prot_L-elsbetiae_contig64.15071.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig64.15071.1
Unique Nameprot_L-elsbetiae_contig64.15071.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length177
Homology
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: D7G468_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G468_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 2.980e-103
Identity = 157/172 (91.28%), Postives = 164/172 (95.35%), Query Frame = 0
Query:    5 AKAPKWYAGDDVKPKSPPQKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALANPMLKAYLNAKFSLKKGDRPHEMIF 176
            AKAPKWY+GDDVKPK+ PQKHNPTKLRS+I PGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIP ADDSYFTR+EVA KT+EDQFF Q  AKSSTVSDKRKADQKTVDAG+LAA+ NPMLKAYLNAKFSLKKGDRPHEMIF
Sbjct:    9 AKAPKWYSGDDVKPKAAPQKHNPTKLRSTITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPAADDSYFTREEVATKTDEDQFFEQG-AKSSTVSDKRKADQKTVDAGVLAAMTNPMLKAYLNAKFSLKKGDRPHEMIF 179          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A835YT51_9STRA (60S ribosomal protein L6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT51_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.530e-66
Identity = 116/173 (67.05%), Postives = 133/173 (76.88%), Query Frame = 0
Query:    9 KWYAGDDVK-PKSPPQK---HNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALA-NPMLKAYLNAKFSLKKGDRPHEMIF 176
            +WY  DD+K P+    K   H PTKLRSSI PGT+ +LLSGRFRGKRVVFLKQ+ SGTLLVTGPY VNGVP+RRVNQAYVIATS  +DVSKV +   DD+YF R   AKKT ED FF QA +K S VSD++K DQ  VDA ILA L+ + +LKAYLNAKFSL K DRPHEM+F
Sbjct:   14 RWYPADDIKAPRKSKAKRSVHKPTKLRSSITPGTVCVLLSGRFRGKRVVFLKQMASGTLLVTGPYKVNGVPLRRVNQAYVIATSTKLDVSKVDVSAIDDAYFARAPEAKKTAEDAFFAQA-SKESVVSDQKKKDQDVVDASILAGLSKDKLLKAYLNAKFSLTKKDRPHEMVF 185          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: K3WPZ3_GLOUD (60S ribosomal protein L6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPZ3_GLOUD)

HSP 1 Score: 189 bits (480), Expect = 1.570e-57
Identity = 109/180 (60.56%), Postives = 133/180 (73.89%), Query Frame = 0
Query:    5 AKAPKWYAGDDVKPKSPPQK-----HNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKK-TEEDQFFNQALAKSS-TVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 176
            +KA KWY  D +  K    K         KLR SI PGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY VNGVP+RRVNQAYVIATS  V++S VT+P  DDSYF +++ +KK ++E+QFF Q+ A S+  +SDKRK DQK +DA ++  L + P L+AYLNAKF+L K DR HE+ F
Sbjct:   61 SKAAKWYPADYIPKKLASAKTARNSKKTAKLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSTKVELSDVTLPDIDDSYFVKEKPSKKDSKEEQFFAQSGAASAPAISDKRKQDQKAIDAILMKKLKDEPYLQAYLNAKFTLTKNDRVHELQF 240          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: Q7XR19_ORYSJ (60S ribosomal protein L6 n=16 Tax=Oryzeae TaxID=147380 RepID=Q7XR19_ORYSJ)

HSP 1 Score: 188 bits (477), Expect = 2.580e-57
Identity = 107/178 (60.11%), Postives = 132/178 (74.16%), Query Frame = 0
Query:    3 APAKAPKWYAGDDVKPKSPP-QKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRD--EVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAAL-ANPMLKAYLNAKFSLKKGDRPHEMIF 176
            A A APK+Y  DDVKP+ P  +K NPTKLRSSI PGT+LILL+GRF GKRVVFLKQL SG LLVTGP+ +NGVP+RRVNQ YVIATS  VD+S V +   DD YF+RD  + AKKTE + F  +  A +  + + +K DQK VDA ++ A+ A P LK YL A+FSL+ GD+PHEM+F
Sbjct:   46 AAAAAPKFYPADDVKPRQPSTRKPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEKFDDKYFSRDKKQKAKKTEGELFETEKEA-TKNLPEFKKEDQKVVDAELIKAIEAVPDLKTYLGARFSLRDGDKPHEMVF 222          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A7S4V8G6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V8G6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.660e-57
Identity = 103/174 (59.20%), Postives = 129/174 (74.14%), Query Frame = 0
Query:    6 KAPKWYAGDDVKPKSPPQKH--NPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAAL-ANPMLKAYLNAKFSLKKGDRPHEMIF 176
            K+P++Y  DDVK   P +K   N  K+RSSI  GT+LILL+GRFRGKRVV LK L SG LLV+GPY +NGVP+RRV+QAYVIAT+ +VDVS + +   DD+YF R   + +  ED+FF    AK + VS+ RKADQK VDA +L A+ A PMLK YLNAKFSL KGD+PH+M+F
Sbjct:   49 KSPRFYPADDVKRPLPSRKSKKNAAKVRSSISAGTVLILLAGRFRGKRVVCLKALESGLLLVSGPYKINGVPLRRVHQAYVIATTTTVDVSAIDVSAIDDAYFARAASSGEEGEDEFFANDAAKPAVVSETRKADQKKVDAALLKAVEAVPMLKQYLNAKFSLSKGDKPHKMVF 222          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A7S1U5W8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5W8_9STRA)

HSP 1 Score: 188 bits (477), Expect = 4.470e-57
Identity = 104/171 (60.82%), Postives = 131/171 (76.61%), Query Frame = 0
Query:    8 PKWYAGDDVK-PKSPPQKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 176
            P  Y  DDVK P    + + PTKLR+SI PGT+LI+L+GRFRGKRVVFLKQL SGTLLVTGPY VNGVP+RRVNQAYVIATS+ VD++ V++P  DD +F R++   KT+E+QFF+     ++ VS  RK  QK VDAGILAA+   P+L+AYL A+FSL+ GD+PH+M F
Sbjct:   71 PAMYPADDVKKPLMRFRVNKPTKLRASITPGTVLIMLAGRFRGKRVVFLKQLSSGTLLVTGPYKVNGVPLRRVNQAYVIATSVVVDLAGVSLPDIDDEFFAREKKESKTDEEQFFSNEPT-ATVVSQARKDAQKAVDAGILAAVKKVPLLQAYLGARFSLRNGDKPHKMKF 240          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A1J7IM48_LUPAN (Ribosomal_L6e_N domain-containing protein n=5 Tax=Lupinus TaxID=3869 RepID=A0A1J7IM48_LUPAN)

HSP 1 Score: 186 bits (471), Expect = 3.020e-56
Identity = 104/178 (58.43%), Postives = 129/178 (72.47%), Query Frame = 0
Query:    3 APA-KAPKWYAGDDVK-PKSPPQKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAK-KTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 176
            APA KAPK+Y  DDVK P+    K  PTKLR+SI PGT+LILL+G F+GKRVVFLKQLPSG LLVTGP+ +NGVP+RRVNQAYVI TS  VDVS V +   DD YFT+D   K K  E +FF     + + +  ++K DQKTVD+ +L A+ + P LK YL A+FSLK G +PHE++F
Sbjct:   57 APAEKAPKFYPADDVKKPRLNKHKPKPTKLRASITPGTVLILLAGHFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDVSAVNVDKFDDKYFTKDAKKKNKKGEGEFFEAEKEEKNVLPQEKKDDQKTVDSALLQAIQSVPDLKTYLGARFSLKSGQKPHELLF 234          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: B8CBR7_THAPS (60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBR7_THAPS)

HSP 1 Score: 184 bits (466), Expect = 3.030e-56
Identity = 103/174 (59.20%), Postives = 127/174 (72.99%), Query Frame = 0
Query:    6 KAPKWYAGDDV-KPK-SPPQKHNPTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAAL-ANPMLKAYLNAKFSLKKGDRPHEMIF 176
            K+ ++Y  DD+ +PK S  +KHN  K+R+S+ PGT+ ILLSGRFRGKRVV LK L SG LLVTGPY +NGVP+RRVNQAYVIATS  VDVS   +   DD+YF R +      E++FF    AK + VSD+RKADQK VDA IL A+ + P++K YL + FSLKK DRPHEMIF
Sbjct:    5 KSARYYPADDIPRPKHSRAKKHNAPKVRASLTPGTVCILLSGRFRGKRVVCLKALESGLLLVTGPYKINGVPLRRVNQAYVIATSTKVDVSGADVSKIDDAYFARVKSDSAEGEEEFFANDAAKPAVVSDQRKADQKKVDAAILKAVESTPLMKNYLGSNFSLKKHDRPHEMIF 178          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A3R7J7S6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J7S6_9STRA)

HSP 1 Score: 185 bits (470), Expect = 4.280e-56
Identity = 102/175 (58.29%), Postives = 130/175 (74.29%), Query Frame = 0
Query:    9 KWYAGDDVKPKSPPQKHN-----PTKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKK-TEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 176
            KWY  D +  K    K +       +LR SI PGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY+VNGVP+RRVNQA+VIATS  +D+S V +P  DD+YFT+D+ AKK ++E++FF         ++++RK DQKTVDA ++  LA+ P L+AYLNAKF+L K DR H+M+F
Sbjct:   60 KWYPVDHIPKKLASAKTSRNSKKTARLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYAVNGVPLRRVNQAFVIATSTRMDLSNVQLPEIDDAYFTKDKPAKKNSKEERFFADQQTAGPMIAEQRKKDQKTVDALLMKKLADEPYLRAYLNAKFTLTKNDRVHDMLF 234          
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Match: A0A6A3T8I8_9STRA (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T8I8_9STRA)

HSP 1 Score: 185 bits (469), Expect = 5.370e-56
Identity = 108/176 (61.36%), Postives = 130/176 (73.86%), Query Frame = 0
Query:    9 KWYAGDDVKPKSPPQ---KHNP---TKLRSSIKPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPVADDSYFTRDEVAKKT-EEDQFFNQALAKSSTVSDKRKADQKTVDAGILAALAN-PMLKAYLNAKFSLKKGDRPHEMIF 176
            KWY  D + PK  P    K N     KLR SI PGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY VNGVP+RRVNQA+VIATS  +D++ V +P  DD YFT+D+ AKK+ +ED+FF  A A    ++++RK DQK VDA ++  LAN P L+AYLNAKF+L K DR H+M F
Sbjct:   58 KWYPADYI-PKPLPSAKTKRNSIKTAKLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAFVIATSTRMDLTDVQLPEIDDEYFTKDKPAKKSSKEDRFFEMATA--PVIAEQRKKDQKEVDALLMKKLANEPYLRAYLNAKFTLTKNDRVHDMRF 230          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig64.15071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G468_ECTSI2.980e-10391.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YT51_9STRA2.530e-6667.0560S ribosomal protein L6 n=1 Tax=Tribonema minus T... [more]
K3WPZ3_GLOUD1.570e-5760.5660S ribosomal protein L6 n=1 Tax=Globisporangium u... [more]
Q7XR19_ORYSJ2.580e-5760.1160S ribosomal protein L6 n=16 Tax=Oryzeae TaxID=14... [more]
A0A7S4V8G6_9STRA3.660e-5759.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1U5W8_9STRA4.470e-5760.82Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1J7IM48_LUPAN3.020e-5658.43Ribosomal_L6e_N domain-containing protein n=5 Tax=... [more]
B8CBR7_THAPS3.030e-5659.2060S ribosomal protein L6 (Fragment) n=1 Tax=Thalas... [more]
A0A3R7J7S6_9STRA4.280e-5658.29Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A6A3T8I8_9STRA5.370e-5661.36Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 32..125
e-value: 3.3E-12
score: 48.2
IPR00091560S ribosomal protein L6EPFAMPF01159Ribosomal_L6ecoord: 71..176
e-value: 1.1E-34
score: 119.3
IPR00091560S ribosomal protein L6EPANTHERPTHR1071560S RIBOSOMAL PROTEIN L6coord: 5..176
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 31..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig64contigL-elsbetiae_contig64:28067..29986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig64.15071.1mRNA_L-elsbetiae_contig64.15071.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig64 28067..29986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig64.15071.1 ID=prot_L-elsbetiae_contig64.15071.1|Name=mRNA_L-elsbetiae_contig64.15071.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp
MQAPAKAPKWYAGDDVKPKSPPQKHNPTKLRSSIKPGTILILLSGRFRGK
RVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPV
ADDSYFTRDEVAKKTEEDQFFNQALAKSSTVSDKRKADQKTVDAGILAAL
ANPMLKAYLNAKFSLKKGDRPHEMIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014722Rib_L2_dom2
IPR00091560S_ribosomal_L6E
IPR008991Translation_prot_SH3-like_sf