prot_L-elsbetiae_contig6634.15359.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6634.15359.1
Unique Nameprot_L-elsbetiae_contig6634.15359.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length207
Homology
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: D8LIY1_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIY1_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 2.900e-89
Identity = 154/204 (75.49%), Postives = 171/204 (83.82%), Query Frame = 0
Query:    3 MGALASFLRAVTLLLCLCAGRSFVVLPTA--HGAARRAASAPAAATPAARSRPVIAPGVTQTQQKTSRTSRWLSMSSA-DQDVSTGGGTGTGVQTIVKDKVKQMEETEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGDGDXXXG 203
            M ++A FL+AV L LCLCAGR+FV LPTA   G ARRA +  AA +     +PV   G+TQ  Q+ S+ SRWLSMSSA DQDVSTGGGTGTGVQTIVK+KVK+M E + KE+LDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHK+GKATVTQAWKSKSESYCLQLQQCGLTASIAPD+KFEG G+   G
Sbjct:    1 MASVARFLKAVALWLCLCAGRAFVALPTAAPRGVARRAVTGDAARS----QQPVGCCGLTQ--QRVSQRSRWLSMSSATDQDVSTGGGTGTGVQTIVKEKVKEMVEVDNKEELDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKSGKATVTQAWKSKSESYCLQLQQCGLTASIAPDSKFEGGGEGAGG 198          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A835ZHY3_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY3_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.390e-47
Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = 0
Query:   89 GTGVQTIVKDKVKQMEETEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGDGD 199
            G  V+  V+DKV++      KE LDKE+WWRVILHND+IHTFDYVT SITKVVKKLTMK AYE+TMETHKAGKATVTQAWKS++E+YCL LQQCGLTASIAPD+KF   GD
Sbjct:    9 GCRVKEKVEDKVQR------KEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKFGKGGD 113          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A835ZBL6_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL6_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.510e-45
Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 0
Query:   86 GGTGTGVQTIVKDKVKQM--EETEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIA 189
            G   TG   +VKD+VK+   ++ + KE LDKE+WWRVILHND+IHTFDYVT SITKVVKKLTMK AYE+TMETHKAGKATVTQAWKS++E+YCL LQQCGLTASIA
Sbjct:   45 GSPSTGTSVLVKDRVKEKVEDQVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIA 150          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A7S2GQ17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ17_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.200e-35
Identity = 68/109 (62.39%), Postives = 79/109 (72.48%), Query Frame = 0
Query:   89 GTGVQTIVKDKVKQMEETEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGD 197
            G GVQTI  DKV    E +EKEDL++E WWRV+LHNDEIHTF+YVT++I K+  +LT KKAY +T  TH AG ATVT  WKS +E  CL LQ  GLT SIAPD KF  D
Sbjct:   17 GAGVQTITIDKVDN--EVQEKEDLNEEGWWRVLLHNDEIHTFEYVTEAIVKICPQLTRKKAYMITRTTHGAGVATVTTVWKSLAEQMCLGLQTFGLTVSIAPDAKFNDD 123          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A7S2W133_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W133_9STRA)

HSP 1 Score: 124 bits (310), Expect = 6.330e-33
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0
Query:   89 GTGVQTIVKDKVKQMEETEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGDGDXXXGGEG 206
            G GV TI  D+     + EEK DLDKE WWRV+LHNDEIHTF+YVT+++ KVV ++T +KA+++T  TH +G +T+T  WKS +E  C+ LQ  GLT SIAPD  FE   D   GG G
Sbjct:    7 GRGVTTITIDRTDTDTKVEEKMDLDKEGWWRVLLHNDEIHTFEYVTEALVKVVPQITKRKAFQITRRTHMSGVSTITTVWKSLAEQMCMGLQTFGLTVSIAPDEDFE---DNREGGGG 121          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A7S1RIS0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RIS0_ALECA)

HSP 1 Score: 125 bits (314), Expect = 1.410e-32
Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = 0
Query:  109 KEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGD 197
            KE  DKE+WWRV+LHND+IHTF+YVT  +T++V  LT +KAY +T E H +GKATV   WKS SE YC+ LQQ GLT SIAPD+KFEG+
Sbjct:  105 KEQFDKEKWWRVLLHNDDIHTFEYVTGCLTRIVPHLTRRKAYNITWEAHSSGKATVACVWKSLSEQYCVNLQQLGLTVSIAPDSKFEGN 193          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A813J9Y2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J9Y2_POLGL)

HSP 1 Score: 124 bits (311), Expect = 9.420e-32
Identity = 60/102 (58.82%), Postives = 79/102 (77.45%), Query Frame = 0
Query:   96 VKDKVKQMEETEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGD 197
            V DKV    +T  KE+ +KE+WWRV+LHND+IHTF+YVT  +TKVV+ LT +KAY +T E H +GKATV   WK+ +E +C++LQQ GLT SIAPD+KFEG+
Sbjct:  128 VMDKVDM--KTRMKEEFEKEKWWRVLLHNDDIHTFEYVTNCLTKVVQHLTRRKAYNITWEAHSSGKATVACVWKALAEQFCVKLQQDGLTVSIAPDSKFEGN 227          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A812W203_9DINO (CPLS1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812W203_9DINO)

HSP 1 Score: 119 bits (299), Expect = 1.030e-30
Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 0
Query:  106 TEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGD 197
            T+ KE  +KE+WWRV+LHND+IHTF+YVT  + KVV+ L+ +KAY +T E H +GKATV   WK+ +E +C++LQQ GLT SIAPD+KFEG+
Sbjct:   71 TQMKEQFEKEKWWRVLLHNDDIHTFEYVTNCLVKVVQHLSRRKAYGITWEAHSSGKATVACVWKALAEQFCVKLQQDGLTVSIAPDSKFEGN 162          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A7S1TWE5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWE5_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.940e-30
Identity = 59/104 (56.73%), Postives = 77/104 (74.04%), Query Frame = 0
Query:   92 VQTIVKDKVKQMEETEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFE 195
            V+TI  DKV +  E ++KEDLDKEQWWRV+LHNDEIHTF+YV + I   V  +T +KA+++ M TH+ G+ATV   WK  +E YCL LQ+ GLT+SIAPD  F+
Sbjct:   56 VKTI--DKVDEKVEEKQKEDLDKEQWWRVLLHNDEIHTFEYVIEEIVGTVPTVTRRKAFDMAMTTHRDGQATVAIVWKKLAEQYCLGLQKAGLTSSIAPDANFK 157          
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Match: A0A7S3M2P1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2P1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 7.320e-30
Identity = 54/89 (60.67%), Postives = 70/89 (78.65%), Query Frame = 0
Query:  109 KEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGD 197
            KE  DKE+WWRV+LHND+IHTF+YVT  +T+  + L+ +KAY +T E H AGKATV+  WKS +E  C++LQQ GLT SIAPD+KFEG+
Sbjct:  163 KEQFDKEKWWRVLLHNDDIHTFEYVTSCLTRTCQHLSRRKAYNITWEAHSAGKATVSCVWKSLAEQQCVKLQQLGLTTSIAPDSKFEGN 251          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6634.15359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIY1_ECTSI2.900e-8975.49ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZHY3_9STRA4.390e-4774.77Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
A0A835ZBL6_9STRA1.510e-4574.53Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
A0A7S2GQ17_9STRA3.200e-3562.39Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W133_9STRA6.330e-3353.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1RIS0_ALECA1.410e-3264.04Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A813J9Y2_POLGL9.420e-3258.82Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A812W203_9DINO1.030e-3058.70CPLS1 protein n=2 Tax=Symbiodinium TaxID=2949 RepI... [more]
A0A7S1TWE5_9STRA1.940e-3056.73Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3M2P1_9STRA7.320e-3060.67Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 115..181
e-value: 1.7E-16
score: 59.7
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 93..188
e-value: 1.6E-12
score: 48.9
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 111..190
NoneNo IPR availablePANTHERPTHR33473FAMILY NOT NAMEDcoord: 62..193
NoneNo IPR availablePANTHERPTHR33473:SF1ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 62..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6634contigL-elsbetiae_contig6634:2364..8343 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6634.15359.1mRNA_L-elsbetiae_contig6634.15359.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6634 2364..8368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6634.15359.1 ID=prot_L-elsbetiae_contig6634.15359.1|Name=mRNA_L-elsbetiae_contig6634.15359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
MEMGALASFLRAVTLLLCLCAGRSFVVLPTAHGAARRAASAPAAATPAAR
SRPVIAPGVTQTQQKTSRTSRWLSMSSADQDVSTGGGTGTGVQTIVKDKV
KQMEETEEKEDLDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAY
EVTMETHKAGKATVTQAWKSKSESYCLQLQQCGLTASIAPDNKFEGDGDG
EGGGEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like