prot_L-elsbetiae_contig6286.14910.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6286.14910.1
Unique Nameprot_L-elsbetiae_contig6286.14910.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length343
Homology
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BLAST of mRNA_L-elsbetiae_contig6286.14910.1 vs. uniprot
Match: D7FIE4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIE4_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 2.140e-125
Identity = 203/348 (58.33%), Postives = 243/348 (69.83%), Query Frame = 0 
Query:    1 MIDQDYAELLGRSPPTGDLLEWTFPASALANAFVSLLIGTPALCLALYVA--AGEGDHVSGSVEFRVPTLTRLSIRDTPIGEVYTAGMHLAAAMAIPLFWCVKLSHHQRLQARTGVTRYDLQAEDAVWWVKTAWVVGTLGATLLFAAASVPGDREGSSSSAQGVLHLVLSLLAAGGLIGQTACTAWALRKARRVFVVSEADLVAYRRKVVLASVAVVAALAAVSSVLLVECFADGACGVGYVKSGXXXXXXXXXXXXXXXXXXXXXXMVDFGAGGGDADVAHGAVARNG----TVHHRRDCGSEWCYSRSLMGLWEWLLLLVEAGFCIALRHDLAPATAGVGVESFVL 342
            MIDQDYAELLGRSPP+G++LEWTFPA ALA+AFV LL+GTPALC  LY+   + E     G  E R+PTLT+L +R+ P+G  + AG+ LAA +A+PLFWCVKL+HHQRLQARTGV RYD++AE A+ WV  AW+ G LGA L++AAASVPG+ EG+S S QGV HLVL+  AA G++GQ  CTAWALRKAR VFVVS+ DLVAY+RK+ LAS A + A  AV SVL+VEC   G   +G+   G                          G GG D + A  AV         V   RDC +EWCYSRSL+GLWE+LLL VEAGFC+ALRHDLAPAT GVGVESFVL
Sbjct:    1 MIDQDYAELLGRSPPSGEVLEWTFPARALADAFVLLLVGTPALCCTLYMTGFSREESFHGGGAELRIPTLTQLGMRNNPVGFTFRAGIQLAAVVAVPLFWCVKLAHHQRLQARTGVARYDIEAEGAIRWVSGAWITGALGAMLMYAAASVPGE-EGASFSPQGVTHLVLTTSAACGILGQAVCTAWALRKARLVFVVSDGDLVAYKRKLWLASTAAIVAAVAVLSVLIVECVEGGTWNMGWSIRGGAGAFVGGGGSSS-------------GVGGFDDETA--AVGDQDRWEDNVSSSRDCDTEWCYSRSLLGLWEYLLLAVEAGFCMALRHDLAPATGGVGVESFVL 332
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6286.14910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIE4_ECTSI2.140e-12558.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 187..206
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 228..342
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..186
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..227
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 207..226
NoneNo IPR availableTMHMMTMhelixcoord: 161..186
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6286contigL-elsbetiae_contig6286:4239..7101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6286.14910.1mRNA_L-elsbetiae_contig6286.14910.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6286 4228..7101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6286.14910.1 ID=prot_L-elsbetiae_contig6286.14910.1|Name=mRNA_L-elsbetiae_contig6286.14910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=343bp
MIDQDYAELLGRSPPTGDLLEWTFPASALANAFVSLLIGTPALCLALYVA
AGEGDHVSGSVEFRVPTLTRLSIRDTPIGEVYTAGMHLAAAMAIPLFWCV
KLSHHQRLQARTGVTRYDLQAEDAVWWVKTAWVVGTLGATLLFAAASVPG
DREGSSSSAQGVLHLVLSLLAAGGLIGQTACTAWALRKARRVFVVSEADL
VAYRRKVVLASVAVVAALAAVSSVLLVECFADGACGVGYVKSGGGSSIIS
NGFGGGGGGRGGGGGMVDFGAGGGDADVAHGAVARNGTVHHRRDCGSEWC
YSRSLMGLWEWLLLLVEAGFCIALRHDLAPATAGVGVESFVL*
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