prot_L-elsbetiae_contig6390.15058.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6390.15058.1
Unique Nameprot_L-elsbetiae_contig6390.15058.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length324
Homology
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A6H5JP76_9PHAE (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP76_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 3.110e-121
Identity = 202/300 (67.33%), Postives = 231/300 (77.00%), Query Frame = 0
Query:   35 GVDLMDRHHLNRYDSESRRTLKKGFSHFLSPQLQALIKEKPRVALSEKADFAELLAEEPSASPWPIQQLSMVLLRRSFLIRKRV---TIAGGAANANEGEEGPPVLPDVPMANQTTNKFSPAYAKKAKQIAK----RPRPPSD--DDEEGAAKAFSSAPAPSPPL--DLKSAVKPLISQLVAMKWP-GWSNPFMTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQAAGGSGGSGQVDKKQRI 322
            GVD+MDRH L+RYD+ESRRTL+KG SHFLSPQLQ LIKEKPR+AL+EKA FAELL+EE S     I++LSM L+RRSF+IRKRV   + AGG A         P  PD+P A QTTNK SPA+A+KAKQ+AK    R RP SD  + E  +A  +SS+ + + PL  + KS VKPLIS+LVAMKWP GW NPF TVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAE+EADLEL+V NAL FNRP DPVYQFAL L+ AFR EL  +KR LEDLAQQ  G SG  G  DKKQR+
Sbjct:   10 GVDIMDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRIALAEKAYFAELLSEERSGRR--IEELSMDLMRRSFMIRKRVAPGSAAGGLAXXXXXXXXVP--PDMPAALQTTNKLSPAFARKAKQVAKQAMKRQRPSSDNGEGEMASASGYSSSASAAAPLSQEAKSLVKPLISRLVAMKWPSGWGNPFTTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALQLQEAFRRELSVIKRNLEDLAQQRGGVSGSEGVQDKKQRV 305          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A836CA18_9STRA (Bromodomain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA18_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.560e-29
Identity = 103/300 (34.33%), Postives = 139/300 (46.33%), Query Frame = 0
Query:   18 VHLLTPASELAALAEPTG--VDLMDRHHLNRYDSESRRTLKK---GFSHFLSPQLQALIKEKPRVALSEKADFAELLAEEPSASPWPIQQLSMV--LLRRSFLIRKRVTIAGGAANANEGEEGPPVLPDVPMANQTTNKFSPAYAKKAKQIAKRPRPPSDDDEEGAAKAFSSAPAPSPPLDLKSAVKPLISQLVAMKW-PGWSNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 305
            +HL+TP +ELAA  EPT    DL     L  ++ + R          +HFL P L  L++ K RV  +EKA+FAELLA EP A P P +++      +RRSF IR+R    GGA +        P      M   TT    P  A++ ++ A+     + D                   D+  A+ PL  +L  M +   W NPF  V     A     P YF F+K PMNLT++RD L   +Y  +A+  AD+ LV  NA  +NRP DPVY FA  L      EL  +        QQ
Sbjct:   24 LHLITPEAELAAAEEPTANAADLPALASLAHFEKQLRAMPLPHPIDMAHFLPPALLPLLRAKWRVVQAEKANFAELLASEPPA-PQPRKKVPFTEAAMRRSFFIRRR---EGGAPS--------PATVGGSMPFPTTG-GRPITARRLRRPARITGEMTPD-------------------DVSDALTPLHQRLTRMSFGKAWGNPFTQVITPETAAALRVPNYFNFVKEPMNLTWMRDKLRGAEYAAIADYVADIALVRANAQRYNRPGDPVYGFADTLYDVCAQELAQLGYIAPPRPQQ 291          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A5D6YD80_9STRA (Bromo domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD80_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.220e-18
Identity = 44/124 (35.48%), Postives = 76/124 (61.29%), Query Frame = 0
Query:  192 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 305
            L++ + PL+++L  + W GW      +NPF+    + N      P YF+++K PM+LT +++ + K +Y  V +  +D++L+V NA TFNR  +PV+Q A++L   + S+L   + TLEDL Q+
Sbjct:  167 LQTLLAPLVTELRGLTWAGWIVSGKAANPFIQKITRENCKRLGVPNYFDYVKEPMDLTRMKEKVEKAEYARVEQFTSDIKLMVANAKTFNREGEPVFQMAIELEQLYESKLVGYRATLEDLQQE 290          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A3F2RFR5_9STRA (Bromo domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFR5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.560e-18
Identity = 41/124 (33.06%), Postives = 74/124 (59.68%), Query Frame = 0
Query:  192 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 305
            L+  + PL+++L  + W GW       NPF+  F K N      P YF+++K PM+LT +++ + + +Y+ + +   D++L+  NA TFNR  +PV+Q A+++   + S+LP  K+  +DL Q+
Sbjct:  151 LQKLLAPLVTELRGLTWAGWVVSGKPGNPFLQKFTKDNCKRLGVPNYFDYVKNPMDLTRMKEKVERAEYSKIDQFTTDIKLMAANAKTFNRVGEPVHQMAIEIEQLYESKLPGYKKMFDDLQQE 274          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: K3X1N2_GLOUD (Bromo domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1N2_GLOUD)

HSP 1 Score: 91.7 bits (226), Expect = 1.550e-17
Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 0
Query:  192 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 305
            L+  + PL+++L  + W GW       NPF+    + N      P YF+F+K PM+LT +++ + K +Y  + +  +D++L+V NA TFNR  +PV+Q A++L   + S+L   K TL+DL Q+
Sbjct:  169 LQKLLAPLVTELRGLTWVGWIVNGKAGNPFIQKITRENCKRLGVPNYFDFVKEPMDLTRMKEKVEKAEYVRIDQFTSDIKLMVANAKTFNRVGEPVHQMAIELEQLYVSKLAGYKTTLDDLQQE 292          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: M4BEQ4_HYAAE (Bromo domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEQ4_HYAAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.340e-16
Identity = 40/124 (32.26%), Postives = 73/124 (58.87%), Query Frame = 0
Query:  192 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 305
            L+  + PL+++L A+ W GW       NPF+  F K N      P YF+++K PM+LT +++ + + +YT + +   D++L+  NA  FNR  +PV+Q A+++   + S+L   K+  ++L Q+
Sbjct:  142 LQKLLAPLVAELRALTWAGWVVSGKAGNPFLQKFTKDNCKRLGVPNYFDYVKTPMDLTRMKEKVERAEYTKIEQFTTDIKLMAANAKAFNRVGEPVHQMAIEIERLYESKLSAYKKMFDELHQE 265          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A7S2V5Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.160e-16
Identity = 46/123 (37.40%), Postives = 74/123 (60.16%), Query Frame = 0
Query:  185 APSPPLD-LKSAVKPLISQLVAMKWPG-WSNPFMTVFKKSNAPP----RYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLED 301
            AP P  D ++  ++P+++ L  M + G W NPF TV  + N        YF+FI+RPMNLT+I++ +N  KY+++ E+  D+EL+V NA  +NRP++ VY FA  LR  +   +  +   + D
Sbjct:  218 APLPRADQVQKVLRPVVNSLWKMNFGGQWGNPFRTVIDQENCVALGVANYFDFIERPMNLTWIKEKMNSKKYSSLGELTDDVELMVQNAHKYNRPNEEVYIFATTLREKYYKIISSISEQVLD 340          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A8K1CEI2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEI2_PYTOL)

HSP 1 Score: 87.8 bits (216), Expect = 3.730e-16
Identity = 43/124 (34.68%), Postives = 73/124 (58.87%), Query Frame = 0
Query:  192 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 305
            L+  + PLI++L ++ W GW       NPF+    K N      P YF+F++ PM+LT I++ + K +Y+ + +   D++L+V+NA TFNR  +PV+Q A +L   + S++     T E+L Q+
Sbjct:  169 LQKVLAPLITELRSLTWSGWIVSGKPGNPFIQKITKDNCRRLGVPNYFDFVREPMDLTRIKEKVEKAEYSRIDQFTVDIKLMVHNAKTFNRVGEPVHQMAGELEQLYESKVVAYGATFEELQQE 292          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A7S3YJB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJB1_HETAK)

HSP 1 Score: 84.3 bits (207), Expect = 6.690e-16
Identity = 37/116 (31.90%), Postives = 69/116 (59.48%), Query Frame = 0
Query:  193 KSAVKPLISQLVAMKWPGWSNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQ 304
            +  +KP+   L+A +W  W NPF  V  + N      P YF+ I+ PMNL +I+  ++K+KY T  + +AD++L++ NA+T+NR  +PV+  A  +R  ++ ++  ++  +  L +
Sbjct:   42 QGVLKPITEILLAKEWKKWGNPFTAVITRENCHKMDVPDYFDVIQTPMNLKWIKAKVDKHKYLTFQQFDADIDLMLENAMTYNREGEPVFAMAKVIRDVYKQKVADLQPAIAVLRE 157          
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Match: A0A2D4BWE1_PYTIN (Bromo domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWE1_PYTIN)

HSP 1 Score: 84.3 bits (207), Expect = 6.240e-15
Identity = 39/124 (31.45%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  192 LKSAVKPLISQLVAMKWPGW------SNPFMTVFKKSNAP----PRYFEFIKRPMNLTFIRDNLNKNKYTTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLEDLAQQ 305
            L+  + PLI++L  + W  W       NPF+    K N      P YF+F+  PM+LT +++ + K +Y ++ +  +D++L+V NA TFNR  +PV+Q A++L   + +++     T ++L Q+
Sbjct:  168 LQKVLVPLIAELRGLTWSAWIVSGKPGNPFLQKITKENCRRLGVPNYFDFVAEPMDLTRVKEKVEKAEYYSIQQFTSDIKLMVQNAKTFNRVGEPVHQMAIELEQLYEAKVVSYAATFDELQQE 291          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6390.15058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP76_9PHAE3.110e-12167.33Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CA18_9STRA3.560e-2934.33Bromodomain-containing protein n=1 Tax=Tribonema m... [more]
A0A5D6YD80_9STRA2.220e-1835.48Bromo domain-containing protein n=1 Tax=Pythium br... [more]
A0A3F2RFR5_9STRA4.560e-1833.06Bromo domain-containing protein n=2 Tax=Phytophtho... [more]
K3X1N2_GLOUD1.550e-1735.48Bromo domain-containing protein n=1 Tax=Globispora... [more]
M4BEQ4_HYAAE1.340e-1632.26Bromo domain-containing protein n=1 Tax=Hyaloperon... [more]
A0A7S2V5Q0_9STRA3.160e-1637.40Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CEI2_PYTOL3.730e-1634.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3YJB1_HETAK6.690e-1631.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2D4BWE1_PYTIN6.240e-1531.45Bromo domain-containing protein n=2 Tax=Pythium in... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 225..241
score: 42.33
coord: 259..278
score: 34.35
coord: 241..259
score: 28.6
IPR001487BromodomainSMARTSM00297bromo_6coord: 185..297
e-value: 2.0E-13
score: 60.6
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 213..281
e-value: 5.8E-16
score: 58.3
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 207..278
score: 15.562
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 153..308
e-value: 5.4E-24
score: 86.5
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 186..299
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 220..315
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING 2A-RELATEDcoord: 220..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6390contigL-elsbetiae_contig6390:7534..10470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6390.15058.1mRNA_L-elsbetiae_contig6390.15058.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6390 7467..10701 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6390.15058.1 ID=prot_L-elsbetiae_contig6390.15058.1|Name=mRNA_L-elsbetiae_contig6390.15058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=324bp
MPWNCGHQDCDKGPCGGVHLLTPASELAALAEPTGVDLMDRHHLNRYDSE
SRRTLKKGFSHFLSPQLQALIKEKPRVALSEKADFAELLAEEPSASPWPI
QQLSMVLLRRSFLIRKRVTIAGGAANANEGEEGPPVLPDVPMANQTTNKF
SPAYAKKAKQIAKRPRPPSDDDEEGAAKAFSSAPAPSPPLDLKSAVKPLI
SQLVAMKWPGWSNPFMTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKY
TTVAEIEADLELVVNNALTFNRPHDPVYQFALDLRSAFRSELPHVKRTLE
DLAQQAAGGSGGSGQVDKKQRIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf