prot_L-elsbetiae_contig6498.15176.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6498.15176.1
Unique Nameprot_L-elsbetiae_contig6498.15176.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length317
Homology
BLAST of mRNA_L-elsbetiae_contig6498.15176.1 vs. uniprot
Match: D8LFR8_ECTSI (SGF29 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFR8_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 9.970e-121
Identity = 232/323 (71.83%), Postives = 249/323 (77.09%), Query Frame = 0
Query:    1 MSGLPSALLAKWATPFDHETAKLKKYLPLGPYPNHLTQEKCVELHAIYRDAVNQTHELEGIVASRLNTLKRKRSRSGXXXXXXXXIQNGT-------EGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEKGRPGDGGSEAQSTKKRKGAATKDGRRSVLQGPAWATRTPKAGDQVAAKVEDEALWILATVEKHNEKKGFXXXXXXXXXXXKRRQFKLRRSNILTLPRPEEASGAIFPVGSRVMTLYPHTTTFYPATISGPFVEGRDGASDQCVLQFQDDDPTPDGVLPHWRLPARYVRLRA 316
            MSGLPSALL KWATPFDHETAKL+ +LPLGPYPNHLT++KC++LHAIYRDAVN T E+E IVAS+L+ LKRKRS+SG        IQN T       +             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   RKG + KD +RSV QGPAWATRTPKAGDQVAAKVEDEALWILATVEKHNEKKGF           KRRQFKLRRSNILTLPRPEEASGAIFPVGSRVMTLYP TTTFYPATISGPFVEGRDG  D CV+QFQDDDPTP+GVLPHWRLPAR+VR R+
Sbjct:    1 MSGLPSALLTKWATPFDHETAKLRAFLPLGPYPNHLTEDKCLKLHAIYRDAVNDTEEIESIVASKLSALKRKRSQSGST------IQNSTANAVGWDQAGGGTAEGRNTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGNSGKDSKRSVPQGPAWATRTPKAGDQVAAKVEDEALWILATVEKHNEKKGFFVVVDDDAGDGKRRQFKLRRSNILTLPRPEEASGAIFPVGSRVMTLYPQTTTFYPATISGPFVEGRDGRIDYCVMQFQDDDPTPEGVLPHWRLPARFVRYRS 317          
BLAST of mRNA_L-elsbetiae_contig6498.15176.1 vs. uniprot
Match: A0A835YH95_9STRA (SGF29 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH95_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.950e-13
Identity = 53/171 (30.99%), Postives = 74/171 (43.27%), Query Frame = 0
Query:  177 PAWATRTPKAGDQVAAKVEDEALWILA-TVEKHNEKKGFXXXXXXXXXXXKRRQ-----------------------FKLRRSNILTLPRPEEASGAIFPVGSRVMTLYPHTTTFYPATISGP-----------FVEGRDGASDQCVLQFQDDDPTPDGVLPHWRLPARYV 312
            PAW  R P+A D+ AA+V    LWIL   V +      F           + R                        + + R N++ L R  EASG  FP+ SRV+ +YP+TT+FY A I+GP                 G  D C++QF+DD+    G+     +PARYV
Sbjct:  175 PAWVHRVPQANDRCAARVAANNLWILTLVVSRDTATDTFTVADDDDAADVRARHGSFLLAAFCTSPRDNRSAAALAYYTVTRDNVMALAREGEASGDQFPLHSRVLAMYPNTTSFYKAQIAGPPQRRSAAXXXXXXXXXVGGGDLCLVQFEDDEDEVTGLARRHLVPARYV 345          
BLAST of mRNA_L-elsbetiae_contig6498.15176.1 vs. uniprot
Match: A0A7S2V2U9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2U9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.300e-12
Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 0
Query:  177 PAWATRTPKAGDQVAAKVEDEALWILATVEKHNEKKG-FXXXXXXXXXXXKRRQFKLRRSNILTLPRPEEASGA----IFPVGSRVMTLYPHTTTFYPATISGPFVEGRDGASDQCVLQFQDDDPTPDGVLPHWRLPARYVRL 314
            P    R P+  DQVAAKV    LWIL TV+KH+  +  +  XXXXXXXXX                    A+G+     +PVG+RV+ +YP TT+FY ATIS       DG  + CV+QF DDD    G LPH  +P R++ +
Sbjct:  125 PPHQLREPRINDQVAAKVSSHNLWILTTVKKHHASQDIWEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSGLAEHYPVGTRVLAMYPETTSFYQATISAGVFLSVDG-KELCVVQF-DDDEDETGQLPHREVPVRFIAV 265          
BLAST of mRNA_L-elsbetiae_contig6498.15176.1 vs. uniprot
Match: A0A4D9CZZ2_9STRA (SGF29 C-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZZ2_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.630e-5
Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = 0
Query:  187 GDQVAAKVEDEALWILATVEKHNEKKGFXXXXXXXXXXXKRRQFKLRRSNILTLPRP---------EEASGAIFPVGSRVMTLYPHTTTFYPATI 272
            G+QVAAK+ +EA W L TV  HN                +RR + + R++++ LPR          ++A   +FP  +RV  +YP TT+FYPA +
Sbjct:  215 GEQVAAKISEEAAWALTTVRVHNVVTD--KVEVTDLDDSRRRTYFVDRTHVVPLPREGGRXXXXXGQDAWARMFPRETRVFAMYPETTSFYPAVV 307          
BLAST of mRNA_L-elsbetiae_contig6498.15176.1 vs. uniprot
Match: UPI0006448AF7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448AF7)

HSP 1 Score: 55.8 bits (133), Expect = 3.540e-5
Identity = 46/142 (32.39%), Postives = 68/142 (47.89%), Query Frame = 0
Query:  177 PAWATRTPKA---GDQVAAKVEDEALWILATVEKHNEKKGFXXXXXXXXXXXKRRQFKLRRSNILTLPRPEEASGAIFPVGSRVMTLYPHTTTFYPATISGPFVEGRDGASDQCVLQFQDDDPTPDGVLPHWRLPARYVRLR 315
            PA +  TP++   G QVAAK +    WILA V   N K              K+  F +   +I+ LP    A    F   ++V+ ++P TTTFYPA + G   +     + Q  L F DDD   +G  P+ ++ A+YV L+
Sbjct:  207 PAPSAATPESIPIGTQVAAK-DRSNNWILAKVNSFNAKTQKYELIDEDEAESKK--FTVSLKDIIQLP-TTAALANTFATNTKVLAMFPDTTTFYPALVVGS--QKIKNKTTQYTLHF-DDDAGENGQTPNRKVAAQYVILK 341          
BLAST of mRNA_L-elsbetiae_contig6498.15176.1 vs. uniprot
Match: A0A7S1YT92_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YT92_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.550e-5
Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 0
Query:  185 KAGDQVAAKV---EDEALWILATVEKHNEKKGFXXXXXXXXXXXKRRQFKLRR---SNILTLPRPEEASGAIFPVGSRVMTLYPHTTTFYPATISG-PFVEGRDGASD----QCVLQFQDDDPTPDGVLPHWRLPARYV 312
            + G+QVAAKV   ++   WILA V++      F           +    KL R   ++++TL    E     F  G+RVM ++P TT+FY A +S  P  + +  +S     + +L+F+DD+       PH R+P+R+V
Sbjct:  301 RPGEQVAAKVTRTDENGSWILARVQR------FYADTDTYDVQDEDDTSKLIRLPWNHVMTLSTGAEGG---FNKGTRVMAIFPETTSFYSAVVSKQPVWKLQSNSSTPIVKELILKFEDDEDDNTSRTPHRRVPSRFV 430          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6498.15176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LFR8_ECTSI9.970e-12171.83SGF29 C-terminal domain-containing protein n=2 Tax... [more]
A0A835YH95_9STRA1.950e-1330.99SGF29 C-terminal domain-containing protein n=1 Tax... [more]
A0A7S2V2U9_9STRA1.300e-1241.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CZZ2_9STRA1.630e-534.74SGF29 C-terminal domain-containing protein n=1 Tax... [more]
UPI0006448AF73.540e-532.39hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A7S1YT92_9STRA4.550e-530.94Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 188..242
e-value: 1.1E-5
score: 27.2
NoneNo IPR availableGENE3D2.30.30.140coord: 243..315
e-value: 2.9E-11
score: 45.2
NoneNo IPR availablePANTHERPTHR21539:SF0SAGA-ASSOCIATED FACTOR 29coord: 43..312
IPR010750SGF29 tudor-like domainPFAMPF07039DUF1325coord: 187..297
e-value: 1.6E-22
score: 80.0
IPR010750SGF29 tudor-like domainPROSITEPS51518SGF29_Ccoord: 180..316
score: 44.571
IPR037802SAGA-associated factor 29PANTHERPTHR21539UNCHARACTERIZEDcoord: 43..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6498contigL-elsbetiae_contig6498:4114..9456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6498.15176.1mRNA_L-elsbetiae_contig6498.15176.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6498 3037..9456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6498.15176.1 ID=prot_L-elsbetiae_contig6498.15176.1|Name=mRNA_L-elsbetiae_contig6498.15176.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp
MSGLPSALLAKWATPFDHETAKLKKYLPLGPYPNHLTQEKCVELHAIYRD
AVNQTHELEGIVASRLNTLKRKRSRSGGGGGGGSTIQNGTEGPAATTSGS
SSTGGVTGTGGVGGGGGGGGGGGGGGGAKDKQVPTQQKKKKRIEKGRPGD
GGSEAQSTKKRKGAATKDGRRSVLQGPAWATRTPKAGDQVAAKVEDEALW
ILATVEKHNEKKGFFVVVDDDAGDDKRRQFKLRRSNILTLPRPEEASGAI
FPVGSRVMTLYPHTTTFYPATISGPFVEGRDGASDQCVLQFQDDDPTPDG
VLPHWRLPARYVRLRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010750SGF29_tudor-like_dom
IPR037802SGF29