prot_L-elsbetiae_contig636.15020.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig636.15020.1
Unique Nameprot_L-elsbetiae_contig636.15020.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length368
Homology
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BLAST of mRNA_L-elsbetiae_contig636.15020.1 vs. uniprot
Match: D7G2K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2K9_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 3.130e-99
Identity = 208/282 (73.76%), Postives = 211/282 (74.82%), Query Frame = 0 
Query:    1 MGRVRKYKKVKAMDPFAKGGGGGRMGMGRKGGSDLDRNLPPDVKNHQAQRLNNLEGEXXXXXXXXXRRLPQWAHEELKETAKRVREEHADPEGRGRQPEPQRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNKRXXXXXXXXXXXXKLKKQGLWEEVQRRERLDEEQAAAGFDGEDKGKRATGXXXXXXXXXXXXXGHN---------------WGVLGRADAEEGT-ELPQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQAAANA 266
            MGRVRKYKKVKAMDPFAKGG GGRMGMGRKGGSDLDRNLPPDVKNHQAQRLNNLE E         RRLPQWAHEELKETAKRVREEHADP G+GRQPEPQRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNK XXXXXXXXXXXX      LW                             XXXXXXXXXXXXX                  WGVLGRAD +EG  +L QKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQAAA A
Sbjct:    1 MGRVRKYKKVKAMDPFAKGGCGGRMGMGRKGGSDLDRNLPPDVKNHQAQRLNNLE-EGKDKKKKNKRRLPQWAHEELKETAKRVREEHADPGGKGRQPEPQRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNKXXXXXXXXXXXXXXXXXXXLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVLGRADDDEGAAQLLQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQAAAAA 281
[Close]
BLAST of mRNA_L-elsbetiae_contig636.15020.1 vs. uniprot
Match: A0A835YUV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV8_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.040e-23
Identity = 97/274 (35.40%), Postives = 126/274 (45.99%), Query Frame = 0 
Query:    1 MGRVRKYKKVKAMDPFAKGGGGGRMGMGRKGGSDLDRNLPPDVKNHQAQRLNNLEGEXXXXXXXXXRRLPQWAHEELKETAKRVREEHADPE---GRGRQPEP-----QRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNKRXXXXXXXXXXXXKLKKQGLWEEVQRRERLDEEQAAAGFDGEDKGKRATGXXXXXXXXXXXXXGHNWGVLGRADAEEGTELPQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQAAANA 266
            MGRVR+YKK K +D  +K     R    +K   D++ NLPPD  NHQAQRL   +G          +RLP+WA EEL+ETAKR RE  AD +   G    P P      +  +  KR DES+R+FN+RVR+  A+ LKD  K  SST  R            KL++QGLWEE  + +   EEQ  A                                       E  +  + E I+FGE  H PP    +PK +G K     KPW R   ++A
Sbjct:    1 MGRVRRYKKAKNLDITSK-----RKRADKK---DVEHNLPPDTANHQAQRL-KADG---TLKRRAKQRLPEWAKEELRETAKRERE--ADKQLLAGAAATPLPGENDTPKVKITPKRTDESLREFNERVRKVAAEALKDNAKRASSTVARRKKHLAEKSQKKKLQRQGLWEE-HKMQVAREEQGIA---------------------------------------EERDFSKPEHIQFGETVHEPPRFQSMPKLKGLKPDLAEKPWLRGLRSDA 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig636.15020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2K9_ECTSI3.130e-9973.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV8_9STRA2.040e-2335.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 276..296
NoneNo IPR availableCOILSCoilCoilcoord: 319..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig636contigL-elsbetiae_contig636:7795..12164 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig636.15020.1mRNA_L-elsbetiae_contig636.15020.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig636 7739..12324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig636.15020.1 ID=prot_L-elsbetiae_contig636.15020.1|Name=mRNA_L-elsbetiae_contig636.15020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=368bp
MGRVRKYKKVKAMDPFAKGGGGGRMGMGRKGGSDLDRNLPPDVKNHQAQR
LNNLEGEGKGKKNKNKRRLPQWAHEELKETAKRVREEHADPEGRGRQPEP
QRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNKRRKKYLDDK
KRKNKLKKQGLWEEVQRRERLDEEQAAAGFDGEDKGKRATGGGGGGGGDG
GDGGGHNWGVLGRADAEEGTELPQKERIRFGEVAHAPPDLAKIPKPRGFK
DQGQAKPWARQAAANASAAAGGGGRQQQQQQQQQQQQQQQQQHNKKGKRD
KKTVVGGSGEEGEEEGEQREEQRQMAAEAKKAQKRQMEEMRQRVQEAYSG
LKKKRRAGQTQFVGSDL*
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