prot_L-elsbetiae_contig6298.14924.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6298.14924.1
Unique Nameprot_L-elsbetiae_contig6298.14924.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length326
Homology
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5JF58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF58_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.250e-15
Identity = 71/181 (39.23%), Postives = 98/181 (54.14%), Query Frame = 0
Query:    3 EVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGY-------GARPL------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPP--PQPSRGHAPGSGGH-QGRHPGGRGFEEHQP 158
            E+LR   +E++   R G+G+EE R A VAAG GR   A K    G+   G+         +PL      FC++HGPNS+H TS+C  LR EF  + ++F  ++  +  A  S+  RG        + GPYRQQ  ++  GA WSRG  P  P P RG   G+GG  QGR+ GGRG+  + P
Sbjct:   75 EMLRLEEHELRYERRAGEGKEEMRHALVAAGVGRGGEAGKQAAAGSEQGGHRLQHPQRSVQPLQQQPSHFCQLHGPNSTHETSECHKLRNEFLAHYNEFCAYMSGRREAQASVFPRGGAQDSGRMVGGPYRQQPYQNEQGAGWSRGHSPALPGPPRGQGSGTGGQLQGRNSGGRGYGGYGP 255          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5KCW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW8_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 9.840e-15
Identity = 70/183 (38.25%), Postives = 98/183 (53.55%), Query Frame = 0
Query:    1 LNEVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGY-------GARPL------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPP--PQPSRGHAPGSGGH-QGRHPGGRGFEEHQP 158
            + E+LR   +E++   R G+G+EE R A VAAG GR   A K    G+   G+         +P       FC++HGPNS+H TS+C  LR EF  + ++F  ++  +  A  S+  RG        + GPYRQQ  ++  GA WSRG  P  P P RG   G+GG  QGR+ GGRG+  + P
Sbjct:  224 MQEMLRLEEHELRYERRAGEGKEEMRHALVAAGVGRGGEAGKPAAAGSEQGGHRLQQPQRSVQPHQQQPSHFCQLHGPNSTHETSECHKLRNEFLAHYNEFCAYMSGRREAQASVFPRGGAQDSGRMLGGPYRQQPYQNEQGAGWSRGHSPALPGPPRGQGSGTGGQLQGRNSGGRGYGGYGP 406          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5K7Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y0_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.410e-14
Identity = 71/183 (38.80%), Postives = 99/183 (54.10%), Query Frame = 0
Query:    1 LNEVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRG------------YGARPL-FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPP--PQPSRGHAPGSGGH-QGRHPGGRGFEEHQP 158
            + E+LR   +E++   R G+G+EE R A VAAG GR  GA K    G+   G            +  +P  FC++HGPNS+H TS+C  LR EF  + ++F  ++  +  A  S+  RG        + GP RQQ  ++  GA WSRG  P  P P RG   G+GG  QGR+PGGRG+  + P
Sbjct:  283 IQEMLRLEKHELRYERRHGEGKEEMRHALVAAGVGRGGGAGKPAAAGSEQGGDRLQQPQGSVQPHQQQPSHFCQLHGPNSTHETSECRKLRHEFLAHYNEFCAYMSGRREAQGSVFPRGGAQDSGRMVGGPSRQQPYQNEQGAGWSRGHSPALPGPPRGPGSGAGGQLQGRNPGGRGYGGYGP 465          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5JXD4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD4_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.920e-13
Identity = 69/183 (37.70%), Postives = 96/183 (52.46%), Query Frame = 0
Query:    1 LNEVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGY-------GARPL------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPP--PQPSRGHAPGSGGH-QGRHPGGRGFEEHQP 158
            + E+LR   +E++   R G+G+EE R A VAAG G    A K    G+   G+         +P       FC++HGPNS+H TS+C  LR EF  +  +F  ++  +  A  S+  RG        + GPYRQQ  ++  GA WSRG  P  P P RG   G+GG  QGR+ GGRG+  + P
Sbjct:  357 MQEMLRLEEHELRYERRAGEGKEEMRHALVAAGVGLGGEAGKPAAAGSEQGGHRLQQPQTSVQPHQQQPSHFCQLHGPNSTHETSECHKLRNEFLAHYSEFCAYMSGRREAQASVFPRGGAQDSGRMVGGPYRQQPYQNEQGAGWSRGHSPALPGPPRGQGSGTGGQLQGRNSGGRGYGGYGP 539          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5JD49_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD49_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.460e-13
Identity = 69/183 (37.70%), Postives = 97/183 (53.01%), Query Frame = 0
Query:    1 LNEVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGY-------GARPL------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPP--PQPSRGHAPGSGGH-QGRHPGGRGFEEHQP 158
            + E+LR   +E++   R  +G+EE R AFVAAG GR   A K    G+   G+         +P       FC++HGPNS+H TS+C  LR EF  + ++F  ++  +  A  S+  RG        + GP RQQ  ++  GA WSRG  P  P P RG   G+GG  QGR+ GGRG+  + P
Sbjct:  283 MQEMLRLEEHELRYERRAAEGKEEMRHAFVAAGVGRGGEAGKPAAAGSEQGGHRLQQPQRSVQPHQQQPSHFCQLHGPNSTHETSECHKLRNEFLAHYNEFCAYMSGRREAQGSVFPRGGAQDSGRMVGGPSRQQPYQNEQGAGWSRGHSPALPGPPRGPGSGAGGQLQGRNSGGRGYGRYGP 465          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5KQJ6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ6_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 8.890e-13
Identity = 70/186 (37.63%), Postives = 97/186 (52.15%), Query Frame = 0
Query:    1 LNEVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGY------GARPL----------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPP--PQPSRGHAPGSGGH-QGRHPGGRGFEEHQP 158
            + E+LR   +E++   R G+ +EE R A VAAG GR  GA K    G+   G+      G+ PL          FC++HGPNS+H TS+C  LR EF  + ++F  ++  +  A   +  RG        + GP RQQ  ++  GA WSRG  P  P P RG   G+GG  QGR+ GGRG   + P
Sbjct:  149 MQEMLRMEEHELRYERRDGERKEEMRHALVAAGVGRGGGAGKPAAAGSEQGGHRPQQPQGSLPLHQQNQQQPSHFCQLHGPNSTHETSECEKLRNEFIAHYNEFCAYMSGRREAQGFVFPRGGAQHSGRMVGGPSRQQPYQNEQGAGWSRGHSPALPGPPRGPGSGAGGQLQGRNSGGRGHGGYGP 334          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5JLU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLU1_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.160e-12
Identity = 67/183 (36.61%), Postives = 95/183 (51.91%), Query Frame = 0
Query:    1 LNEVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGYGARPL-------------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPP--PQPSRGHAPGSGGH-QGRHPGGRGFEEHQP 158
            + E+LR   +E++   R G+G+EE R A VAAG GR   A K    G+   G+  +               FC++HGPNS+H TS+C  LR EF  + ++F  ++  +  A  S+  RG        + GP RQQ  ++  GA WSRG  P  P P RG   G+GG  QG + GGRG+  + P
Sbjct:    7 MQEMLRLEEHELRSERRAGEGKEEMRHALVAAGMGRGGEAGKPAAAGSEQGGHRLQQPQRSVQSHQQQPSHFCQLHGPNSTHETSECHKLRNEFLAHYNEFCAYMSGRREAQASVFPRGGAQDSGRMVGGPSRQQPYQNEQGAGWSRGHSPALPGPPRGQGSGTGGQLQGHNSGGRGYGGYGP 189          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5KPN8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN8_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 8.590e-12
Identity = 68/178 (38.20%), Postives = 94/178 (52.81%), Query Frame = 0
Query:    1 LNEVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGY-------GARPL------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRG-AMDG------PYRQQS-RHHPGAMWSRGRPP--PQPSRGHAPGSGGH-QGRHPGGRGF 153
            + E+LR   +E++   R G+G+EE R A VAAG GR   A K    G+   G+         +P       FC++HGPNS+H TS+C  LR E   + ++F  ++  +  A   +  RG A D       PYRQQ  ++  GA WSRG  P  P P RG   G+GG  QGR+ GGRG+
Sbjct:  283 MQEMLRLEEHELRYERRAGEGKEEMRHALVAAGVGRGGEAGKPAAAGSEQGGHRLQQPQRSVQPHQQQPSHFCQLHGPNSTHETSECHKLRNEILAHYNEFCAYMSGRREAQALVFPRGGAQDSGRMVGDPYRQQPYQNEQGAGWSRGHSPALPGPPRGQGSGTGGQLQGRNSGGRGY 460          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5JC40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC40_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 9.300e-12
Identity = 60/163 (36.81%), Postives = 84/163 (51.53%), Query Frame = 0
Query:    1 LNEVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGY-------GARPL------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPPPQPSRGHAPGSG 141
            + E+LR   +E++   R G+G+EE R A VAAG GR   A K    G+   G+         +P       FC++HGPNS+H TS+C  LR EF  + ++F  ++  +  A  S+  RG        +DGPYRQQ  ++  G  WSRG  P  P   H  GSG
Sbjct:  834 MQEMLRLEEHELRYERRAGEGKEEMRHALVAAGVGRGGEAGKPAAAGSEQGGHRLQQPQRSVQPHQQQPSHFCQLHGPNSTHETSECHKLRNEFLAHYNEFCAYMSGRREAQASVFPRGGSQDSGRMVDGPYRQQPYQNEQGTGWSRGYSPALPGPPHGQGSG 996          
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Match: A0A6H5JWT3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT3_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 4.360e-9
Identity = 56/150 (37.33%), Postives = 75/150 (50.00%), Query Frame = 0
Query:    3 EVLRTASYEMQRSGRKGKGREE-RIAFVAAGAGRSRGAAKNGDHGAWGRGYGARPL-------------FCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPSIGGRGA-------MDGPYRQQS-RHHPGAMWSRGRPPP 130
            EV R   YE     R G+G+EE R A VAAG GR   A K    G+   G+  +               FC++HGPNS+H TS+C  LR EF  + ++F  ++  +  A  S+  RG        + GPYRQQ  ++  GA WSRG  PP
Sbjct:   10 EVGRVLRYER----RAGEGKEEMRHALVAAGVGRGGEAGKPAAAGSEQGGHRLQQPQRSMQPHQQQPSHFCQLHGPNSTHETSECHKLRNEFLAHYNEFCAYMSGRREAQASVFPRGGAQDSGRMVGGPYRQQPYQNEQGAGWSRGHSPP 155          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6298.14924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JF58_9PHAE1.250e-1539.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCW8_9PHAE9.840e-1538.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Y0_9PHAE1.410e-1438.80Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JXD4_9PHAE1.920e-1337.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JD49_9PHAE2.460e-1337.70Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQJ6_9PHAE8.890e-1337.63Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JLU1_9PHAE1.160e-1236.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPN8_9PHAE8.590e-1238.20Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JC40_9PHAE9.300e-1236.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWT3_9PHAE4.360e-937.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6298contigL-elsbetiae_contig6298:4..981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6298.14924.1mRNA_L-elsbetiae_contig6298.14924.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6298 4..983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6298.14924.1 ID=prot_L-elsbetiae_contig6298.14924.1|Name=mRNA_L-elsbetiae_contig6298.14924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp
LNEVLRTASYEMQRSGRKGKGREERIAFVAAGAGRSRGAAKNGDHGAWGR
GYGARPLFCKMHGPNSSHGTSDCIILRKEFEKNCDQFADFLCTQPGAVPS
IGGRGAMDGPYRQQSRHHPGAMWSRGRPPPQPSRGHAPGSGGHQGRHPGG
RGFEEHQPQHGRGQSGGNSGGGMSGGSGAGGGQAGVGNGAKASGYGGNFP
QSNSPPGRPCSNGPRHAFPSRFLPDFGGGGYDGSCGGSADGKYDYGHPSK
SGECHQQQQSHQDGTLPASSPSASSPSSAPGPSASGAPLHFAGIALSVPR
AKSDVTDSVSGVRVGSGVTGSVPGVR
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