prot_L-elsbetiae_contig651.15204.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig651.15204.1
Unique Nameprot_L-elsbetiae_contig651.15204.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig651.15204.1 vs. uniprot
Match: D8LN47_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN47_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.680e-9
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 0 
Query:    1 QTAVEAISKSRKKAGEALGRMKARGKNIARSKTQRSSGNGPGSPLALSKMRNAVAQVQAKNAASTTAARDSGKPRLRILAERLLGQHR 88
            +TAV++ISKSR KAGEALG+MKARGK  ++  ++  S  GPG P ++  MRNA+A V+A   A+T       KP++  L ERL+ ++R
Sbjct:  719 KTAVKSISKSRMKAGEALGKMKARGKKFSKGNSR--STRGPG-PRSMKTMRNAIAAVKANPRAATGRETREKKPKMASLVERLMRKYR 803
[Close]
BLAST of mRNA_L-elsbetiae_contig651.15204.1 vs. uniprot
Match: A0A6H5JMZ2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ2_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.670e-8
Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    3 AVEAISKSRKKAGEALGRMKARGKNIARSKTQRSSGNGPGSPLALSKMRNAVAQVQAKNAASTTAARDSGKPRLRILAERLLGQHR 88
            AV++IS SR KAGEALG+MKARGKN ++  ++  S  GP +P ++  MRN VA V+A   A+T       KP++ IL ERL+ ++R
Sbjct:  364 AVKSISTSRMKAGEALGKMKARGKNFSKGNSR--SIRGP-APRSMKTMRNTVAAVKANPRAATGRETREKKPKMEILVERLMRKYR 446
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig651.15204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN47_ECTSI1.680e-947.73Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5JMZ2_9PHAE2.670e-847.67Cyclic nucleotide-binding domain-containing protei... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig651contigL-elsbetiae_contig651:29868..30134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig651.15204.1mRNA_L-elsbetiae_contig651.15204.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig651 29868..30134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig651.15204.1 ID=prot_L-elsbetiae_contig651.15204.1|Name=mRNA_L-elsbetiae_contig651.15204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
QTAVEAISKSRKKAGEALGRMKARGKNIARSKTQRSSGNGPGSPLALSKM
RNAVAQVQAKNAASTTAARDSGKPRLRILAERLLGQHR*
back to top