prot_L-elsbetiae_contig6604.15326.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6604.15326.1
Unique Nameprot_L-elsbetiae_contig6604.15326.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length169
Homology
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BLAST of mRNA_L-elsbetiae_contig6604.15326.1 vs. uniprot
Match: D8LQ44_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ44_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.100e-43
Identity = 113/173 (65.32%), Postives = 132/173 (76.30%), Query Frame = 0 
Query:    1 MRQRLSRDLFSSVVDSLVEGAPQLDGVEWESVILVMTLFTTFGLGSTSRRT---TVDDSLRQKLLSLPGVMAKDVSEMEGVLKSKSNDTRTQKEAVRDLLRRATLVSQSAAGRNPKK--EARGGFWKDNRGRSGGGKGQXXXXXXXXXXXXXXXXXXXXXXPDNPSSDILWRR 168
            M+QRLSRDLFS VVD+LV GAPQL G+EWE+V LV TL+ +FGL     RT   T DDSLR+KL SL GV+ +DVS M+  L+S+S+DTRTQKEAVRD+LRRATLV+Q++AGR   K   A   FWKDN+GRSGG KGQ       XXXXXXXXXXXXXXXP   SSDILW+R
Sbjct: 1119 MKQRLSRDLFSGVVDALVAGAPQLQGMEWEAVTLVKTLYVSFGLSGARNRTRGSTSDDSLRKKLQSLAGVLEQDVSTMDAKLRSESSDTRTQKEAVRDVLRRATLVAQNSAGRGGGKGSNASATFWKDNKGRSGGAKGQPNKSSNRXXXXXXXXXXXXXXXP---SSDILWQR 1288
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6604.15326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ44_ECTSI3.100e-4365.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6604contigL-elsbetiae_contig6604:6306..10731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6604.15326.1mRNA_L-elsbetiae_contig6604.15326.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6604 4611..10797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6604.15326.1 ID=prot_L-elsbetiae_contig6604.15326.1|Name=mRNA_L-elsbetiae_contig6604.15326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp
MRQRLSRDLFSSVVDSLVEGAPQLDGVEWESVILVMTLFTTFGLGSTSRR
TTVDDSLRQKLLSLPGVMAKDVSEMEGVLKSKSNDTRTQKEAVRDLLRRA
TLVSQSAAGRNPKKEARGGFWKDNRGRSGGGKGQQQQQNHRSHRNRNKRN
GHNDQDPDNPSSDILWRR*
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