prot_L-elsbetiae_contig6469.15145.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6469.15145.1
Unique Nameprot_L-elsbetiae_contig6469.15145.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length356
Homology
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: D8LMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD5_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 9.320e-114
Identity = 232/326 (71.17%), Postives = 241/326 (73.93%), Query Frame = 0
Query:    3 RHGFANRSWTAGGAAAGGGNRTMTFGGRGGPGXXXXXXXXXXXXXXXXLGPAGPPGMDGMGPXXXXXXXXPSQRGXXFFXXXXXGMGRGRGPSGPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNEXXXXXXXXXXXXXXXXXXXXXXXXKRKRLRPSQKGVDAILDLGPEDAEEXXXXXXX--DPFGHDVYDVQAQPLGE 326
            RHGFANR WTA GA  G  NRTMTFGGRGG                   GPAG                           XXXX       P GP PPNY+CRRC +PGH I DCPT  DSS+DNTRLK+VVGIP SMIKL+DGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLS+SAP HLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASA+MSCPLCQTRGVGPDSLLPNE XXXXXXXXXXXXXXXXXXXXXXX        QKGVDAILDL P +   XXXXXXX  DPFG+DVYDVQAQPL E
Sbjct:    2 RHGFANRRWTADGAGTGP-NRTMTFGGRGG-------------------GPAG--------------------------GXXXXXXXXXXAPQGPLPPNYVCRRCFKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKGVDAILDLEPREXXXXXXXXXXXXDPFGNDVYDVQAQPLEE 281          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A6H5L225_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L225_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 9.220e-108
Identity = 208/359 (57.94%), Postives = 219/359 (61.00%), Query Frame = 0
Query:   11 WTAGGAAAGGGNRTMTFGGRGGPGXXXXXXXXXXXXXXXXLGPAGPPGMDGMGPXXXXXXXXPSQRGXXFFXXXXXGMGRGRGPSGPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNEXXXXXXXXXXXXXXXXXXXXXXXXKR-----------------------------------------KRLRPSQKGVDAILDLGP--EDAEEXXXXXXXDPFGHDVYDVQAQPLGE 326
            WTA GA  G  NRTMTFG  GGP               X  G   PPGMD MG                        +GR R P GP PPNY+CRRC +PGH I DCPT  DSS+DNTRLK+VVGIP SMIKL+DGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLS+SAP HLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASA+MSCPLCQ+RGVGPDSLLPNE                        +                                          KR R  QKGVDAILDL P  E    XXXXXXXDPFG+DVYDVQAQPL E
Sbjct:    4 WTADGAGTGP-NRTMTFGRPGGP----AGVGPGGRVGRXPAGVTAPPGMDSMG------------------------VGR-RAPQGPLPPNYVCRRCCKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQSRGVGPDSLLPNESLRAGVDEYLTRVTRESRGKAGNERAASERLQEDANRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKRLPQKGVDAILDLEPREEXXXXXXXXXXXDPFGNDVYDVQAQPLEE 332          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.780e-48
Identity = 86/160 (53.75%), Postives = 121/160 (75.62%), Query Frame = 0
Query:   94 PSGPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEF-GGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPN 252
            P   PPP Y+C+RCS+PGH++ DCPT GD ++DNTR K+++G+P +M+++A+ +++GGGLV+A G+ V +++N +AF KLK+  GGG     LLD+LS +AP HLKCP+C  I+ DAV++PCC  S CDSCVR AL A++ M CPLC   GV PD L+PN
Sbjct:  239 PGSAPPPAYVCKRCSKPGHYVKDCPTNGDPNYDNTRRKRILGVPSTMLQVAE-EQKGGGLVDAMGRRVVLKSNKEAFAKLKDLKGGGGGGAQLLDQLSAAAPEHLKCPLCRNIVQDAVLVPCCQGSACDSCVRDALAANS-MQCPLCSRPGVTPDQLIPN 396          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A2P4Y5F3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y5F3_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.990e-35
Identity = 78/181 (43.09%), Postives = 102/181 (56.35%), Query Frame = 0
Query:   87 GMGRGRGPS--------GPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 253
            G GRG GP         G PPPNY+C RC  PGH+I +CPT GD  FD  R+KK  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  229 GGGRGTGPGVPAGPNLLGSPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 405          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A329T760_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T760_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.970e-35
Identity = 78/179 (43.58%), Postives = 102/179 (56.98%), Query Frame = 0
Query:   89 GRGRGPSGP--------PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 253
            GRG GP GP        PPPNY+C RC  PGH+I +CPT GD  FD  R+KK  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  232 GRGAGPGGPVGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 406          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A484DZX4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZX4_BRELC)

HSP 1 Score: 145 bits (365), Expect = 1.590e-34
Identity = 79/179 (44.13%), Postives = 103/179 (57.54%), Query Frame = 0
Query:   89 GRGRGPSGP--------PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ---GGG--LVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 253
            GRG  P GP        PPPNY+C RC  PGH+I +CPT GD  FD  R+KK  GIP S +K      +   GGG  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  232 GRGAVPGGPSTPNLVGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGGGKTVVNAPWGGLAVIEPQNKNFSKLMAQSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IDRKLTCPLCSVNNMSPEKLLPNK 406          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A6A4FP78_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FP78_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.040e-34
Identity = 77/179 (43.02%), Postives = 101/179 (56.42%), Query Frame = 0
Query:   89 GRGRGPSGP--------PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 253
            GRG GP  P        PPPNY+C RC  PGH+I +CPT GD  FD  R+KK  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  232 GRGAGPGXPGGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMALSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 406          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: A0A2P4X587_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X587_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.810e-34
Identity = 78/181 (43.09%), Postives = 102/181 (56.35%), Query Frame = 0
Query:   87 GMGRGRGPS--------GPPPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 253
            G GRG GP         G PPPNY+C RC  PGH+I +CPT GD  FD  R+KK  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  223 GGGRGAGPGVPAGPNLLGSPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 399          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: W2Q8C9_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2Q8C9_PHYPN)

HSP 1 Score: 144 bits (362), Expect = 3.770e-34
Identity = 77/179 (43.02%), Postives = 101/179 (56.42%), Query Frame = 0
Query:   89 GRGRGPSGP--------PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 253
            GRG GP  P        PPPNY+C RC  PGH+I +CPT GD  FD  R+KK  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  232 GRGAGPGAPGAPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 406          
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Match: D0NE99_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NE99_PHYIT)

HSP 1 Score: 142 bits (358), Expect = 9.700e-34
Identity = 78/179 (43.58%), Postives = 102/179 (56.98%), Query Frame = 0
Query:   87 GMGRGRG-PSGP-----PPPNYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 253
            G G G G P GP     PPPNY+C RC  PGH+I +CPT GD  FD  R+KK  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+
Sbjct:  224 GRGAGSGAPGGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNK 398          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6469.15145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMD5_ECTSI9.320e-11471.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L225_9PHAE9.220e-10857.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CNQ4_9STRA2.780e-4853.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P4Y5F3_9STRA3.990e-3543.09Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A329T760_9STRA5.970e-3543.58Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A484DZX4_BRELC1.590e-3444.13Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A6A4FP78_9STRA2.040e-3443.02Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A2P4X587_9STRA2.810e-3443.09Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
W2Q8C9_PHYPN3.770e-3443.02Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
D0NE99_PHYIT9.700e-3443.58Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025829Zinc knuckle CX2CX3GHX4CPFAMPF13696zf-CCHC_2coord: 99..119
e-value: 4.8E-8
score: 32.7
NoneNo IPR availableGENE3D4.10.60.10coord: 98..145
e-value: 2.6E-12
score: 48.8
NoneNo IPR availablePANTHERPTHR15439:SF0E3 UBIQUITIN-PROTEIN LIGASE RBBP6coord: 85..345
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 187..254
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 186..264
e-value: 5.4E-16
score: 60.0
IPR033489E3 ubiquitin-protein ligase RBBP6 familyPANTHERPTHR15439RETINOBLASTOMA-BINDING PROTEIN 6coord: 85..345
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 104..118
score: 9.01
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 199..240
score: 10.173
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 90..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6469contigL-elsbetiae_contig6469:758..10407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6469.15145.1mRNA_L-elsbetiae_contig6469.15145.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6469 758..10407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6469.15145.1 ID=prot_L-elsbetiae_contig6469.15145.1|Name=mRNA_L-elsbetiae_contig6469.15145.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=356bp
SGRHGFANRSWTAGGAAAGGGNRTMTFGGRGGPGGGPGGRGGGRGGRRGG
LGPAGPPGMDGMGPGRGGGRGGPSQRGGGFFGGRGGGMGRGRGPSGPPPP
NYLCRRCSQPGHHIHDCPTIGDSSFDNTRLKKVVGIPLSMIKLADGDRQG
GGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCP
ICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLL
PNEEEAAAAGATAAAGGGGGGGGGGGNKRKRLRPSQKGVDAILDLGPEDA
EEEEEEEEEDPFGHDVYDVQAQPLGEEQQQQEQQEEGKRPQGQQQQQGGG
GGGGGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025829Zn_knuckle_CX2CX3GHX4C
IPR013083Znf_RING/FYVE/PHD
IPR033489RBBP6
IPR001878Znf_CCHC
IPR001841Znf_RING
IPR036875Znf_CCHC_sf