prot_L-elsbetiae_contig631.14952.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig631.14952.1
Unique Nameprot_L-elsbetiae_contig631.14952.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length389
Homology
BLAST of mRNA_L-elsbetiae_contig631.14952.1 vs. uniprot
Match: D7FS10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS10_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 5.490e-186
Identity = 303/371 (81.67%), Postives = 327/371 (88.14%), Query Frame = 0
Query:   21 GIVPLGGGARRASIFDRIADVVFNEEQKDQDPVDAVAIRTELEDEFSVSFREGAMGMTLSMNSDTRDAVVGKIVEQGQAFRAGVQTDDFVVGVGEHSVSSYGTVLAFMNIMGRPIELHFRKADPSSGKGGXXXXXXXXXXXXXXXXXXXXXXSAAAPEGFPSTS---MSKPGRMPMRGSLERARGDSLSRMFKGA-GTNSGGGKAPISPISPRTSSRVSELGALGHEVASSDSGFSQKMEHGVVVTKYGKKGTAAQRVLYLDSASMSVAWRDLDARSPGHSRSTSFTNIIKGKREALALAHLIEVVAGDDPDPTRPSENGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGFRDLRDQYG 387
            G+VPLGGGARRASIFDRIADVVFNEEQK QDPVDA+A+R+ELEDEF VSFREGAMGMTLSM+ DTRDA+VGKIVEQGQAFRAG+QTDD V+GVGE++VSSYGTVLAFMNIMGRPIELHFRK+D  SG G XXXXXXX   X XXXXXXXXXXSAA PEGF +T    +SK G  P+RG+LE  RGDSLSR  KGA G  S GG AP SPISPR+  +VS    LG EVASSD+GFS+KMEHGVVVTKYGKKG AAQR+LYLD  SMSVAWRDLDARSPGHSRS+S TNIIKGKREALALAHL+EV+AGDDPDPTRPSE GSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGFRDL+ QYG
Sbjct:  154 GVVPLGGGARRASIFDRIADVVFNEEQKKQDPVDAIAVRSELEDEFRVSFREGAMGMTLSMDPDTRDAIVGKIVEQGQAFRAGIQTDDLVIGVGENTVSSYGTVLAFMNIMGRPIELHFRKSDKGSGDGXXXXXXXXISAXHXXXXXXXXXXSAAKPEGFRATKAGGVSKSG--PIRGNLEGTRGDSLSRKLKGAAGVKSAGGIAPRSPISPRSQGKVSGFSGLGREVASSDAGFSEKMEHGVVVTKYGKKGAAAQRLLYLDGVSMSVAWRDLDARSPGHSRSSSLTNIIKGKREALALAHLLEVIAGDDPDPTRPSEKGSAMLREHCDESLLERSFALQFKERSLEMTCDSHAEMRQLVAGFRDLQKQYG 522          
BLAST of mRNA_L-elsbetiae_contig631.14952.1 vs. uniprot
Match: A0A835YTV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.580e-9
Identity = 44/108 (40.74%), Postives = 60/108 (55.56%), Query Frame = 0
Query:   53 VDAVAIRTELEDEFSVSFREGAMGMTLSMNSDTRDAVVGKIVEQGQAFRAGVQTDDFVVGVGEHSVSS-----------------YGTVLAFMNIMGRPIELHFRKAD 143
            VD  A+R  L  EFSV F EG++GM+L + +    A V K+VE+GQA   GV+  D V  VG+   +S                 YGT LAF+NI+GRP+ L F+K +
Sbjct: 1211 VDWSALRRALPKEFSVEFNEGSIGMSL-VRTAADTAEVSKVVERGQAHTGGVKAGDVVSAVGDSVATSMNXXXXXXXXXXXXXXXYGTTLAFLNILGRPVTLWFQKGE 1317          
BLAST of mRNA_L-elsbetiae_contig631.14952.1 vs. uniprot
Match: A0A6U1C867_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1C867_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.140e-5
Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 0
Query:  251 FSQKMEHGVVVTKYGKKGTAAQRVLYLDSASMSVAWR-----DLDARSP-GHSRSTSFTNIIKGKREALALAHLIEVVAGDDPDPTRPSENGSAMLREHCDESLLERSF-------ALQFKERSLEMTCDSHAEMRQLVAGFRDLRDQ 385
            F +K+E+GV V K+ ++G AA R+L L     S+ W        D R   G S    F+     K ++  L  L EV  G+ PDP  P + G+  LR H  +    R         +L F +R++++  +S A+ + L  GF  LR++
Sbjct:  169 FKEKLENGVQVVKFNRRGQAAFRLLVLKEDGRSLTWSVPRGTQADGRLGFGQSVRRKFS----AKSDSFDLRSLSEVRLGEAPDPAFPGKFGTETLRMHASKYAQIRQMQEHGLCVSLIFPDRTVDLGSNSQAQRQFLTRGFGLLRNR 312          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig631.14952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FS10_ECTSI5.490e-18681.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTV8_9STRA2.580e-940.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1C867_9STRA1.140e-530.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 55..145
e-value: 5.7E-5
score: 25.0
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 72..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig631contigL-elsbetiae_contig631:10341..13902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig631.14952.1mRNA_L-elsbetiae_contig631.14952.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig631 10175..14533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig631.14952.1 ID=prot_L-elsbetiae_contig631.14952.1|Name=mRNA_L-elsbetiae_contig631.14952.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=389bp
MSGGRLHGNRYSDGGGGDESGIVPLGGGARRASIFDRIADVVFNEEQKDQ
DPVDAVAIRTELEDEFSVSFREGAMGMTLSMNSDTRDAVVGKIVEQGQAF
RAGVQTDDFVVGVGEHSVSSYGTVLAFMNIMGRPIELHFRKADPSSGKGG
SGSGGGPISISKANAAGGSGGGSAAAPEGFPSTSMSKPGRMPMRGSLERA
RGDSLSRMFKGAGTNSGGGKAPISPISPRTSSRVSELGALGHEVASSDSG
FSQKMEHGVVVTKYGKKGTAAQRVLYLDSASMSVAWRDLDARSPGHSRST
SFTNIIKGKREALALAHLIEVVAGDDPDPTRPSENGSAMLREHCDESLLE
RSFALQFKERSLEMTCDSHAEMRQLVAGFRDLRDQYGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf