prot_L-elsbetiae_contig6499.15178.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6499.15178.1
Unique Nameprot_L-elsbetiae_contig6499.15178.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length87
Homology
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A6H5L234_9PHAE (SpoU_methylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L234_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.320e-43
Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAK--RQGGAGHVLVGVEQTNNS 87
            MCASLVDKVPN+AGLARTSEIFAATKLVVPD RV+K+PAF+KISTGAEQWLP+EEVGEEQLVAWLRR K  R GG GHVLVG+EQTNNS
Sbjct:  340 MCASLVDKVPNIAGLARTSEIFAATKLVVPDLRVMKSPAFTKISTGAEQWLPVEEVGEEQLVAWLRRVKKRRAGGGGHVLVGIEQTNNS 428          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A1E7EQ52_9STRA (tRNA/rRNA methyltransferase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQ52_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.270e-24
Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            +CASLVDK+PNLAGLARTSEIFAA  LV+PD  V K   F  IS GA  W+ IEEV  EQL++WL + K +G   + +VG+EQT++S
Sbjct:    6 ICASLVDKIPNLAGLARTSEIFAAKSLVIPDLSVTKMDNFKSISVGAADWINIEEVKIEQLLSWLLKKKAEG---YWIVGLEQTSSS 89          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A7S0GN51_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GN51_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.800e-24
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            +CASL+DK+PNLAGLART+EIFAA KL+VPD RV K   F  IS GA +W+ IEE  E  L+ WL + K +    + +VG+EQT++S
Sbjct:   10 VCASLIDKIPNLAGLARTAEIFAAQKLIVPDLRVQKMDNFKSISVGANEWITIEECPERDLLDWLLKRKEEC---YTIVGIEQTSSS 93          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A1E7FTV0_9STRA (Alpha/beta knot n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTV0_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.620e-23
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            +CASLVDK+PNL GLARTSEIFAA  L+VPD  V K   F  IS GA  W+ I+EV EE L+ WL + K +G   + +VG+EQT++S
Sbjct:   37 VCASLVDKIPNLGGLARTSEIFAAQSLIVPDLSVTKMDIFQSISVGAADWIDIQEVKEEALLLWLLQKKTEG---YWIVGLEQTSSS 120          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A7S4N1C3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1C3_9STRA)

HSP 1 Score: 100 bits (250), Expect = 6.370e-23
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            +CASL+DKVPNLAGLART+EIFAA +LVVPD  V K   F  IS  AE+W+ IEE  E  L++WL + K++G   + +VGVEQT++S
Sbjct: 1412 VCASLIDKVPNLAGLARTAEIFAADRLVVPDQSVRKMDNFKSISVSAEEWIRIEECKERDLLSWLNKRKQEG---YTIVGVEQTSSS 1495          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: W7U0J8_9STRA (Rrna methylase family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0J8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 8.530e-23
Identity = 48/87 (55.17%), Postives = 70/87 (80.46%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            MCASL+++VPNLAGLART EIFA +KLV+PD R+L++P F KIS+ A +W+ IEEV E +  A+++R K++G   + +VG+EQT++S
Sbjct:  663 MCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEG---YTIVGLEQTDDS 746          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A7S2RYK0_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RYK0_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.090e-22
Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            +CASL+DKVPNLAGLART+EIFAA +L++PD  V K   F  IS GA +W+ IEE  E+ L++WL + K +G   + +VG+EQT++S
Sbjct: 1010 VCASLIDKVPNLAGLARTAEIFAADRLIIPDVGVCKMDNFKSISVGAGEWIKIEECKEKDLLSWLNQRKEEG---YNIVGIEQTSSS 1093          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A7S1ZWU9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZWU9_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 7.910e-22
Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            +CA+LVDKVPNLAGLART+EIFAA +LV+PD  V K   F  +S  A  W+ IEE  E+ L++WL+  +  G   + +VG+EQT++S
Sbjct:   44 ICATLVDKVPNLAGLARTAEIFAADRLVIPDTSVCKMDIFKSVSVSAGDWITIEECKEDGLLSWLKHQRENG---YKIVGLEQTSSS 127          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A7R9V1J9_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V1J9_9CHLO)

HSP 1 Score: 93.6 bits (231), Expect = 8.740e-22
Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            +CASL+DK+PNLAGLART E+F A+ L VPD RV  +PAF+ IS  AEQW+ + EV E  L+ WL R + +G   + L+G+EQT  S
Sbjct:   61 ICASLIDKLPNLAGLARTCEVFRASALAVPDLRVASDPAFASISVTAEQWVNMVEVKEGALLPWLLRKQAEG---YALLGLEQTAES 144          
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Match: A0A448ZHP1_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHP1_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 9.300e-21
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    1 MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQWLPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS 87
            +CASLVDKVPNLAGLART EIFAA  LVVPD  V K   F  IS GA  W+ +EEV EE L+ WL   K +G     +VG+EQT++S
Sbjct: 1758 VCASLVDKVPNLAGLARTCEIFAAQSLVVPDMSVAKMDNFQSISVGAVDWIDMEEVKEEGLLLWLLEKKTEG---FWIVGLEQTSSS 1841          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6499.15178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L234_9PHAE1.320e-4386.52SpoU_methylase domain-containing protein n=1 Tax=E... [more]
A0A1E7EQ52_9STRA1.270e-2458.62tRNA/rRNA methyltransferase (Fragment) n=1 Tax=Fra... [more]
A0A7S0GN51_9STRA3.800e-2455.17Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1E7FTV0_9STRA2.620e-2356.32Alpha/beta knot n=1 Tax=Fragilariopsis cylindrus C... [more]
A0A7S4N1C3_9STRA6.370e-2357.47Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
W7U0J8_9STRA8.530e-2355.17Rrna methylase family n=1 Tax=Nannochloropsis gadi... [more]
A0A7S2RYK0_9STRA4.090e-2254.02Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A7S1ZWU9_9STRA7.910e-2251.72Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9V1J9_9CHLO8.740e-2254.02Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A448ZHP1_9STRA9.300e-2158.62SpoU_methylase domain-containing protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 2..87
e-value: 1.7E-11
score: 46.2
NoneNo IPR availablePANTHERPTHR12029RNA METHYLTRANSFERASEcoord: 1..87
NoneNo IPR availablePANTHERPTHR12029:SF11METHYLTRANSFERASE TARBP1-RELATEDcoord: 1..87
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 6..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6499contigL-elsbetiae_contig6499:5373..6419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6499.15178.1mRNA_L-elsbetiae_contig6499.15178.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6499 5358..6419 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6499.15178.1 ID=prot_L-elsbetiae_contig6499.15178.1|Name=mRNA_L-elsbetiae_contig6499.15178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
MCASLVDKVPNLAGLARTSEIFAATKLVVPDARVLKNPAFSKISTGAEQW
LPIEEVGEEQLVAWLRRAKRQGGAGHVLVGVEQTNNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029026tRNA_m1G_MTases_N
IPR029028Alpha/beta_knot_MTases