prot_L-elsbetiae_contig631.14953.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig631.14953.1
Unique Nameprot_L-elsbetiae_contig631.14953.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length528
Homology
BLAST of mRNA_L-elsbetiae_contig631.14953.1 vs. uniprot
Match: A0A6H5KCA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA4_9PHAE)

HSP 1 Score: 573 bits (1476), Expect = 2.680e-199
Identity = 350/531 (65.91%), Postives = 381/531 (71.75%), Query Frame = 0
Query:    1 MGRDLTAVFTSSLVLLLCPRPDAFVPSPKL-VKFTALPPSP-DVLGNLPWII---PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-DAPQSVA-FRVLRGGRGNTLGDDGGGSSRRRPEADLVEVSLDQGVGXXXXXXXXXXXXXLVNAAENLRDFLFLVRSSQPGSIGEELQRRGVRVFPEEAFVDDAGVEAEGGGAAGARGRAAEDLSRFSLVGWGG--PLPLDTAVTDLPKDEEGRVRLVLWDPCGPEHPLARAVGGGPGEQASIEVLNFLLDGDGAR-DGGGGXXXXXXXXXXXXXXXXXXCSRGYGGDFDESRSAVVFRDWFTEEQQQVIADALAAQMFDEDDGEGPGLAVDREHFPLLRDRAALAAVGDGMLSALSSDRFSGQVGGRAPPVPTRANREFNAVCYGAQAKMQEHRDTWKEWTLIISIGNTIPFDLGTCQGSPDVRLELASGEGLLFNGYELFHEVHGVRHGTAPAFWENHALSVKGGFARVGFLSMKSFNSKGVSAPTWGPERGALA 521
            MGRDLTA+FTSSLV+LLCP PDAFVPS ++    +A PP P   +  LP      P                XXXXXXXXXXXXXXXXXXXXXT + P SV  FRVLRGG           ++   PEADLVEVSLD+                + N  ++LR+FLFLVRSSQPGSIGE+LQRRGVRVFPEEAF D    EAE                    VGW G  PLPLDT +T+LP+D EGRVRLVLWDPCGP+HPL RAV   P + AS+EVLNFLL GD  R DGG G                  CS GYG DFDESRSAVVFR WFT EQQQVIAD+LA+Q+F EDD EGPGL VDREHFPLLRDRA LAAVGD MLSALSSDRFSG+VGGR PPVPTRANREFNAVCYGAQAKMQEHRDTWKEWTLI+SIGNTIPFDLG  +G PD+RLELASGEGLLFNGYELFHEVHGV+ GTAPAFWE HALS KGGFARVGFLSMKSFNSKGVSAPTWG E+G+ A
Sbjct:    1 MGRDLTAIFTSSLVVLLCPGPDAFVPSARIGPPLSAAPPRPRHRVEGLPLTRRTRPSLPCTRSSAQQQADNRXXXXXXXXXXXXXXXXXXXXXTANGPASVVRFRVLRGGNPRD------NAAAATPEADLVEVSLDR----------PDSGGGMANNPQDLREFLFLVRSSQPGSIGEDLQRRGVRVFPEEAFAD---AEAE--------------------VGWAGGRPLPLDTPMTELPRDGEGRVRLVLWDPCGPDHPLVRAVSVEPSKDASVEVLNFLLPGDRRRHDGGEGTAGDGGG-----------CSSGYGRDFDESRSAVVFRKWFTVEQQQVIADSLASQIFAEDDDEGPGLDVDREHFPLLRDRAGLAAVGDSMLSALSSDRFSGEVGGRDPPVPTRANREFNAVCYGAQAKMQEHRDTWKEWTLIVSIGNTIPFDLGMSKGRPDIRLELASGEGLLFNGYELFHEVHGVKPGTAPAFWETHALSAKGGFARVGFLSMKSFNSKGVSAPTWGVEKGSSA 481          
BLAST of mRNA_L-elsbetiae_contig631.14953.1 vs. uniprot
Match: D7FS11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS11_ECTSI)

HSP 1 Score: 546 bits (1407), Expect = 8.360e-189
Identity = 296/433 (68.36%), Postives = 318/433 (73.44%), Query Frame = 0
Query:   90 DAPQSVA-FRVLRGGRGNTLGDDGGGSSRRRPEADLVEVSLDQGVGXXXXXXXXXXXXXLVNAAENLRDFLFLVRSSQPGSIGEELQRRGVRVFPEEAFVDDAGVEAEGGGAAGARGRAAEDLSRFSLVGWGG--PLPLDTAVTDLPKDEEGRVRLVLWDPCGPEHPLARAVGGGPGEQASIEVLNFLLDGDGAR-DGGGGXXXXXXXXXXXXXXXXXXCSRGYGGDFDESRSAVVFRDWFTEEQQQVIADALAAQMFDEDDGEGPGLAVDREHFPLLRDRAALAAVGDGMLSALSSDRFSGQVGGRAPPVPTRANREFNAVCYGAQAKMQEHRDTWKEWTLIISIGNTIPFDLGTCQGSPDVRLELASGEGLLFNGYELFHEVHGVRHGTAPAFWENHALSVKGGFARVGFLSMKSFNSKGVSAPTWGPERG 518
            + P SV  FRVLRGG  N   +         PEADLVEVSLD+                + N  ++LR+FLFLVRSSQPGSIGE+LQRRGVRVFPEEAF D       G                 S VGW G  PLPLDT +T+LP+D EGRVRLVLWDPCGP HPL RAV   P + AS+ VLNFLL  D  R DGG G                  CS GYG DF+ESRSAVVFR WFT EQQQVIAD+LA+QMF EDD EGPGL VDREHFPLLRDRAALAAVGD MLSALSSDRFSG+VGGR PPVPTRANREFNAVCYGAQAKMQEHRDTWKEWTLI+SIGNTIPFDLG  QG PD+RLELASGEGLLFNGYELFHEVHGV+ GTAPAFWENHAL+ KGGFARVGFLSMKSFNSKGVSAPTWG E+G
Sbjct:   78 NGPASVVRFRVLRGG--NPRDNAAAXXXAATPEADLVEVSLDR----------PDSGGGMANNPQDLREFLFLVRSSQPGSIGEDLQRRGVRVFPEEAFADAEAELGAGXXXXXXXXXXXXGEEGLSGVGWTGGRPLPLDTPMTELPRDGEGRVRLVLWDPCGPTHPLVRAVSVEPSKDASVMVLNFLLPEDSRRHDGGEGTAGEGGG-----------CSSGYGSDFNESRSAVVFRKWFTVEQQQVIADSLASQMFAEDDDEGPGLDVDREHFPLLRDRAALAAVGDSMLSALSSDRFSGEVGGRDPPVPTRANREFNAVCYGAQAKMQEHRDTWKEWTLIVSIGNTIPFDLGVSQGRPDIRLELASGEGLLFNGYELFHEVHGVKPGTAPAFWENHALNAKGGFARVGFLSMKSFNSKGVSAPTWGVEKG 487          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig631.14953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCA4_9PHAE2.680e-19965.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS11_ECTSI8.360e-18968.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..527
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig631contigL-elsbetiae_contig631:16690..23161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig631.14953.1mRNA_L-elsbetiae_contig631.14953.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig631 16690..23386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig631.14953.1 ID=prot_L-elsbetiae_contig631.14953.1|Name=mRNA_L-elsbetiae_contig631.14953.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=528bp
MGRDLTAVFTSSLVLLLCPRPDAFVPSPKLVKFTALPPSPDVLGNLPWII
PPPNSVQQGASNPPDSSSSSSSSSSPQGEPAPQRPPPPTDAPQSVAFRVL
RGGRGNTLGDDGGGSSRRRPEADLVEVSLDQGVGGGGGGGGGGGGGGLVN
AAENLRDFLFLVRSSQPGSIGEELQRRGVRVFPEEAFVDDAGVEAEGGGA
AGARGRAAEDLSRFSLVGWGGPLPLDTAVTDLPKDEEGRVRLVLWDPCGP
EHPLARAVGGGPGEQASIEVLNFLLDGDGARDGGGGEGGEAGGGDRAGGR
ASGGCSRGYGGDFDESRSAVVFRDWFTEEQQQVIADALAAQMFDEDDGEG
PGLAVDREHFPLLRDRAALAAVGDGMLSALSSDRFSGQVGGRAPPVPTRA
NREFNAVCYGAQAKMQEHRDTWKEWTLIISIGNTIPFDLGTCQGSPDVRL
ELASGEGLLFNGYELFHEVHGVRHGTAPAFWENHALSVKGGFARVGFLSM
KSFNSKGVSAPTWGPERGALAPTTPEG*
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