prot_L-elsbetiae_contig656.15256.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig656.15256.1
Unique Nameprot_L-elsbetiae_contig656.15256.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length234
Homology
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BLAST of mRNA_L-elsbetiae_contig656.15256.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 4.900e-38
Identity = 88/119 (73.95%), Postives = 96/119 (80.67%), Query Frame = 0 
Query:   38 DVIRVVLREVEVHAWPPNWRHEVQCPGVRVTVIDDMEGRDMPLLRAEVGSLDMTHESGPGMARYSSSAGARASLQH---ATSAGSTTGG----SAGGVAGLEGAITVPVSRTAAACDAQ 149
            DVIR+VLREVEVHAWPPNWRHEVQCPGVRVTVIDD+EGRDMPLLRAEVGSLDMTHESGPGMAR+S+    RASL     AT+AG T+      +AGGV      + VPVSRTAAACDAQ
Sbjct: 4068 DVIRLVLREVEVHAWPPNWRHEVQCPGVRVTVIDDLEGRDMPLLRAEVGSLDMTHESGPGMARHSAGD-KRASLGKSILATTAGGTSAXXXXRTAGGVD--TALLVVPVSRTAAACDAQ 4183
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BLAST of mRNA_L-elsbetiae_contig656.15256.1 vs. uniprot
Match: D7FMF6_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF6_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 7.870e-16
Identity = 49/77 (63.64%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:  150 VDYYNATGGRWEPLLERVVAQGDREIANRRPPPLLGGPATRTLGGKVVEAGGFEEEREDDGETCSVVRLSCFEEDVK 226
            VDYYNATGGRWEPLLERVVAQGDR I  RR    +      T+ G V   GG  EE     E+CSVVRLSCFEEDVK
Sbjct:    2 VDYYNATGGRWEPLLERVVAQGDRAIVTRR---RVAAQDPNTVTGVV--GGGQGEEGXXXXESCSVVRLSCFEEDVK 73
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig656.15256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMF5_ECTSI4.900e-3873.95FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FMF6_ECTSI7.870e-1663.64SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig656contigL-elsbetiae_contig656:16426..18827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig656.15256.1mRNA_L-elsbetiae_contig656.15256.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig656 16426..18827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig656.15256.1 ID=prot_L-elsbetiae_contig656.15256.1|Name=mRNA_L-elsbetiae_contig656.15256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=234bp
RRQRHQLLLSSGGGRGKRSGAGRSSGGRGGGGGGGPRDVIRVVLREVEVH
AWPPNWRHEVQCPGVRVTVIDDMEGRDMPLLRAEVGSLDMTHESGPGMAR
YSSSAGARASLQHATSAGSTTGGSAGGVAGLEGAITVPVSRTAAACDAQV
DYYNATGGRWEPLLERVVAQGDREIANRRPPPLLGGPATRTLGGKVVEAG
GFEEEREDDGETCSVVRLSCFEEDVKVGGPSPG*
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