prot_L-elsbetiae_contig6553.15249.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6553.15249.1
Unique Nameprot_L-elsbetiae_contig6553.15249.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length516
Homology
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BLAST of mRNA_L-elsbetiae_contig6553.15249.1 vs. uniprot
Match: D8LRX6_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX6_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 1.870e-63
Identity = 307/548 (56.02%), Postives = 333/548 (60.77%), Query Frame = 0 
Query:    1 MSTVGLQFVDLHSVAKQNDILGLVKLLEEGAHIDKRDPYGYTPLHWACQKGHTHTVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAAKDLRGRTSAAVCDMGLYDVDQCSVKDGILDLLKNGPALQLEDSQAAASTTTMIATPAXXXXXPVAAAXXXPXAPAALPDAALPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGVFALWDTSLGPAPIGRTGSHGSGLMDEQWTDAEDAQWNEMWALLHVPDPDNPDNNLYSEVKTLRKDVKRLRSDLNEGASD------------------------------YDGVF-----PGEAPPAAKDVEGAPPAAAT-----ATENLKGVSTDSAAGLMGSMSVSDVEEVAPASAGGIPSGTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGRTGEDALREQLANQNRLLAAMAKELEILKRERERKEGGGGPGAVNGRGVGGTAVGGSAALPV 508
            M+  GLQFVDLHS AKQ+DI+ +VKLLEEGA IDKRDPYGYTPL              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD AA DLRGRTSAAVCDMGLYDVDQ SVKD I+ LLKN P  QLE    A+  + M+A P XXXXX     XXX X      +  L   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GVFALWDTSLGP   G  G    G++D+ WTD EDA WNEMWA+LHVPDPDNPDNNLYSEVKTLR DVKRLRSDLNE AS+                               +G+F     P EA  +      +P  A T     A +++ G S DS  GL G MSVS  +  A  +A    +  +                                          AG  GE  LREQL  QNRLLA MAKELE L+RE        G  A N  G GG    GSA LPV
Sbjct:    1 MAAAGLQFVDLHSAAKQDDIMAVVKLLEEGAPIDKRDPYGYTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQ-SVKDRIIQLLKNPPVRQLEAPPTASPASAMLALPXXXXXXXXXXXXXXXXXXXGA-NPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVENGVFALWDTSLGPG-AGDAGP--GGMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASXXXXXXXXXXXXXXXXXXXXXXXTANLEGLFGISSAPAEASSSPSGGATSPATAVTDAPVVAPKSVTGSSEDSTTGLFGDMSVSARDASADGTAAQEGASPNSVGGGGRRTDGGMVSVPPAKRPRSTAAAEVGGIVGDSAGAEGAGSMGETELREQLTRQNRLLAEMAKELEGLRREMS------GGAAGNRSGSGGDMGEGSAVLPV 537
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6553.15249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRX6_ECTSI1.870e-6356.02Chain A, Crystal Structure Of A Designed Full Cons... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 450..484
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 10..105
coord: 69..153
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 121..135
score: 42.47
coord: 40..55
score: 40.56
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 6..35
e-value: 3000.0
score: 1.5
coord: 72..101
e-value: 5.8E-5
score: 32.5
coord: 105..134
e-value: 8.9E-5
score: 31.9
coord: 39..68
e-value: 5.0E-7
score: 39.3
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 106..136
e-value: 1.5E-5
score: 25.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 72..104
score: 13.01
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 105..137
score: 12.048
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 39..71
score: 14.212
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 11..102
e-value: 7.3E-17
score: 61.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 11..141
score: 41.911
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 7..158
e-value: 4.8E-46
score: 158.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 11..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6553contigL-elsbetiae_contig6553:1775..8446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6553.15249.1mRNA_L-elsbetiae_contig6553.15249.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6553 1775..8446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6553.15249.1 ID=prot_L-elsbetiae_contig6553.15249.1|Name=mRNA_L-elsbetiae_contig6553.15249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=516bp
MSTVGLQFVDLHSVAKQNDILGLVKLLEEGAHIDKRDPYGYTPLHWACQK
GHTHTVQALLAAGASVHLRDKWRRTPLHRAAKEGHKDVVAALLRSGAEVN
AQGDNNWTPLHCSSFHGKLEIVEMLLRHGADHAAKDLRGRTSAAVCDMGL
YDVDQCSVKDGILDLLKNGPALQLEDSQAAASTTTMIATPAPAPAPPVAA
AAAAPAAPAALPDAALPAVPPAAAAAAAAAAAAAAAASKVAAAAASAATA
ASAATGVFALWDTSLGPAPIGRTGSHGSGLMDEQWTDAEDAQWNEMWALL
HVPDPDNPDNNLYSEVKTLRKDVKRLRSDLNEGASDYDGVFPGEAPPAAK
DVEGAPPAAATATENLKGVSTDSAAGLMGSMSVSDVEEVAPASAGGIPSG
TSGGGGGALRSTQRSRAKRHKVVAGGGGGGRAAAGGGGGGGGGDAGRTGE
DALREQLANQNRLLAAMAKELEILKRERERKEGGGGPGAVNGRGVGGTAV
GGSAALPVSCTAVRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf