prot_L-elsbetiae_contig6556.15251.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6556.15251.1
Unique Nameprot_L-elsbetiae_contig6556.15251.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
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BLAST of mRNA_L-elsbetiae_contig6556.15251.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 7.140e-32
Identity = 75/94 (79.79%), Postives = 82/94 (87.23%), Query Frame = 0 
Query:    1 AAVDSHSLTQGAMKLVYLLAIQVATSGEESAGRGA--SASSHSSARPPSRAPQLVRARSGPATLSHAVFEMLYVELRGVLGGLRQARTARARDR 92
            AA +SHSLTQGAMKLVYLLAIQVATSGEE+ G G+  SAS HS A  P RAPQLVRARSGPATLSHAVFEMLYV+LR VLGGLR+AR +RAR+R
Sbjct: 3473 AAAESHSLTQGAMKLVYLLAIQVATSGEEAGGSGSGISASDHS-APGPFRAPQLVRARSGPATLSHAVFEMLYVQLRNVLGGLRKARASRARER 3565
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BLAST of mRNA_L-elsbetiae_contig6556.15251.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.160e-25
Identity = 66/80 (82.50%), Postives = 70/80 (87.50%), Query Frame = 0 
Query:    1 AAVDSHSLTQGAMKLVYLLAIQVATSGEESAGRGA--SASSHSSARPPSRAPQLVRARSGPATLSHAVFEMLYVELRGVL 78
            AA +SHSLTQGAMKLVYLLAIQVATSGEE+AG G+  SAS HS A  P RAPQLVRARSGPATLSHAVFEMLYV+LR VL
Sbjct: 3162 AAAESHSLTQGAMKLVYLLAIQVATSGEEAAGGGSGISASDHS-APGPFRAPQLVRARSGPATLSHAVFEMLYVQLRNVL 3240
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BLAST of mRNA_L-elsbetiae_contig6556.15251.1 vs. uniprot
Match: A0A7S3UZV6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZV6_HETAK)

HSP 1 Score: 51.2 bits (121), Expect = 3.390e-6
Identity = 41/94 (43.62%), Postives = 51/94 (54.26%), Query Frame = 0 
Query:    8 LTQGAMKLVYLLAIQVATSGE-----ESAGRGAS--------ASSHSSARPPSRAPQLVRARSGPATLSHAVFEMLYVELRGVLGGLRQARTAR 88
            LT+ AMKL+YLLA+QVATSGE      S  R  S         +S +   PP  A  L R  SGPATLS +VF +LY +L   L     + +AR
Sbjct:    1 LTRAAMKLLYLLALQVATSGEGTRNSSSLQRSTSWGSMGFGQVTSLAGPPPPPAALTLQRTMSGPATLSQSVFTLLYTQLSSALEACTPSLSAR 94
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6556.15251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KT07_9PHAE7.140e-3279.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCZ5_ECTSI1.160e-2582.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UZV6_HETAK3.390e-643.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6556contigL-elsbetiae_contig6556:3707..4376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6556.15251.1mRNA_L-elsbetiae_contig6556.15251.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6556 3707..4376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6556.15251.1 ID=prot_L-elsbetiae_contig6556.15251.1|Name=mRNA_L-elsbetiae_contig6556.15251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
AAVDSHSLTQGAMKLVYLLAIQVATSGEESAGRGASASSHSSARPPSRAP
QLVRARSGPATLSHAVFEMLYVELRGVLGGLRQARTARARDR
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