prot_L-elsbetiae_contig6326.14974.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6326.14974.1
Unique Nameprot_L-elsbetiae_contig6326.14974.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length729
Homology
BLAST of mRNA_L-elsbetiae_contig6326.14974.1 vs. uniprot
Match: A0A6H5JA01_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA01_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 1.020e-87
Identity = 502/803 (62.52%), Postives = 534/803 (66.50%), Query Frame = 0
Query:    1 GEIGKSDLEKLVKDKEATEIKAAEQQKADRVRQEAQTKRQLAAQEKMDAIMVAGAAASIGLVAGGLGDGAFAGGDAPWAPPLGAVALGGLGYAAATADGEIGSTTRAVVGGFVAKLLASLKAAAASAADNAKAAAVNKVDETVASIKAVPVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVKELTALPNKVIDEAVSKVEAVLPTPPA----APKXXXXXXXXXXXXXXXXXXXXXXXASAPAASPAKPPAPPAAKIXXXXXXXXXXXXXXXAKTAXXXXXXXXXXXXXXXXXXXXXXKPSPPPPVAAPVKKMPP--------LSAPLRTKAGAKASSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPFGGLFGGNGGSSGKSETSKAATKAPAAAKAPXXXXXXXXXXXXXXXXXKAKA----PSSPFGGLFGGN---------------------------------------------------GGGSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADEKKATPAAPPAPA-KKAPMLSTPLRSAAKPXXXXXXXXXXXXXXXXXXXX-------PAAKKAAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGGKAKASAKGAAATGFFKPALAEQLTKKMNEDQLKKLDALTAKYANGGSPTAYVNSAAQLVGQGVVAEILPDLVGSLPQGKQKSDLFTVYSTY 728
            GEI KSDLEKLVK+KEA E++AAEQ++A+ +RQ AQ K Q+AA+EKMDA+MVAGA A++GLVAGGLGDGAFAGGDAPWAPP+GAVALGGLGYAAAT DG +G  TR V+GGFVA LLASLK AA+SA DNAK++A  KVDETVASIKAVP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VKELTA+PNKVI +AVSKVEAVLPTPPA    APK XXXXXXXXX       XXXXXX                   XXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXX                         LSAPLRTK+G KA+S+    XXXXXXXXXXXXXXXXXXXXXXXXX SS PFGGLFGGN          K    APA  KAP   XX            KAK     PSSPFGGLF  N                                                   GG  +K              X        XXXXXXXXXXXXXXXXXX        A PPA A KKAPMLS PLRSA+KP XXX        XXXX            AAKK APAA   XXX                       AG KA A AKGAAAT FFKPAL +QL+KKMNEDQLKKLDA+TAKYAN GSPTAYVNSAAQLVG+GV+++ILPDLVGSLPQGKQKSDLFTVYSTY
Sbjct:  146 GEIAKSDLEKLVKEKEAVELEAAEQRQAETLRQAAQAKAQVAAKEKMDALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYAAATTDGVVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPKAXXXXXXXXXSKPAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRTKSGVKATSAPVAAXXXXXXXXXXXXXXXXXXXXXXXXXPSS-PFGGLFGGNXXXXXXXXXPKPTVAAPAK-KAPPASXXSTAS--------KAKXXXXXPSSPFGGLFXXNXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGNGAKPAAPKPAAAAPAKEXPAPAAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXATPPAAAVKKAPMLSAPLRSASKPAXXXPAPKAAPKXXXXAPRVVAKXXXXAAAKKPAPAASGGXXXMFGMFGGGGESKAATSPAP----AGRKAPAPAKGAAATTFFKPALVKQLSKKMNEDQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGVISDILPDLVGSLPQGKQKSDLFTVYSTY 934          
BLAST of mRNA_L-elsbetiae_contig6326.14974.1 vs. uniprot
Match: A0A6U4HT34_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HT34_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.720e-8
Identity = 58/152 (38.16%), Postives = 80/152 (52.63%), Query Frame = 0
Query:    1 GEIGKSDLEKLVKDKEATEIKAAEQQKADRVRQEAQTKRQLAAQEKMD--AIMVAGAAASIGLVAGGLGDGAFAGGDAPWAPPLGAVALGGLGYAAATADGEIGSTTRAVVGGFVAKLLASLKAAAASAADNAKAAAVNKVDETVASIKAVP 150
            G+I   D EK + +KEA    AAE+ KA         K ++A ++++D  AI  A + A+IGLV GGL DGA A GDAPWAP  G    G   YA A  D ++G   R   GG       ++  AA   ++   AAA ++ D+  A IK +P
Sbjct:   57 GKISTEDFEKALVEKEAA--MAAEKAKA-------LEKTRIARKKELDTEAIYAAASGATIGLVTGGLLDGALANGDAPWAPVAGLAVGGAALYAGARLDNKVGEVLRFSFGGLAQGTQKAVTGAATDFSEGVTAAAKSQADKIQADIKGIP 199          
BLAST of mRNA_L-elsbetiae_contig6326.14974.1 vs. uniprot
Match: A0A7R9YG73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG73_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 8.400e-7
Identity = 52/131 (39.69%), Postives = 71/131 (54.20%), Query Frame = 0
Query:   20 IKAAEQQKADRVRQEAQTKRQLAAQEKMDAIMVAGAAASIGLVAGGLGDGAFAGGDAPWAPPLGAVALGGLGYAAATADGEIGSTTRAVVGGFVAKLLASLKAAAASAADNAKAAAVNKVDETVASIKAVP 150
            IK  E++ A + + EA  K+   A+ + +A  VA + A+IGLVAGGL DGA A GDAPWAP +G    GGL YA    D ++G   R   GG      A++  AA   AD     A  +V+    SI++ P
Sbjct:   70 IKMEEERLAAKKKTEAAAKK---AELRKEAAYVAASGATIGLVAGGLLDGALANGDAPWAPIVGLGVGGGLLYAGGNLDNKLGEVLRFSFGGLAQGTQAAVTNAAKGTADAVVQGAKAQVENAKTSIQSAP 197          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6326.14974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JA01_9PHAE1.020e-8762.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U4HT34_9STRA3.720e-838.16Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YG73_9STRA8.400e-739.69Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 337..354
score: 38.89
coord: 273..285
score: 38.46
coord: 314..330
score: 35.29
coord: 361..386
score: 30.0
coord: 290..311
score: 35.45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6326contigL-elsbetiae_contig6326:2386..11011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6326.14974.1mRNA_L-elsbetiae_contig6326.14974.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6326 2386..11011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6326.14974.1 ID=prot_L-elsbetiae_contig6326.14974.1|Name=mRNA_L-elsbetiae_contig6326.14974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=729bp
GEIGKSDLEKLVKDKEATEIKAAEQQKADRVRQEAQTKRQLAAQEKMDAI
MVAGAAASIGLVAGGLGDGAFAGGDAPWAPPLGAVALGGLGYAAATADGE
IGSTTRAVVGGFVAKLLASLKAAAASAADNAKAAAVNKVDETVASIKAVP
VTAQAAAKQRADDLVAYVKNIPDTVAKAVKAAAKTAQDKAKAKTDSIIAD
IKAAPQNLKEEATKAGEAAIEELKKVPDKFKGAATEAATTAADTAKKTAD
AKVKELTALPNKVIDEAVSKVEAVLPTPPAAPKPAASKPAAPKPPAPKPA
ASKPAAASAPAASPAKPPAPPAAKIPSKPASKPAASKPAAAKTASAPKPK
APKAASTAAGTKPKASKPSPPPPVAAPVKKMPPLSAPLRTKAGAKASSSP
SSPVAAAAAAPAKKAAAAPAPAPAAKAKASSSPFGGLFGGNGGSSGKSET
SKAATKAPAAAKAPAAKAPPAPAAKAPAAKAKAKAPSSPFGGLFGGNGGG
SSKPEAPKAAAKTPAAAKAPSVKAPAAKAKAPSSPFGGLFGGNGADEKKA
TPAAPPAPAKKAPMLSTPLRSAAKPPARKAAPKAAAPKAAAAKKAPAAKK
AAPAASGGNGGGGMFGMFGGGSKAAAAAPAAAAQAGGKAKASAKGAAATG
FFKPALAEQLTKKMNEDQLKKLDALTAKYANGGSPTAYVNSAAQLVGQGV
VAEILPDLVGSLPQGKQKSDLFTVYSTY*
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