prot_L-elsbetiae_contig6639.15366.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6639.15366.1
Unique Name	prot_L-elsbetiae_contig6639.15366.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	222

Homology

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BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 9.080e-126
Identity = 191/218 (87.61%), Postives = 198/218 (90.83%), Query Frame = 0

Query:    7 TQLFLGTAATLIASSTAFVAPMTVRSVAPSSS---LKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 221
            TQLFLG+AATLIASSTAFVAPM VRS AP+SS   LKM SAGS YV TLPGAPF DGKIFDPL LS+GA P DIKKWREAEIKHGRVAMLASLGVLVAE+YHP FMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLK+ Y PGDLGFDPL LKP+ EA L  M+TKELNNGRLAMIGIAGMLVQELINPADILG
Sbjct:    4 TQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKM-SAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 9.560e-119
Identity = 179/219 (81.74%), Postives = 193/219 (88.13%), Query Frame = 0

Query:    6 STQLFLGTAATLIASSTAFVAPMTVRSVAPSSS---LKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 221
            S+ +FLGTAATLIASSTAFVAPM VRS AP+SS   LKM SAGS YV TLPGAPF DGKIFDPL LS+GA PG+IK WREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTI  A+  PS VTGEGGL+D YSPGDLGFDPL LKPK +A L  MQTKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    4 SSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKM-SAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 5.030e-117
Identity = 178/216 (82.41%), Postives = 191/216 (88.43%), Query Frame = 0

Query:    8 QLFLGTAATLIASSTAFVAPMTVRSVAPSSS---LKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 220
            Q+FLGTAA LIASSTAFVAP+ VRS AP+S+   LKM SAGS YV TLPGAPFSDGKIFDPL LS+GAAPGDIKKWREAEIKHGRVAMLASLG+LVAEEYHP FMG D+IGPA+ HFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLK+ Y PGDLGFDPL LKP  EA L  M+TKELNNGRLAMIGIAGML QEL+N  DIL
Sbjct:    5 QMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKM-SAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

[Close]

BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 1.440e-103
Identity = 161/219 (73.52%), Postives = 184/219 (84.02%), Query Frame = 0

Query:    6 STQLFLGTAATLIASSTAFVAPMTVRSVAPSSS---LKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 221
            S+ +FLGTAATLIASS AFV PM VRS AP+SS   LKM SAG+ Y+ TLPGA   +GKIFD L L++GA PG+IK WREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI  A+  PS VTGEGGL+D YSPGDLGFDP  +KPK +A L  MQ KELNNGRLAMIGI GMLVQEL+N  DILG
Sbjct:    4 SSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKM-SAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.750e-99
Identity = 141/161 (87.58%), Postives = 151/161 (93.79%), Query Frame = 0

Query:   61 KIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 221
            +IFDPLGLS+GAAPGDIKKWREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAF+EYNTIMTAF+TPSAVTGEGGLK+ Y PGDLGFDPL LKP  EA L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 5.620e-97
Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 0

Query:   61 KIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 221
            +IFDPLGLS+GAAPGDIKKWREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLK+ Y PGDLGFDPL LKP  EA L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

[Close]

BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 1.690e-96
Identity = 159/216 (73.61%), Postives = 167/216 (77.31%), Query Frame = 0

Query:    8 QLFLGTAATLIASSTAFVAPMTVRSVA--PSSSLKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 221
            Q+F+GTAATLIASSTAFVAPM VRSV   PSS     SAGS YV TLPGAPFSDGKIFDPLGLS+GAAPGDIKKWREAEIKHGRVAMLASLGV+VAE                            FW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLK+ Y PGDLGFDPL LKP  EA L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

[Close]

BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 4.250e-89
Identity = 130/160 (81.25%), Postives = 140/160 (87.50%), Query Frame = 0

Query:   61 KIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 220
            KIFDPLGL++GA  GDIK WREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFW FSLL +A IEYNTI  A+  PS VTGEGGL+D YSPGDLGFDPL LKP  +  L TMQTKELNNGRLAMIGIAG LVQEL+NP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

[Close]

BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 5.200e-85
Identity = 133/218 (61.01%), Postives = 163/218 (74.77%), Query Frame = 0

Query:    5 TSTQLFLGTAATLIASSTAFVAPM-TVRSVAPSSSLKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 221
            TST   +G A+   AS  AF+ P  T  S  P+S+    SAGS YV TLPGAPF+DGK++DP+GLS  A P DIKKWREAEIKHGRVAMLAS+GVLVAE +HP F+GPDYIGPA+ HF+EI+A++P+FW  +LL +A++EY  I   F     VTGEGG++  Y PGDLGFDPLGL P+ E +L  M+TKELN+GRLAMIGI GM+VQEL+ P  I G
Sbjct:   54 TSTGALVGMASWCFASCEAFIVPTPTTLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

[Close]

BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 8.350e-75
Identity = 131/221 (59.28%), Postives = 161/221 (72.85%), Query Frame = 0

Query:    8 QLFLGTAATLIASSTAFVAPM-----TVRSVAPSSSLKMQSAGSAYVETLPGAPF---SDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 220
            QLFLGTAATLIASS AFVAP+     ++  VA SS+ KM +AGS Y  +LPGAPF   ++GK FDP GL+    P  IKKWREAE+KHGRV+MLA++G+LV+E +HP FMGP YIGPAV+H Q+I+  YP FWV SL  +AFIE  TI  A+ T S VTG G LK  Y PGDLGFDPLGL PK   D   +Q++EL+ GR AMIG+ GM+VQE+++   IL
Sbjct:    5 QLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKM-TAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6639.15366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7Q6_ECTSI	9.080e-126	87.61	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S1_ECTSI	9.560e-119	81.74	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	5.030e-117	82.41	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	1.440e-103	73.52	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	1.750e-99	87.58	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	5.620e-97	88.20	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5K8D0_9PHAE	1.690e-96	73.61	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
D7G7Q7_ECTSI	4.250e-89	81.25	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G5B4_ECTSI	5.200e-85	61.01	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7FQG7_ECTSI	8.350e-75	59.28	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 34..220 e-value: 1.0E-36 score: 128.4
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 52..212 e-value: 2.4E-37 score: 129.0
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 13..215
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 13..215
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..221
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.545
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 59..220

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6639	contig	L-elsbetiae_contig6639:5951..7826 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6639.15366.1	mRNA_L-elsbetiae_contig6639.15366.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6639 5916..8298 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6639.15366.1 ID=prot_L-elsbetiae_contig6639.15366.1|Name=mRNA_L-elsbetiae_contig6639.15366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp
MTLGTSTQLFLGTAATLIASSTAFVAPMTVRSVAPSSSLKMQSAGSAYVE
TLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLV
AEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTA
FETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRL
AMIGIAGMLVQELINPADILG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln