prot_L-elsbetiae_contig6324.14969.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6324.14969.1
Unique Nameprot_L-elsbetiae_contig6324.14969.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length367
Homology
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: A0A6H5KMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF0_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 5.950e-105
Identity = 207/342 (60.53%), Postives = 235/342 (68.71%), Query Frame = 0
Query:    1 MLKTAAGGEREDIGRALRAAKADSFSTDQARRLREARVTGVTCASATIPLLTRPPPASSPAPCNPRAAAGSIHGGS-RNHFTVRAT---TGGVETAG--RRLGGSSGXXXXXXXXXXXXXXXXRARFSGTGAAXXXXXXXXXXXGRRQQGYDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANGDTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRAG 336
            MLKTA G ER++IGRAL+A+KA+SF+TDQA+RLREARVTGVTCASAT+PLLTRPP +  P P       G + GG+  N    R T   TGG +TAG  +R  G +G                R    G G+ X          GRR+ GYDIVVLDECSQI+EPMSLLP+AVA+PRRLVLVGDPMQLPPPVA A++   A                           WLEK NA   NGDTLEKTLFVRLA+LGV PL+LGRQYRCHP++SALASRLFYQGRLTDGVA  DR PLVPGLAPLTLLDAAGRGAESTA GGSI+N FEARAVA +V +LLRAG
Sbjct:  361 MLKTAVGAERDEIGRALQASKAESFTTDQAKRLREARVTGVTCASATVPLLTRPPRSPRPLP-----RGGVVSGGNGSNSVAARKTGVATGGAKTAGPWKRPAGVAGSNG-------------RRLGGGRGSXXERGWSGGGGEGRRR-GYDIVVLDECSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARMPKEA---------------------------WLEKVNARPGNGDTLEKTLFVRLAKLGVQPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVVSLLRAG 656          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: D8LH01_ECTSI (Prematurely terminated mRNA decay factor-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH01_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 4.710e-103
Identity = 213/337 (63.20%), Postives = 242/337 (71.81%), Query Frame = 0
Query:    1 MLKTAAGGEREDIGRALRAAKADSFSTDQARRLREARVTGVTCASATIPLLTRPPPASSPAPCNPRAAAGSIHGGSRNHFTVRATTGGVETAGRRLGGSSGXXXXXXXXXXXXXXXXRARFSGTGAAXXXXXXXXXXXGRRQQGYDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAK-VCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANGDTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRAG 336
            MLKTA G +R++IGRAL+A+KA+SF+TDQ +RLREARVTGVTCASAT+PLLTRPP +  P P       G + GG+ ++ +V A   GV T G +  G                   R    G G+A      XXXXXG R+ GYDIVVLDE SQI+EPMSLLP+AVA+PRRLVLVGDPMQLPPPVA A+   S          XXXXXXXXXX         WLEKANA   NGDTLEKTLFVRLA+LGV PL+LGRQYRCHP++SALASRLFYQGRLTDGVA  DR PLV GLAPLTLLDAAGRGAESTA GGSI+N FEARAVA +V +LLRAG
Sbjct:  261 MLKTAVGADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPLP-----RGGVVSGGNGSNGSVAARKTGVATGGTKTAGP------WKRPAGVAGSNGRLLGGGRGSAGARGWSXXXXXGGRR-GYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVSGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAG 585          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: A0A2P6VEY4_9CHLO (P-loop containing nucleoside triphosphate hydrolase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VEY4_9CHLO)

HSP 1 Score: 133 bits (334), Expect = 2.490e-30
Identity = 85/194 (43.81%), Postives = 107/194 (55.15%), Query Frame = 0
Query:  143 QGYDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANGDTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRAG 336
            Q +D+VVLDECSQ++EP+S +P+  A  R L+  GDP+QLPP VAH    +H A P+GP                         A AG      L + LFVRL  LG+ P +L RQYRCHP +S + ++ FY GRL DG     R  L+PGL  L LLD   RG E  + G S  N  EA AV ALV  L++AG
Sbjct: 1033 QRFDVVVLDECSQMVEPLSAVPLLRAGARFLIAAGDPLQLPPVVAHP---AHVA-PSGP-------------------------APAGGGQRHGLLRPLFVRLQALGLPPFLLRRQYRCHPDISCVPNQQFYGGRLIDGCTREQRASLLPGLPSLALLDV--RGQEQYSGGRSASNQAEAEAVVALVERLVQAG 1195          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: A0A2K3E7V6_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E7V6_CHLRE)

HSP 1 Score: 130 bits (326), Expect = 2.880e-29
Identity = 80/193 (41.45%), Postives = 110/193 (56.99%), Query Frame = 0
Query:  144 GYDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANGDTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRAG 336
            G+ +VVLDECSQ+ EP+ L+P+  A+ R LV  GDP QLPP +A     ++   P    Q                     ++ + G A  D+L + LFVRL +LG AP +L  QYRCHPRLS++A+  FY+GRL DGV  ADR PL+ GL PL  +++ G+ A    +  S  N  EA+ V+ +V ALL  G
Sbjct: 1428 GFTVVVLDECSQMTEPLCLVPLLRAKARFLVAAGDPQQLPPVIASP---ANLTAPAPQHQPGPASGLQWGPGAVGAAGAGSQRGHPGAAT-DSLLRPLFVRLCQLGHAPHLLSYQYRCHPRLSSIANAAFYEGRLRDGVTPADRPPLLVGLPPLVFVESGGQAAVDAYTRSSY-NTQEAQLVSRMVAALLAQG 1615          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: A0A835T389_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T389_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 1.290e-28
Identity = 80/193 (41.45%), Postives = 111/193 (57.51%), Query Frame = 0
Query:  144 GYDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANGDTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRAG 336
            G+ +VVLDECSQ+ EP+ L+P+  AR R LV  GDP QLPP +A     S A++ T P                        +A   +A+ D+L + LFVRL++LG  P +L  QYRCHPRLS++A+  FY+GRL DG+  ADR PL+P L PL  +++ G+ A    +  S  N  EA+ V+ +V  LL  G
Sbjct: 1375 GFTVVVLDECSQMTEPLCLVPLLRARARFLVAAGDPQQLPPVIA-----SPASL-TAPHHQPNHPAHH-------------HQARQRQAHADSLLRPLFVRLSQLGHVPHLLSYQYRCHPRLSSIANAAFYEGRLRDGITPADRPPLLPRLPPLVFVESGGQAAVDAYTRSSY-NTQEAQLVSRVVAVLLEQG 1547          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: F4PUW4_CAVFA (Prematurely terminated mRNA decay factor-like protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PUW4_CAVFA)

HSP 1 Score: 124 bits (311), Expect = 5.650e-28
Identity = 74/192 (38.54%), Postives = 104/192 (54.17%), Query Frame = 0
Query:  145 YDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANGDTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRAG 336
            + IV LDECSQI EP+SLLP+  +R  RLV VGDP+QL P + H+K   H     G                                    LEKTL+VRL++LG+ P++L  QYRCHPR+SAL+++LFY   L DG+  A R PL+  L+P+TL+++     +  +  G   ND EA  + +++  L R G
Sbjct:  130 FPIVFLDECSQITEPLSLLPLCKSRCERLVAVGDPLQLEPTL-HSKPSQHVLDTGG------------------------------------LEKTLYVRLSKLGLQPVILKTQYRCHPRISALSNKLFYDNALNDGILPASRPPLISNLSPITLIESDIGSEQHDSFTGGFYNDGEANLIFSMIDILTRNG 284          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: A0A150GZB2_GONPE (AAA domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZB2_GONPE)

HSP 1 Score: 124 bits (312), Expect = 1.820e-27
Identity = 81/195 (41.54%), Postives = 112/195 (57.44%), Query Frame = 0
Query:  145 YDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANG---DTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRAG 336
            + +VVLDECSQ+ EP+SL+P+  AR R LV  GDP+QLPP +A     S A++   P                       E A A  A+    D+L + LFVRL++LG  P +L  QYRCHP ++++A+  FY GRL DGV+ ADR PL+PGL PL  +++ G+     A+  S  N  EA+ VA  V+A+L  G
Sbjct:  779 FTVVVLDECSQMTEPLSLVPLLRARARYLVAAGDPLQLPPVIA-----SPASLMPAPPPH--------------------ETATATAASDGPLDSLLRPLFVRLSQLGHQPHLLSYQYRCHPMVASIANNAFYGGRLRDGVSAADRGPLLPGLPPLVFVESGGQAQVDGATRSSY-NTAEAQLVARAVSAMLDVG 947          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: A0A835VRR1_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VRR1_CHLIN)

HSP 1 Score: 124 bits (312), Expect = 1.950e-27
Identity = 82/206 (39.81%), Postives = 110/206 (53.40%), Query Frame = 0
Query:  144 GYDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCS---HAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANG----------DTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRAG 336
            G+ +VVLDECSQ+ EP+ L+P+  A+ R LV  GDP QLPP +A     +   H   P GP                      L++   G A G          D+L + LFVRL++LG  P +L  QYRCHPRLS++A+  FY GRL DGV  ADR PL+  L PL  +++ G+ A    +  S  N  EA+ V+ +V ALL  G
Sbjct: 1436 GFSVVVLDECSQMTEPLCLVPLLRAKARFLVAAGDPQQLPPVIASPATLTAPQHPQHPAGPAHH-------------------LQQRGPGAAAGGTLGHPGAAADSLLRPLFVRLSQLGHVPHLLSYQYRCHPRLSSIANAAFYGGRLRDGVRPADRPPLLAALPPLVFVESGGQAAVDAYTRSSY-NTQEAQLVSRVVAALLGQG 1621          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: A0A2V0PIX2_9CHLO (P-loop containing nucleoside triphosphate hydrolase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PIX2_9CHLO)

HSP 1 Score: 124 bits (310), Expect = 3.390e-27
Identity = 86/193 (44.56%), Postives = 105/193 (54.40%), Query Frame = 0
Query:  143 QGYDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANGDTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRA 335
            Q +D+VVLDE SQ+ EP SL+P+  +R R ++  GDP+QLPP +AH    + AA                       XXX         A G  L + LFVRL  LG +P +L  QYRCHP LSA+ ++  Y GRL DGV    R PL+PGL PL   D AG GA S  +GGS  N  EA  V  LV ALLRA
Sbjct:  922 QTFDVVVLDEASQMTEPTSLVPLLRSRCRYMIAAGDPLQLPPVIAHPAHLTAAAX----------------------XXXXXXXXXXXXAAGGLL-RPLFVRLTDLGHSPNLLRWQYRCHPALSAIPNKCIYGGRLADGVTAEQRAPLLPGLPPLAFCDLAG-GAASRGAGGSSSNRSEAGLVVRLVGALLRA 1090          
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Match: A0A0D2MWR2_9CHLO (SHSP domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MWR2_9CHLO)

HSP 1 Score: 122 bits (307), Expect = 7.950e-27
Identity = 102/193 (52.85%), Postives = 118/193 (61.14%), Query Frame = 0
Query:  143 QGYDIVVLDECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTGPQQXXXXXXXXXXXXXXXXXXXWLEKANAGRANGDTLEKTLFVRLARLGVAPLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLLDAAGRGAESTASGGSIRNDFEARAVAALVTALLRA 335
            Q +D+VVLDE SQ+ EP SL+P+  A  R L+  GDP+QLPP +A     +   I T P  XXXXXXXXXXXXXXXXXXX              L +TLFVRL +LG  P +L  QYRCHP LSA+ +R  Y GRL DGV  A R PL+PGL PL  +D AG G      GGS  N  EA  V  LV ALLRA
Sbjct:  603 QKFDVVVLDEASQVTEPTSLVPLLRAHCRYLIAAGDPLQLPPVIASPSALT--LINTQPPXXXXXXXXXXXXXXXXXXXXXXXXXGG-------LGRTLFVRLTQLGHQPHLLRWQYRCHPALSAIPNRCVYGGRLRDGVTAAQRGPLLPGLPPLAFVDVAG-GVAQRGQGGSSSNRGEAVLVVRLVGALLRA 785          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6324.14969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMF0_9PHAE5.950e-10560.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH01_ECTSI4.710e-10363.20Prematurely terminated mRNA decay factor-like n=1 ... [more]
A0A2P6VEY4_9CHLO2.490e-3043.81P-loop containing nucleoside triphosphate hydrolas... [more]
A0A2K3E7V6_CHLRE2.880e-2941.45Uncharacterized protein n=2 Tax=Chlamydomonas rein... [more]
A0A835T389_9CHLO1.290e-2841.45Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
F4PUW4_CAVFA5.650e-2838.54Prematurely terminated mRNA decay factor-like prot... [more]
A0A150GZB2_GONPE1.820e-2741.54AAA domain-containing protein n=1 Tax=Gonium pecto... [more]
A0A835VRR1_CHLIN1.950e-2739.81Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A2V0PIX2_9CHLO3.390e-2744.56P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0D2MWR2_9CHLO7.950e-2752.85SHSP domain-containing protein n=1 Tax=Monoraphidi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 141..186
e-value: 5.8E-11
score: 42.7
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 237..336
e-value: 3.9E-12
score: 46.2
NoneNo IPR availableGENE3D3.40.50.300coord: 259..344
e-value: 7.9E-12
score: 46.8
NoneNo IPR availablePANTHERPTHR10887:SF463coord: 145..187
NoneNo IPR availablePANTHERPTHR10887:SF463coord: 232..343
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 145..187
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 232..343
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 140..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6324contigL-elsbetiae_contig6324:1701..4950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6324.14969.1mRNA_L-elsbetiae_contig6324.14969.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6324 297..7569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6324.14969.1 ID=prot_L-elsbetiae_contig6324.14969.1|Name=mRNA_L-elsbetiae_contig6324.14969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=367bp
MLKTAAGGEREDIGRALRAAKADSFSTDQARRLREARVTGVTCASATIPL
LTRPPPASSPAPCNPRAAAGSIHGGSRNHFTVRATTGGVETAGRRLGGSS
GSGSGSSGGGGGGGGGARARFSGTGAAGGAGGAARGRRGRRQQGYDIVVL
DECSQIIEPMSLLPIAVARPRRLVLVGDPMQLPPPVAHAKVCSHAAIPTG
PQQQQPRHASSGGGGGGGGGGGWLEKANAGRANGDTLEKTLFVRLARLGV
APLVLGRQYRCHPRLSALASRLFYQGRLTDGVAEADRRPLVPGLAPLTLL
DAAGRGAESTASGGSIRNDFEARAVAALVTALLRAGAGGGGLGATWTGGR
PGGRRRPGSYPPLASA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase