHIFHFYCLRQWLQQQQSCPTCRTEIPT 538          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A8J2SMG0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMG0_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.550e-20
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAMDAGKKLPCSHIFHFQCLRLWLQQQQACPTCRANIP 62
            MDERFP ATEEE+      CIICRD M  G++LPC H+FHF CLRLWLQQQQ+CPTCR +IP
Sbjct:  272 MDERFPPATEEEIREAGGICIICRDDMSEGRRLPCGHVFHFACLRLWLQQQQSCPTCRQDIP 333          
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Match: A0A3M6VFB8_9STRA (RING-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFB8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.670e-19
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 MDERFPAATEEELAACEHTCIICRDAM--DAGKKLPCSHIFHFQCLRLWLQQQQACPTCRANIPTHN 65
            ++ERFP  TEEEL   + TCIICR+ M  DA KKLPCSHIFH  CL++W+Q+QQ CPTCR+NIPT +
Sbjct:  247 LNERFPNPTEEELQETDRTCIICREEMIPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSNIPTES 313          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6654.15384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTS9_ECTSI8.270e-7658.36RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2GDQ5_9STRA1.320e-2780.65Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4DEQ8_HETAK5.600e-2770.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6T8HG76_9STRA2.410e-2565.79Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A4D9CLU7_9STRA3.750e-2576.47RING-type domain-containing protein n=2 Tax=Monodo... [more]
A0A6H5KFS7_9PHAE7.330e-2544.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SCZ9_9STRA4.810e-2479.03Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1BWC3_9STRA1.960e-2376.19Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8J2SMG0_9STRA1.550e-2069.35Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3M6VFB8_9STRA3.670e-1964.18RING-type domain-containing protein n=2 Tax=Perono... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 20..57
e-value: 3.5E-6
score: 36.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 19..58
e-value: 1.8E-10
score: 41.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 20..58
score: 12.165
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..70
e-value: 4.7E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 1..139
NoneNo IPR availablePANTHERPTHR22763:SF169coord: 1..139
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6654contigL-elsbetiae_contig6654:428..3239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6654.15384.1mRNA_L-elsbetiae_contig6654.15384.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6654 404..3239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6654.15384.1 ID=prot_L-elsbetiae_contig6654.15384.1|Name=mRNA_L-elsbetiae_contig6654.15384.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp
MDERFPAATEEELAACEHTCIICRDAMDAGKKLPCSHIFHFQCLRLWLQQ
QQACPTCRANIPTHNTANTAGAAAERAAAAAGAVAPAPAAAVGARPGGSA
GAGGNEGAQVLGMPRAADGMGGPPAAGGAGGAAAGAAEFGPFGGNGAGRV
AVAAPAPGFAGLVGAGAAAAGGGVGGGGEKSPAETVLHAVIVVSAARSGA
GVRESTNQDSPTLRTEAFDSVLLLMAPPAPCGSFFVYGGWVGGPGREGEV
RLVEIEQPALQAGDTGLPPAGVDEMMMGAPMAGGGAEAGREGLRQRRGVL
AGAND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD