prot_L-elsbetiae_contig6324.14972.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6324.14972.1
Unique Name	prot_L-elsbetiae_contig6324.14972.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	140

Homology

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: D8LH04_ECTSI (Recombinase A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH04_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.690e-57
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHLLEKAQKDREGGVNDTPVTDLE 103
            VAKNKIAPPFR+VEMDILFGTGIDTVSCLLDAAEDAG FTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQ QVRAHLLEKA KDREGGV DTP+TDLE
Sbjct:  316 VAKNKIAPPFRVVEMDILFGTGIDTVSCLLDAAEDAGFFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQDQVRAHLLEKAIKDREGGVADTPITDLE 418

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: A0A4P5VGT3_9CYAN (Protein RecA n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4P5VGT3_9CYAN)

HSP 1 Score: 113 bits (282), Expect = 4.260e-27
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHLLE 84
            VAKNK+APPFRI E DILFG GI TV CLLD AE+ G+ TRKG+WYSYEG N+ QGR NT+A L++N   ++T++ Q R  L E
Sbjct:  266 VAKNKVAPPFRIAEFDILFGRGISTVGCLLDLAEETGVVTRKGAWYSYEGDNIGQGRDNTIAWLEQNPGPKDTIEVQTRRRLTE 349

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: A0A7T1HW89_9SYNE (Protein RecA n=1 Tax=Synechococcus sp. CBW1004 TaxID=1353136 RepID=A0A7T1HW89_9SYNE)

HSP 1 Score: 109 bits (273), Expect = 8.940e-26
Identity = 50/84 (59.52%), Postives = 64/84 (76.19%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHLLE 84
            VAKNK+APPFRI E DILFG GI T+ CLLD AE+ G+ TRKG+WYSYEG N+ QGR NT+  L++N + +ET++   R  L+E
Sbjct:  273 VAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVTRKGAWYSYEGDNIGQGRDNTIGWLEQNPSEKETIEQLTRRKLME 356

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: A0A1Q8ZHP9_9CYAN (Protein RecA n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8ZHP9_9CYAN)

HSP 1 Score: 108 bits (270), Expect = 1.650e-25
Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHL 82
            VAKNK+APPFRI E DI+FG GI T+ CL+D AE+ G+ TRKG+WYSY G N+SQGR N + +L+EN    +TL+ QVR  L
Sbjct:  260 VAKNKVAPPFRIAEFDIIFGKGISTLGCLVDMAEETGVLTRKGAWYSYSGDNISQGRDNAIKYLEENPEFAKTLEQQVRQKL 341

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: UPI0014073AC0 (recombinase RecA n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI0014073AC0)

HSP 1 Score: 108 bits (269), Expect = 1.810e-25
Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAH 81
            VAKNK+APPFRI E DILFG GI T+ CL+D AE+A I  RKG+WYSY G+N+ QGR N +AHL+EN  L   ++ QV+AH
Sbjct:  249 VAKNKVAPPFRIAEFDILFGQGISTLGCLVDMAEEANIVVRKGAWYSYGGENIGQGRDNAMAHLQENPDLLAEIEQQVKAH 329

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: A3Z2F8_9SYNE (Protein RecA n=1 Tax=Synechococcus sp. WH 5701 TaxID=69042 RepID=A3Z2F8_9SYNE)

HSP 1 Score: 105 bits (263), Expect = 2.180e-25
Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHLLE 84
            VAKNK+APPFRI E DILFG GI T+ CLLD AE+ G+  RKG+WYSYEG N+ QGR NT+  +++N     T++T VR  L E
Sbjct:  132 VAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVVRKGAWYSYEGDNIGQGRDNTIVWMEQNPEAATTIETLVRQKLSE 215

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: K9P8Q1_CYAGP (Protein RecA n=7 Tax=Cyanobacteria TaxID=1117 RepID=K9P8Q1_CYAGP)

HSP 1 Score: 108 bits (270), Expect = 2.520e-25
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHLLE 84
            VAKNK+APPFRI E DILFG GI T+ CLLD AE+ G+ +RKG+WYSYEG N+ QGR NT+A L++N   +E ++T  R  L E
Sbjct:  278 VAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVSRKGAWYSYEGDNIGQGRDNTIAWLEQNPGPKEVIETLTRQKLTE 361

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: A0A4P7ZVP2_9SYNE (Protein RecA n=9 Tax=Synechococcaceae TaxID=1890426 RepID=A0A4P7ZVP2_9SYNE)

HSP 1 Score: 107 bits (268), Expect = 3.510e-25
Identity = 51/84 (60.71%), Postives = 62/84 (73.81%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHLLE 84
            VAKNK+APPFRI E DILFG GI TV CLLD AE+ G+  RKG+WYSYEG N+ QGR NT+  L++N   +E ++ QVR  L E
Sbjct:  260 VAKNKVAPPFRIAEFDILFGRGISTVGCLLDLAEENGVVVRKGAWYSYEGDNIGQGRDNTITWLEQNPEPKEQIERQVREKLSE 343

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: A0A5J6Q4U6_9SYNE (Protein RecA n=1 Tax=Synechococcus sp. RSCCF101 TaxID=2511069 RepID=A0A5J6Q4U6_9SYNE)

HSP 1 Score: 107 bits (268), Expect = 4.770e-25
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHLLEKA 86
            VAKNK+APPFRI E DILFG GI T+ CLLD AE+ G+  RKG+WYSY G N+ QGR NT+  L++N    +T++T+VR  L E A
Sbjct:  265 VAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYNGDNIGQGRDNTIGWLEQNSEPAQTIETEVRRRLTEGA 350

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BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Match: RECA_SYNSC (Protein RecA n=14 Tax=Terrabacteria group TaxID=1783272 RepID=RECA_SYNSC)

HSP 1 Score: 107 bits (267), Expect = 4.840e-25
Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 0

Query:    1 VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEGKNVSQGRLNTVAHLKENQALRETLQTQVRAHLLE 84
            VAKNK+APPFRI E DILFG GI T+ CLLD AE+ G+  RKG+WYSYEG N+ QGR NT++ ++EN     T++T VR  L E
Sbjct:  257 VAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVVRKGAWYSYEGDNIGQGRDNTISWMEENPDATATIETLVRQKLTE 340

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6324.14972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LH04_ECTSI	1.690e-57	94.17	Recombinase A n=2 Tax=Ectocarpus TaxID=2879 RepID=...	[more]
A0A4P5VGT3_9CYAN	4.260e-27	61.90	Protein RecA n=1 Tax=Cyanobium sp. TaxID=2164130 R...	[more]
A0A7T1HW89_9SYNE	8.940e-26	59.52	Protein RecA n=1 Tax=Synechococcus sp. CBW1004 Tax...	[more]
A0A1Q8ZHP9_9CYAN	1.650e-25	59.76	Protein RecA n=1 Tax=Leptolyngbya sp. 'hensonii' T...	[more]
UPI0014073AC0	1.810e-25	61.73	recombinase RecA n=1 Tax=Aphanocapsa montana TaxID...	[more]
A3Z2F8_9SYNE	2.180e-25	58.33	Protein RecA n=1 Tax=Synechococcus sp. WH 5701 Tax...	[more]
K9P8Q1_CYAGP	2.520e-25	59.52	Protein RecA n=7 Tax=Cyanobacteria TaxID=1117 RepI...	[more]
A0A4P7ZVP2_9SYNE	3.510e-25	60.71	Protein RecA n=9 Tax=Synechococcaceae TaxID=189042...	[more]
A0A5J6Q4U6_9SYNE	4.770e-25	58.14	Protein RecA n=1 Tax=Synechococcus sp. RSCCF101 Ta...	[more]
RECA_SYNSC	4.840e-25	59.52	Protein RecA n=14 Tax=Terrabacteria group TaxID=17...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023400	DNA recombination and repair protein RecA, C-terminal	GENE3D	3.30.250.10		coord: 25..101 e-value: 7.0E-17 score: 63.4
IPR023400	DNA recombination and repair protein RecA, C-terminal	SUPERFAMILY	54752	RecA protein, C-terminal domain	coord: 26..81
None	No IPR available	PANTHER	PTHR45900	FAMILY NOT NAMED	coord: 1..96
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900:SF1	MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG	coord: 1..96
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 1..28 score: 8.78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6324	contig	L-elsbetiae_contig6324:9427..10919 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6324.14972.1	mRNA_L-elsbetiae_contig6324.14972.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6324 9427..10919 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6324.14972.1 ID=prot_L-elsbetiae_contig6324.14972.1|Name=mRNA_L-elsbetiae_contig6324.14972.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
VAKNKIAPPFRIVEMDILFGTGIDTVSCLLDAAEDAGIFTRKGSWYSYEG
KNVSQGRLNTVAHLKENQALRETLQTQVRAHLLEKAQKDREGGVNDTPVT
DLEAAAAGGGGGGAGEVLGGMPPARRPSASVEEGAAATV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023400	RecA_C
IPR013765	DNA_recomb/repair_RecA
IPR020587	RecA_monomer-monomer_interface