prot_L-elsbetiae_contig6642.15372.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6642.15372.1
Unique Nameprot_L-elsbetiae_contig6642.15372.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length82
Homology
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.030e-40
Identity = 67/82 (81.71%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            MYYGHYS+GHQGGVW +N MRDN+QYGFDPHDDSD LTI++N V+GNGNHGIIASKRCNN+KI+NNEV++GGE+AVGIFLHR
Sbjct:  394 MYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHR 475          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 9.400e-38
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            MYYGHYSFGH GG+WT N M DN QYGFDPHDDSD L IA+NTV+GNGNHGIIASKRCNN+KI++N V++GGE AVGIFLHR
Sbjct:  601 MYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHR 682          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 9.700e-38
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            MYYGHYSFGH GG+WT N M DN QYGFDPHDDSD L IA+NTV+GNGNHGIIASKRCNN+KI++N V++GGE AVGIFLHR
Sbjct:  662 MYYGHYSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHR 743          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.820e-37
Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            MYYG YSFGHQGGVWTNN M DN QYGFDPHDDSDYL IA N V+ N NHGIIASKRCNN+KIY+NEV++GG +A GIFLHR
Sbjct:  206 MYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHR 287          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 2.170e-36
Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            +YYGHYS+GHQGGVWTNN M DN QYGFDPHDDSDYLTIA+N V+ N NHGIIASKRCNN+KI+ NEV +GG  A GIFLHR
Sbjct:  646 LYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHR 727          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 5.450e-31
Identity = 59/82 (71.95%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            MYYG YS+GHQGGVWTNN M DN QYGFDPHDDSDYLTIA             ASKRCNN++IYNNEV +GG EAVGIFLHR
Sbjct:  174 MYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHR 255          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 5.050e-29
Identity = 57/82 (69.51%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            +YYGHYS+GHQGGVWTNN M DN QYGFDPHDDSDYLT             IIASKRCNN+KI+ NEV +GG  AVGIFLHR
Sbjct:  203 LYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHR 272          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 2.750e-28
Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIY 64
            MYYG YS+GHQGGVWT+N MRDN+ YGFDPHDDSD LTIA NTV+GNGNHGIIASKRCNN++IY
Sbjct:  610 MYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIY 673          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 5.470e-27
Identity = 55/81 (67.90%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    2 YYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            YYG YS+GHQGGVW NN M DN QYGFDPHDDSDYLT             IIASKRCNN++IYNNEV++GG  A GIFLHR
Sbjct:  284 YYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHR 352          
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.630e-26
Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNHGIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR 82
            MYYGHYS+GHQGGVWTNN M DN QY            +A+N V+ N NHGIIASKRCNN+KIY+N+V +GG +AVGIFLHR
Sbjct:  228 MYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHR 297          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6642.15372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8D9_ECTSI1.030e-4081.71Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JNF5_9PHAE9.400e-3879.27MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LDB5_ECTSI9.700e-3879.27Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI1.820e-3779.27Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI2.170e-3678.05Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FIU4_ECTSI5.450e-3171.95Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE5.050e-2969.51MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FWE8_ECTSI2.750e-2882.81Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRM4_ECTSI5.470e-2767.90Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE3.630e-2664.63MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 58..82
e-value: 120.0
score: 11.5
coord: 10..32
e-value: 5700.0
score: 1.9
coord: 34..56
e-value: 2.9
score: 16.9
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 5..78
e-value: 8.0E-8
score: 32.3
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 33..71
e-value: 6.8E-5
score: 20.5
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..82
e-value: 7.8E-27
score: 96.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 3..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6642contigL-elsbetiae_contig6642:8675..9149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6642.15372.1mRNA_L-elsbetiae_contig6642.15372.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6642 8432..9149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6642.15372.1 ID=prot_L-elsbetiae_contig6642.15372.1|Name=mRNA_L-elsbetiae_contig6642.15372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
MYYGHYSFGHQGGVWTNNTMRDNVQYGFDPHDDSDYLTIAHNTVFGNGNH
GIIASKRCNNIKIYNNEVFNGGEEAVGIFLHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR022441Para_beta_helix_rpt-2
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence