prot_L-elsbetiae_contig6250.14849.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6250.14849.1
Unique Nameprot_L-elsbetiae_contig6250.14849.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: D7FJT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT2_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 6.340e-69
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVKA 116
            MVIKTEVCAFSDTRIYPGHGVR IRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVKA
Sbjct:    1 MVIKTEVCAFSDTRIYPGHGVRFIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVKA 116          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: A0A024TG11_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024TG11_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.620e-46
Identity = 77/115 (66.96%), Postives = 98/115 (85.22%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVK 115
            MVIKTE CAFS++RIYPGHGVR++R+DG   TL ++KCKSL  QRKKPAK+ WT  WRR+NKK++VEE +RRR RKTTK+ RAIVG S++E+KKKR+QKP++R+A R+AA KE K
Sbjct:    1 MVIKTETCAFSESRIYPGHGVRLVRKDGNAYTLLNSKCKSLFLQRKKPAKIHWTLGWRRMNKKLRVEETSRRRARKTTKIQRAIVGVSVDELKKKRNQKPQLRAAARDAALKEAK 115          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: A0A6G0WHE0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHE0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 7.950e-46
Identity = 78/115 (67.83%), Postives = 96/115 (83.48%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVK 115
            MVIKTE CAFS++RIYPGHG R++R+DG    L ++KCKSL  QRKKPAK+ WT  WRR+NKK++VEEV RRR RKTTK+ RAIVG S++E+KKKR+QKP+VR+A REAA KE K
Sbjct:    1 MVIKTETCAFSESRIYPGHGSRLVRKDGNAYMLLNSKCKSLFLQRKKPAKIHWTLGWRRMNKKLRVEEVARRRARKTTKIQRAIVGVSVDELKKKRNQKPQVRAAAREAALKEAK 115          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: A0A836CJ11_9STRA (Ribosomal protein L24e-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ11_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.100e-44
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQ 106
            MVIKT+VCAFS+ RIYPGHG+R IR+DG P+   +AKCKSLL QRKKPAKLTWTQ+WRRLNKKIKVEEVTRRR R+TTK  RAIVGASL+EIK KR+  P+   AQ
Sbjct:    1 MVIKTDVCAFSEFRIYPGHGMRFIRKDGTPVVFINAKCKSLLMQRKKPAKLTWTQSWRRLNKKIKVEEVTRRRNRRTTKFQRAIVGASLDEIKAKRAAVPKKTPAQ 106          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: T0Q6K9_SAPDV (50S ribosomal protein L24e n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q6K9_SAPDV)

HSP 1 Score: 151 bits (382), Expect = 3.490e-44
Identity = 75/112 (66.96%), Postives = 94/112 (83.93%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAK 112
            MVIKT+ CAFS++RIYPGHG R+IR+DG    L ++KCKSL  QRKKPAK+ WT  WRR+NKK++VEEV+RRR RKTTK+ RAIVG S+E++KKKR+QKP VR+A R+AA K
Sbjct:    1 MVIKTDTCAFSESRIYPGHGTRLIRKDGNAFMLLNSKCKSLFLQRKKPAKIVWTLGWRRMNKKLRVEEVSRRRARKTTKIQRAIVGVSVEDLKKKRNQKPAVRAAARDAALK 112          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: W7TW72_9STRA (60s ribosomal protein l24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW72_9STRA)

HSP 1 Score: 150 bits (380), Expect = 7.940e-44
Identity = 80/117 (68.38%), Postives = 96/117 (82.05%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVKAR 117
            MVIKT++C+FS+ R+YPGHG+R +RRD   +   +AK K L  QRKK A+L WTQ WRRL+KKIKVEE+ +RRTR+TTK  RAIVGASLEEIKKKR+QKPE R+AQREAA KEVK R
Sbjct:    1 MVIKTDMCSFSEYRVYPGHGIRFVRRDSATLVFSTAKTKGLYNQRKKAARLVWTQGWRRLHKKIKVEEIQKRRTRRTTKFQRAIVGASLEEIKKKRAQKPE-RNAQREAALKEVKER 116          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: A0A8K1FKL7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKL7_PYTOL)

HSP 1 Score: 150 bits (379), Expect = 1.030e-43
Identity = 79/117 (67.52%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVKAR 117
            MVIKTE C+FS+ RIYPGHG R IRRDG   T  +AK KSL  QRKKP K+ WT  WRR+NKKIKVEE+ RRRTRKT K+ RAIVG S ++I+KKR+QKP+VR+A REAA KE K R
Sbjct:    1 MVIKTETCSFSEGRIYPGHGSRYIRRDGTVYTFLNAKSKSLFMQRKKPTKIVWTLGWRRMNKKIKVEEIARRRTRKTAKVQRAIVGVSADDIRKKRNQKPQVRAAAREAALKEAKDR 117          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: A0A2D4BH65_PYTIN (60S ribosomal protein L24, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH65_PYTIN)

HSP 1 Score: 147 bits (372), Expect = 1.180e-42
Identity = 77/117 (65.81%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVKAR 117
            MVIKTE C+FS+ RIYPGHG R +RRDG   T  ++K KSL  QRKKP K+ WT  WRR+NKKIKVEEV RRRTRKT K+ RAI+G S ++I+KKR+QKP+VR+A REAA KE K R
Sbjct:    1 MVIKTETCSFSEGRIYPGHGSRYVRRDGTVYTFINSKSKSLFLQRKKPTKIVWTLGWRRMNKKIKVEEVARRRTRKTAKVQRAILGVSADDIRKKRNQKPQVRAAAREAALKEAKDR 117          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: A0A1V9ZEL2_9STRA (60S ribosomal protein L24 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEL2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.390e-42
Identity = 83/146 (56.85%), Postives = 103/146 (70.55%), Query Frame = 0
Query:    4 KTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQREAAAKEVKAR-KXXXXXXXXXXXXXXXKPTASKQKGGNTTCV 148
            KTE CAFS++RIYPGHG R+IR+DG    L ++KCKSL  QRKKPAK+ WT  WRR+NKK++VEEVTRRR RKTTK+ RAIVG S++E+KKKR+QKP VR+A R+AA KE K R K                P  + +KGGN   +
Sbjct:  280 KTETCAFSESRIYPGHGTRLIRKDGTTHILLNSKCKSLFLQRKKPAKIVWTLGWRRMNKKLRVEEVTRRRARKTTKIQRAIVGVSVDELKKKRNQKPAVRAAARDAALKEAKDRSKAKKHDKTPVNKAIKNAPKGNLKKGGNRGAI 425          
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Match: A0A6V1N3D6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N3D6_HETAK)

HSP 1 Score: 146 bits (369), Expect = 3.480e-42
Identity = 77/106 (72.64%), Postives = 85/106 (80.19%), Query Frame = 0
Query:    1 MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAKLTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKPEVRSAQ 106
            MVIKTE+CAFS+ RIYPGHG + +RRDGQP+ L S+K KSLL QRKKPAKLTWT  WRRLNKKIKVEE  RRRTR+  K  RAIVGASL+EIKKKR  KP    AQ
Sbjct:    1 MVIKTELCAFSEFRIYPGHGQKFVRRDGQPVMLISSKTKSLLLQRKKPAKLTWTVGWRRLNKKIKVEESARRRTRRAAKFQRAIVGASLDEIKKKRQAKPAASKAQ 106          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6250.14849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJT2_ECTSI6.340e-6999.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024TG11_9STRA2.620e-4666.96Uncharacterized protein n=8 Tax=Aphanomyces TaxID=... [more]
A0A6G0WHE0_9STRA7.950e-4667.83Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A836CJ11_9STRA1.100e-4474.53Ribosomal protein L24e-domain-containing protein n... [more]
T0Q6K9_SAPDV3.490e-4466.9650S ribosomal protein L24e n=2 Tax=Saprolegnia Tax... [more]
W7TW72_9STRA7.940e-4468.3860s ribosomal protein l24 n=2 Tax=Monodopsidaceae ... [more]
A0A8K1FKL7_PYTOL1.030e-4367.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BH65_PYTIN1.180e-4265.8160S ribosomal protein L24, putative n=1 Tax=Pythiu... [more]
A0A1V9ZEL2_9STRA3.390e-4256.8560S ribosomal protein L24 (Fragment) n=1 Tax=Thrau... [more]
A0A6V1N3D6_HETAK3.480e-4272.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..122
NoneNo IPR availableGENE3D3.30.160.440coord: 69..100
e-value: 5.5E-11
score: 44.1
NoneNo IPR availablePANTHERPTHR10792:SF1RIBOSOMAL PROTEIN L24coord: 4..141
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 6..58
IPR000988Ribosomal protein L24e-relatedPFAMPF01246Ribosomal_L24ecoord: 4..67
e-value: 4.5E-26
score: 90.8
IPR000988Ribosomal protein L24e-relatedPANTHERPTHR1079260S RIBOSOMAL PROTEIN L24coord: 4..141
IPR038630Ribosomal protein L24e/L24 superfamilyGENE3D2.30.170.20coord: 1..64
e-value: 1.1E-27
score: 97.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6250contigL-elsbetiae_contig6250:5175..8869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6250.14849.1mRNA_L-elsbetiae_contig6250.14849.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6250 5175..8881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6250.14849.1 ID=prot_L-elsbetiae_contig6250.14849.1|Name=mRNA_L-elsbetiae_contig6250.14849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MVIKTEVCAFSDTRIYPGHGVRMIRRDGQPITLFSAKCKSLLKQRKKPAK
LTWTQAWRRLNKKIKVEEVTRRRTRKTTKLNRAIVGASLEEIKKKRSQKP
EVRSAQREAAAKEVKARKAANKAAKGSSAAMKAKPTASKQKGGNTTCVGR
VVFFSHF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000988Ribosomal_L24e-rel
IPR038630L24e/L24_sf