prot_L-elsbetiae_contig6647.15375.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6647.15375.1
Unique Nameprot_L-elsbetiae_contig6647.15375.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length235
Homology
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BLAST of mRNA_L-elsbetiae_contig6647.15375.1 vs. uniprot
Match: D7G0V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V5_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 2.270e-56
Identity = 134/236 (56.78%), Postives = 158/236 (66.95%), Query Frame = 0 
Query:    1 LSISTAAHAASVGEERFRKGDCRGASRLLRLALRALDG--GLAGAAATSAPPAARASGLRQTLLFSLAHCCSKSGEHNQAIQCIEQLESDG-WQTTQATADGGRATVAPAFLFAKCKVLADAGDLSAAFDAAESLIAAAPLLPAGAASSLSASSAGRCSQEHRD-LDLTTARMMCSRDDGSDRSLGLFASIAERFPETPKAFDARVALLAALAAAARLVNQGHGLERRFDPDGMVE 232
            L +STA HAASVGEERF+KGDCRGASR+LRLAL+A+ G  G    A  S P AA    LR+T+LFSLAHCCSKSG+HN AI+ I+ LE  G W      A GG     P FLFAKCKVL DAGDL+ A+ AA++L+A  P  P+G  +      AG    E  D LDL  AR++ SRDD SDRSL LFA+IA RF  TPKA DARVALL+ LA AARL ++G G    + PDG  E
Sbjct:  163 LRMSTAVHAASVGEERFKKGDCRGASRILRLALQAIGGDVGSGPTATASDPQAAHTGKLRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGGGW-----CAKGGGTDPPPKFLFAKCKVLTDAGDLTGAYTAAKALVALTPA-PSGKPT------AGVGDGEPEDGLDLAAARLISSRDDCSDRSLDLFAAIASRFAGTPKAVDARVALLSGLAMAARLRSEGGGAGW-WSPDGQHE 385
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6647.15375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0V5_ECTSI2.270e-5656.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6647contigL-elsbetiae_contig6647:1311..9068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6647.15375.1mRNA_L-elsbetiae_contig6647.15375.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6647 1311..9070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6647.15375.1 ID=prot_L-elsbetiae_contig6647.15375.1|Name=mRNA_L-elsbetiae_contig6647.15375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp
LSISTAAHAASVGEERFRKGDCRGASRLLRLALRALDGGLAGAAATSAPP
AARASGLRQTLLFSLAHCCSKSGEHNQAIQCIEQLESDGWQTTQATADGG
RATVAPAFLFAKCKVLADAGDLSAAFDAAESLIAAAPLLPAGAASSLSAS
SAGRCSQEHRDLDLTTARMMCSRDDGSDRSLGLFASIAERFPETPKAFDA
RVALLAALAAAARLVNQGHGLERRFDPDGMVEPPP
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