prot_L-elsbetiae_contig6548.15246.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6548.15246.1
Unique Nameprot_L-elsbetiae_contig6548.15246.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length178
Homology
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BLAST of mRNA_L-elsbetiae_contig6548.15246.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.100e-20
Identity = 87/118 (73.73%), Postives = 88/118 (74.58%), Query Frame = 0 
Query:   16 AGKALAERMARQREEEERIRKLXXXXXXXXXXXXXXXXXARKAIEDEKARKRAKAKEKLDRKKKEGTYKTXXXXXXEARAEAAKAAMLAAGLEVPSAPAGGXXXXXXXXXXXXVYGKR 133
            AGK LAERMARQREEEERIRK+XXXXXXXXXXXXXXXXX        KARKRAKAKEKLDRKKKEGTYKT      EARAEAAKAAMLAAGLEVPS P  G            VYGKR
Sbjct:  183 AGKLLAERMARQREEEERIRKIXXXXXXXXXXXXXXXXXXXXXXXXXKARKRAKAKEKLDRKKKEGTYKTKKQKEQEARAEAAKAAMLAAGLEVPSVPTDGATAGGGKKSKI-VYGKR 299
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6548.15246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4N8_9PHAE2.100e-2073.73Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6548contigL-elsbetiae_contig6548:942..6081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6548.15246.1mRNA_L-elsbetiae_contig6548.15246.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6548 941..6081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6548.15246.1 ID=prot_L-elsbetiae_contig6548.15246.1|Name=mRNA_L-elsbetiae_contig6548.15246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp
DKKEDDEEKKPKQSAAGKALAERMARQREEEERIRKLEEEEARLIAEEEA
KEAAARKAIEDEKARKRAKAKEKLDRKKKEGTYKTKKQKEQEARAEAAKA
AMLAAGLEVPSAPAGGAGAAGGGKKSKIVYGKRKPANKSKPAAAAAAAAA
AAADTPPPPPTSDDATKAKKAQEEKEKE
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