prot_L-elsbetiae_contig6253.14852.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6253.14852.1
Unique Nameprot_L-elsbetiae_contig6253.14852.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length603
Homology
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 586 bits (1511), Expect = 9.450e-204
Identity = 302/465 (64.95%), Postives = 338/465 (72.69%), Query Frame = 0
Query:  144 AESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVR---------GLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLP 599
            AESEGCFT+TD+YN+RGT + G   SSKGP+Y LD SG  +  P    + VT KWLL AELY+TNGA+FYCIG+  GGDCDELRIQSTG DD+YEVRGHGGSMYF  T+VTSWDT  K PQ TY+GGRSFLNCVSEKLTGE+C+G AKN MGECRMDII+SEMG+MGFFDSESYGLTWKVR         G C+DLSN DVFETTNVYGDIK SDIHHMYYGHYSYGHQGGVWTNN+MHDNHQY            +AN                          V DGG  A GIFLHRSSDNAEVYGN I NM DAGIALLESF+ADIHDN IDGV++GIRMSLGS  N                   GSD PDV  GRP  NTF++NK+TN++GGVKFKNSD + +TNNEFTGT  +EF+DAQ TTW  N LP   C+DN++SDDGNSV  STFSSSS G+P
Sbjct:   17 AESEGCFTLTDLYNFRGTENDG---SSKGPLYMLDGSGSKITAP----TSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSSSS-GVP 461          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 536 bits (1380), Expect = 5.000e-183
Identity = 298/586 (50.85%), Postives = 353/586 (60.24%), Query Frame = 0
Query:   22 NCSNGLAGYEASGVCCPTDCGQCGGVGC----SALGGNDCCTSNILAXXXXXXXXXXXXXXXDDKGGASPTPMVXXXXXXXXXXXXXXXXSSSPTPVMTIPTSCSGPVPTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPD--VDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLP 599
             CSNG  G ++  +CC  DCG CGG  C      LG  DCC + I                 DD  G +P                                                        AE EGCFT+TD+YN+R  + S G  S+KGPI+ LDDS   V NP  +    +NKWLLTAEL++T GAVFYC G+S GGDCDELRIQSTG  DF+EVR HGGSMYFE T+VTSWDT  KTPQ TY GGRSFLNCVSEKLTGE C G A+N MGECRMDII+SE+G++G+FDSESYGLTWKVRG C+DLSN DVF+TTNVYG++ GSDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT  IA+                          V DGG  AAGIFLHRSSD A V+ N + +MQDAG+A+LES +ADI++N    V++GIR+SLGS+ N                   GSD P   V  GRP  N F++N+I N + GVK K  D   IT+N FTGT+ +EFFDAQ T W+ N LP   C+ N+ SDDG  ++ STF   + GLP
Sbjct:   11 KCSNGFVGVQSENICCHVDCGTCGGSECRRRGKGLGAADCCRNYISKNGALCSENLSAPCIMDDVTGNTPD-------------------------------------------------------AEGEGCFTITDLYNFR--LESDG--SAKGPIFNLDDSYNTVLNPKVL----SNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNE--------------VYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTFDRRTAGLP 519          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 3.880e-180
Identity = 279/458 (60.92%), Postives = 319/458 (69.65%), Query Frame = 0
Query:  114 VMTIPTSCSGPV--PTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDL 569
            +M I +SC      P+FRYAAS+G+   GRLYAE EGCFTMTD+YN+RGT + G   SSKGP+Y LDD G  ++ P    S +TN WLL AELY+T G VFYC GTSAGGDC++LRIQSTG DDF+EVRGHGGS+YFE T+VTSWDT  K PQ TY+ GRSFLNCVSEKLTG+ CEG AKN MGECRMDII+SE+ ++G+FDSESYG+TWKVRG C+DLSN +VFE TNVYGD+ GSDIHH+YYGHYSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA                           VRDGGA AAGIFLHRSSD A V+ NTITNMQDAGIA+LESFDA I+ NII+G +YGIRMSLGS  N                   GSD PDV  GRP  N    N + +   GVK K  D      N F      EF ++  T W  ND+
Sbjct:  414 LMEISSSCGDDEDRPSFRYAASSGVA--GRLYAEGEGCFTMTDLYNFRGTENDG---SSKGPVYMLDDDGTKLDIP----SGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDI 862          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 492 bits (1266), Expect = 3.890e-168
Identity = 268/423 (63.36%), Postives = 298/423 (70.45%), Query Frame = 0
Query:  177 LDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLP 599
            LDDSG  + +P    + VT KWLL +ELY+T+GA+FYCIG+  GGDCDELRIQSTG DD+YEVRGHGGSMYF  T+VTSWDT  K PQ TY+GGRSFLNCVSEKLTGE+C+G AKN  GECRMDII+SEMG+MGFFD+ESYGLTWKVRG C+DLSN DVFETTNVYGDIK S+IHHMYYG YSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA XXXXXXXXXXXX              V DGG +A GIFLHRSSDNAEVYG                                                               DAPDV  GRP  NTF++NKITNT+GGVK KNSD + I+NN+FTGT  +EFFDAQ TTW DN LP   C+DNV+SDDGNSV  STFSSSS G+P
Sbjct:    2 LDDSGNKITSP----TSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYGGXXXXXX-------------------------------------------------------XDAPDVSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPSTFSSSS-GVP 364          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 1.820e-158
Identity = 247/455 (54.29%), Postives = 299/455 (65.71%), Query Frame = 0
Query:  148 GCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLPGSC 602
            GCFT++D+Y W+G  ++G   +SKGP++ LD +  + E      +  T KWLLTA+L++T GA  YC G   GG+C ELRI+ST   DF+E+RGHGG++YFE T+VTSWD   + PQ TYK GRSF+ CVSE LTGE     A N MGECRMDIIDSEMG++G+  SE+YG+TWKVRG C DLSN DVF+  NVYGD+KGSDIHHMYYG YS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA                           V DGGA AAGIFLHRS D++EVYGNTITNM DAGIA+LE+   DIHDN +DG  +GIR+ LGS+ N                   GSD P V GGRP  N F +N I  T  GVK K SD ++ITNN F+GT  +EF +A    W  N +P   C++++   D NS    TF+ SS GLP  C
Sbjct:   10 GCFTLSDLYAWQGFYNNG---NSKGPVFVLDSNDRVDET----ATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDT--CAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDI---DNNS----TFTGSS-GLPLEC 447          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 1.480e-154
Identity = 230/344 (66.86%), Postives = 262/344 (76.16%), Query Frame = 0
Query:  152 MTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWK--------VRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARN 485
            MTD+YN+RGT   G   SSKGP+Y LDD G  ++ P    S +TN WLL AELY+T G VFYC GTSAGGDC++LRIQSTG DDF+EVRGHGGS+YFE T+VTSWDT  K PQ TY+GGRSFLNCVSEKLTG+ CEG AKN MGECRMDII+SE+ ++G+FDSESYG+TWK        VRG C+DLSN +VF+ TNVYGD+ GSDIHH+YYGHYSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT  IA+                          VRDGGA A GIFLHRSSD+A V+ NTITNMQDAGIALLE+FDA I+ N I+G +YGIRMSLGS  N
Sbjct:    1 MTDLYNFRGTEKDG---SSKGPVYMLDDDGTKLDIP----SGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENE--------------VRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNN 323          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 1.570e-110
Identity = 201/444 (45.27%), Postives = 259/444 (58.33%), Query Frame = 0
Query:  140 GRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTG--ESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVD---GGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEF-TGTAGME--FFDAQGTTWEDNDLPPTACV 575
            G+ Y    GC T+TDIY  +G  +        GP++ LD       N   +G   T  WLL  ++++  G++    G  AGGD   LRIQSTG  D+YE+RGHGGS+ F  T VTSWDT +K   T YK  RSF+ CVSE+L    ++C+G A N MGECRMDII SEMG MG+  +ESYG++WKVRG C +  N +VFE T V GDI  SDI+ MYYGHYS+GH GG+WT NKMHDN QYGFDPHDDSD L IA                           V DGG  A GIFLHRSSD+ EV+GNT+ +M+DAG+A++ES  A IHDN    V+YGIR+S+G+ARN                   G+D P+      G    NTF +N +    GGVK + ++G+  T+N F   ++G E  F D +   W +N +P   C+
Sbjct:  398 GKNYIRGGGCATLTDIYTAQGGHND------DGPLFVLDS------NDNVVGGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVE---GGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICL 826          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 1.860e-109
Identity = 215/473 (45.45%), Postives = 261/473 (55.18%), Query Frame = 0
Query:  108 SSSPTPVMTIPTSCSGPVPTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGE--SCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCR---DLS---NLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDV--DGGRPYSNTFDSNKITNTSG---GVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDN 567
            S++PTP  T  TSC         +A+T   +    Y E  GC T+T +Y  +            GP+Y LD      EN   +G   T  WLL   L + +G+     GT+A GD D LR+ ST DD F EVRG+GG+++F+ T VTSWDT     +     GRSF+NCV++        C+G +    GECRMDII S MG MG+FD+ESYGLTWKVRG C    D     N ++FE  NVYGDI  S+I+ MYYGHYSYGHQGGVW +N M DN QYGFDPHDDSD LTI+N                          V DGG  A GIFLHRSSD AEV+ N + NMQDAG+A++ES+DA+I+DN     RYGIR+SLGS RN                   GSD PDV    GRP  N FD N I  T G   GV  K  D     +N FTG +  EF D+  TTW DN
Sbjct:  167 STTPTPSAT--TSCD--------SAATVRFTDDIAYFEGGGCGTLTQMYEAQ---------EGDGPLYVLD------ENNDVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDD-FIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIE-TDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN 612          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 7.320e-107
Identity = 243/566 (42.93%), Postives = 295/566 (52.12%), Query Frame = 0
Query:   36 CCPTDCGQCGGVGCS----ALGGNDCCTSNILAXXXXXXXXXXXXXXXDDKGGASPTPMVXXXXXXXXXXXXXXXXSSSPTPVMTIPTSCSGPVPTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGE--SCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGI------------------------ALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDG--GRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDL 569
            CC   CG+CGG         L G DCCTS+I                  D  G +PTP  XXXXXXXXXXXXXXX                G + +   ++ +   S G       GC T+TD+YN +         S  GP+Y LD S  IV   G   SP T  WLLT+ L + +G   Y  GTSAGGD D LRIQST DDDF+E+RG GGS+ F +T VTSWDT K   +T Y+GGRSF+NCV++    +  SC G +    GECRMDIIDS MG MG+FD+ESYGLTWKVRGLC DLSN+++ +  NVYGDIKGS+I+ MYYG YSYGHQGGVWT+N M DN  YGFDPHDDSD LTIA                               G    GI   +  +N E+Y                                    AL+ESF A+I+DN I+  +YGIR+SLGSA N                   GSD PDV G  GR   N+FD+N I+NT   +K K  D  + TNN F      EF D+  T W +ND+
Sbjct:  323 CCSAGCGECGGXXXXXXXXGLTGADCCTSDIS--NLCSVTGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXX----------------GTIASISTSSDSSSFSGG-------GCATLTDMYNTQ---------SGSGPLYVLDSSNNIVSGGGGSASP-TGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDI 826          
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.660e-105
Identity = 250/561 (44.56%), Postives = 302/561 (53.83%), Query Frame = 0
Query:   23 CSNGLAGYEASGVCCPTD--CGQCGGVGCSALGG---NDCCTSNILAXXXXXXXXXXXXXXXDDKGGA--------SPTPMVXXXXXXXXXXXXXXXXSSSPTPVMTIPTSCSGPVPTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKG-GRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDL 569
            C+N   GY   G+    +  CG CGG GCS   G   +DCC   I                 D    A        SPTP  XXXXXX          S++PTP   +P+ C           +T  + K   Y +S GC T+TD+YN +            GP++ LD +   V+  G    P T +WLLT+ + + + A  +  G   GGDCD LRI+STG   ++E+ GHGG+MYFE T VTSWDTSK   +   K  GRSF+ C+++     SC G +   MG CRMDIIDS MG MG+  SESYGLTWKVRGLC++LSNL +F+  NVYGDIK SDI+ MYYG YSYGH+GGVWTNNKMHDN QYGFDPHDDSD L IA+  XXXXXXXXXXXXXXXXXXXXXXXX                                   A LESFDADI+DN I   +YGIR+SLGS  N                   GSD+PDV  GRP  N F+ N ++NT  GV  K  D     NN FT     EF  ++ T W  N L
Sbjct:  128 CANECKGYAFFGLQWGREAGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXR---------SATPTPPTPVPSGCD--------TKATVQIDKDTAYFKSGGCATLTDLYNAQ---------DGTGPLWVLDSNDNKVDGAGGSAKP-TGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLVIAHNVXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDVSNGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSL 658          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGU8_9PHAE9.450e-20464.95MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LRM4_ECTSI5.000e-18350.85Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI3.880e-18060.92Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FIU4_ECTSI3.890e-16863.36Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI1.820e-15854.29Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE1.480e-15466.86MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JNF5_9PHAE1.570e-11045.27MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G8D9_ECTSI1.860e-10945.45Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FWE8_ECTSI7.320e-10742.93Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRN0_ECTSI1.660e-10544.56Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 459..480
e-value: 260.0
score: 10.4
coord: 538..588
e-value: 610.0
score: 8.7
coord: 516..537
e-value: 840.0
score: 7.8
coord: 340..370
e-value: 8100.0
score: 0.7
coord: 410..434
e-value: 14.0
score: 14.6
coord: 436..458
e-value: 21.0
score: 14.1
coord: 482..504
e-value: 290.0
score: 10.2
coord: 386..408
e-value: 5.9
score: 15.9
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 405..507
e-value: 9.9E-14
score: 51.5
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 151..513
e-value: 6.5E-87
score: 294.0
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 389..592
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 389..592
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..602
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.942
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 331..572

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6253contigL-elsbetiae_contig6253:5467..8958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6253.14852.1mRNA_L-elsbetiae_contig6253.14852.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6253 5193..10209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6253.14852.1 ID=prot_L-elsbetiae_contig6253.14852.1|Name=mRNA_L-elsbetiae_contig6253.14852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=603bp
MKFSVVLLLALLLPIVVTQAQNCSNGLAGYEASGVCCPTDCGQCGGVGCS
ALGGNDCCTSNILAGNVVCSKSGVAPCIIDDKGGASPTPMVPTPTPPTPN
PPTPSTPSSSPTPVMTIPTSCSGPVPTFRYAASTGLVSKGRLYAESEGCF
TMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLL
TAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEK
TLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMD
IIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDI
HHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNV
NHGIIASKRCNHVKIYNNEVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQ
DAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNEVYSNTFNDCSDYGL
YTYEGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTG
TAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLPG
SC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence