prot_L-elsbetiae_contig626.14862.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig626.14862.1
Unique Nameprot_L-elsbetiae_contig626.14862.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length271
Homology
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: D8LJA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA9_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 4.730e-116
Identity = 196/270 (72.59%), Postives = 216/270 (80.00%), Query Frame = 0
Query:    1 MLWVVVLGKRPALVIIGLIGAFFWLASMAAASVLWTIFPAAQDGWVLTIITGVGLQSFGRIALAKAYVKTEAVVNAAAADAAPXXXXXXXXXXXXRRGDGARGGGDSGXARIGRRXXXXGDESGDRQDQSGLLKLNGVSSSIAAGVGWGLIHAVILVGTALSKHMGPGAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYAVVVISAIALARCGPLRSAMTRLSR 270
            MLWVVV+GKRPALVIIGL+GAFFWLASMAAASVLWTI PAAQD W+L++ITGV L  FGR+ALAK YVKTEAV+N AAA AAP             R  GA G   SG    GR     GD     ++ SGLL+LNGVSSSIAAGVGWGLIHAVI+VGTALSKHMGPGAAFSPSCPHVP+VIVSALSAQAFVVLDLLLMAAAFAAAR+G+AGLM +SFGLHF AAL+TG NF+EGGC  SLPLLY VV ++AIAL R  PL+SAM RL R
Sbjct:   19 MLWVVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAAPASNAHGSSG----RYGGALGAEGSGGVGEGRGERKTGDVPDQPEESSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGAAFSPSCPHVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGDAGLMSFSFGLHFAAALTTGFNFIEGGCTASLPLLYGVVALAAIALTRYRPLKSAMIRLRR 284          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: W7TG16_9STRA (Protein binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG16_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.180e-21
Identity = 78/248 (31.45%), Postives = 117/248 (47.18%), Query Frame = 0
Query:    3 WVVVLGKRPALVIIGLIGAFFWLASMAAASVLWTIFPAAQDGWVLTIITGVGLQSFGRIALAKAYVKTEAVVNAAAADAAPXXXXXXXXXXXXRRGDGARGGGDSGXARIGRRXXXXGDESGDRQDQSGLLKLNGVSSSIAAGVGWGLIHAVILVGTAL-SKHMGPGAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYAVVV 249
            +++V+ +RP LVII + GAF +L ++  +S LW +F   +    + ++ GV  Q   R  L + Y +TE ++ +A                                                       + LN ++SS+AAG G+GL+HAV++ G+ L S +  PG  F+PSC   P V+V AL A AF ++DL  MA  F   R      M   F +H  A+  T LN VE GC +SLPL+Y V+V
Sbjct:   22 FILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSA-------------------------------------------------NHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVYVVMV 220          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: A0A0P1A6Q5_PLAHL (Gammasecretase subunit aph n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Q5_PLAHL)

HSP 1 Score: 75.9 bits (185), Expect = 1.290e-12
Identity = 46/120 (38.33%), Postives = 69/120 (57.50%), Query Frame = 0
Query:  133 LKLNGVSSSIAAGVGWGLIHAVILVGTALSKHMGP-GAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYAVVVIS 251
            L LN ++SS+A GVG+  +HA+++ G+ +    G  GAAFS SC  +P +  +ALS  A   LD+ LM  AF   R  +  ++   FG+H   ALS   N    GC +S+P+ YA  V++
Sbjct:  109 LPLNDITSSLAGGVGFSAMHALLMFGSLVGSSTGSRGAAFSSSCESIPLIFSAALSTLALTALDVALMVVAFDGYRKRSVLIITVVFGIHMGVALSALANMDTNGCYISIPVHYAGAVLA 228          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: A0A2D4BUP9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUP9_PYTIN)

HSP 1 Score: 74.3 bits (181), Expect = 4.560e-12
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 0
Query:  133 LKLNGVSSSIAAGVGWGLIHAVILVGTALSKHMGP-GAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYA 246
            L LN ++SS+A GVG+ L+H++++ G+ ++   G  GAAFS SC  +P ++  ALS  A  V+D+ LM  AF   R  NA L+     +H   ALS   N    GC VS+P+ YA
Sbjct:  109 LPLNDITSSLAGGVGFSLMHSLMMYGSVVASSTGSRGAAFSSSCESIPLILSGALSTLALTVMDVALMVIAFQGYRKMNAMLIGLVALIHLGVALSALANKSTNGCMVSIPIHYA 223          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: A0A3M6VQE8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQE8_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.630e-12
Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 0
Query:  133 LKLNGVSSSIAAGVGWGLIHAVILVGTALSKHMGP-GAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYAVVVI 250
            L LN ++SS+A GVG+ L+H++++ G+ L    G  GAA+S SC ++P +  +A+S  A  ++D+ LM  AF   R  +  L+   FG+H   ALS   N    GC +S+P+ YA  V+
Sbjct:  109 LPLNDITSSLAGGVGFALMHSLLMFGSLLGSSTGSRGAAYSTSCDNIPLIFSAAISTLALTIIDVGLMIIAFDGYRKRSVLLIGTVFGIHMGVALSALANLDTNGCFISIPVHYAGAVL 227          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: A0A484DSN2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSN2_BRELC)

HSP 1 Score: 73.9 bits (180), Expect = 6.370e-12
Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  133 LKLNGVSSSIAAGVGWGLIHAVILVGTALSKHMG-PGAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYA 246
            L LN V+SS+A GVG+ L+HA+++ G+ +    G  GAAFS SCP +P V  +ALS  A   LD+ LM  AF   R  +A ++     +H   ALS   N    GC +S+P+ YA
Sbjct:  109 LPLNDVTSSLAGGVGFSLMHALLMFGSLMGSSTGLRGAAFSNSCPAIPLVFSAALSTLALTALDVSLMVLAFDGYRKRSALIVSAVIIIHMGIALSALANMDTNGCYISIPVHYA 223          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: H3GHV0_PHYRM (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3GHV0_PHYRM)

HSP 1 Score: 72.0 bits (175), Expect = 3.120e-11
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 0
Query:  133 LKLNGVSSSIAAGVGWGLIHAVILVGTALSKHMGP-GAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYA 246
            L LN V+SS+A GVG+ ++HA+++ G+ +    G  GAAFS SC  +P V  +A+S  A   LD+ LM  AF   R  +A  +   F +H   ALS   N    GC +S+P+ YA
Sbjct:  109 LPLNDVTSSLAGGVGFSVMHALLMFGSLVGSSTGSRGAAFSASCESIPLVFSAAISTLALTALDVALMVVAFDGYRKRSAMAVGAVFVIHMGVALSALANMNTNGCYISIPVHYA 223          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: F0WMK2_9STRA (Uncharacterized protein AlNc14C158G7692 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMK2_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.720e-11
Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 0
Query:  133 LKLNGVSSSIAAGVGWGLIHAVILVGTALSKHMG-PGAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYAVVVISAI 253
            L LN  +SS+A+GVG+ L+H++++ GT L    G  GAAF   C  +P V   A+++ A  + D+ LM  AFA  R+ N  ++C    LH    LS   NF   GC +S+P+ Y   V++ +
Sbjct:  109 LPLNDFTSSLASGVGYSLMHSLMVYGTVLGSSTGFRGAAFRDYCT-LPVVFTGAITSLALSISDVALMVMAFAGYRSRNWSIICMVLVLHLGIGLSALANFKSNGCVISIPIHYGGAVLACV 229          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: A0A7S0YB71_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0YB71_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 7.930e-11
Identity = 65/194 (33.51%), Postives = 92/194 (47.42%), Query Frame = 0
Query:   10 RPALVIIGLIGAFFWLASMAAASVLWTIF-PAAQDG--WVLTIITGVGLQSFGRIALAKAYVKTEAVVNAAAADAAPXXXXXXXXXXXXRRGDGARGGGDSGXARIGRRXXXXGDESGDRQDQSGLLKLNGVSSSIAAGVGWGLIHAVILVGTAL-SKHMGPGAAFSPSCPHVPTVIVSALSAQAFVVLDLLLM 199
            +P L+I+ +  AFF+L + +AASV W I  P    G  W   I+ GV  Q   R   A +Y K E V+ A+ A +               R DG    G+   A I              Q     L LN V+  +AAGVG+G +HA++L G+ L S+    G  + PSCP VP++ VS+L+   F  LD+  M
Sbjct:   53 KPQLLIVSITAAFFYLLAASAASVCWYIVDPVIGLGGPWA-AIVPGVFFQFIFRALFAHSYFKVETVIEASIAKSEED------------REDGDENEGEDSGAGI--------------QAAKNRLALNDVACGLAAGVGFGGMHAILLFGSLLASETFDSGVLYQPSCPKVPSLTVSSLNTFCFFFLDVFWM 219          
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Match: A0A7S2UR59_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR59_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.030e-11
Identity = 80/280 (28.57%), Postives = 120/280 (42.86%), Query Frame = 0
Query:    9 KRPALVIIGLIGAFFWLASMAAASVLWTIFPAA-QDGWVLTIITGVGLQSFGRIALAKAYVKTEAVV---------NAAAADAAPXXXXXXXXXXXXRRGDGARGGGDSGXARIGRRXXXXGDESGDRQDQSGL-LKLNGVSSSIAAGVGWGLIHAVILVGTAL-SKHMGPGAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMAAAFAAARTG--NAGLMCYSFG---------------------LHFLAALSTGLNFVEGGCAVSLPLLYAVVVISAI 253
            ++  L+I+    AF +L S   +S++W   P++  D   L II  V  Q+  R      Y + E  +         +AAAA+AA                                     G+  G   + + L L+LN VS  +AAG G+G +HA++L GT L S+    G  + P C  +P+++ SAL A  F +LD++LM   F   R    N  L   +FG                      H  AA ST  N  + GC V+LPLL+ +VVI+A+
Sbjct:   28 QKAQLIIVVTTSAFAFLLSALCSSLIWLAVPSSLSDNAPLLIIPSVIFQAAFRCGFVAVYHRVEKAILTSIHNHERHAAAANAA-------------------------------------GNNDGTMNESARLRLELNDVSCGLAAGTGFGGMHAIMLYGTLLASEQRSLGTLYQPGCSFMPSLVNSALMAFLFSLLDIVLMLFTFYGMRRRLQNEELHNLNFGWGTLIGDSKEGGLTAIGITVIAHLSAAFSTVPNRADDGCLVALPLLFGIVVITAV 270          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig626.14862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA9_ECTSI4.730e-11672.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TG16_9STRA1.180e-2131.45Protein binding protein n=1 Tax=Nannochloropsis ga... [more]
A0A0P1A6Q5_PLAHL1.290e-1238.33Gammasecretase subunit aph n=1 Tax=Plasmopara hals... [more]
A0A2D4BUP9_PYTIN4.560e-1240.87Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A3M6VQE8_9STRA4.630e-1237.82Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A484DSN2_BRELC6.370e-1241.74Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
H3GHV0_PHYRM3.120e-1140.00Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
F0WMK2_9STRA5.720e-1136.89Uncharacterized protein AlNc14C158G7692 n=1 Tax=Al... [more]
A0A7S0YB71_9STRA7.930e-1133.51Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S2UR59_9STRA8.030e-1128.57Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009294Gamma-secretase subunit Aph-1PFAMPF06105Aph-1coord: 2..255
e-value: 7.2E-34
score: 117.2
IPR009294Gamma-secretase subunit Aph-1PANTHERPTHR12889GAMMA-SECRETASE SUBUNIT APH-1coord: 2..257
NoneNo IPR availablePANTHERPTHR12889:SF0GAMMA-SECRETASE SUBUNIT APH-1coord: 2..257
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..233
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 234..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..270
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 207..212
NoneNo IPR availableTMHMMTMhelixcoord: 238..260
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 45..64
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 211..233
NoneNo IPR availableTMHMMTMhelixcoord: 140..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig626contigL-elsbetiae_contig626:19632..24702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig626.14862.1mRNA_L-elsbetiae_contig626.14862.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig626 19580..25415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig626.14862.1 ID=prot_L-elsbetiae_contig626.14862.1|Name=mRNA_L-elsbetiae_contig626.14862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=271bp
MLWVVVLGKRPALVIIGLIGAFFWLASMAAASVLWTIFPAAQDGWVLTII
TGVGLQSFGRIALAKAYVKTEAVVNAAAADAAPTSDAGGSGGSGGRRGDG
ARGGGDSGGARIGRRRRGDGDESGDRQDQSGLLKLNGVSSSIAAGVGWGL
IHAVILVGTALSKHMGPGAAFSPSCPHVPTVIVSALSAQAFVVLDLLLMA
AAFAAARTGNAGLMCYSFGLHFLAALSTGLNFVEGGCAVSLPLLYAVVVI
SAIALARCGPLRSAMTRLSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009294Aph-1