prot_L-elsbetiae_contig6239.14835.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6239.14835.1
Unique Nameprot_L-elsbetiae_contig6239.14835.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length388
Homology
BLAST of mRNA_L-elsbetiae_contig6239.14835.1 vs. uniprot
Match: A0A6H5L7U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U5_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.900e-18
Identity = 114/410 (27.80%), Postives = 158/410 (38.54%), Query Frame = 0
Query:    1 MRIFQALMIAALAVIRVDATDCDTH--APALCGNDAELENNNGDCIGASSCTQLECCVCSLGFTDTGNAPPNLECV---ADPTCATFTYEVNGNSECVDDRVPPATTADITCTGGTCTEPLXXXXXXXXXXXXDDGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDPTCA---TFAYDIDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAPMCDTHGCP-GGITAITDAAITPCTGTNFACTDGQCCQMDENSGSGDGAEGDGSADDICVAEQNACTGSDACRTC---REGALGDAGCPDTANATTCSGLAAHYCCFVEAMSG---CSDNALLVALVNCQEEEDGIADCTLTDFCDHQDD--------TSGAPNLLACSTLGTAIFAGAAAAAAGVGMTA 387
            M+IF+ALM+AA+AV++V+A  C  +  +P                  A++CT+ +CC+C  G+ D+  A  N+ C     D  C +    V    +  D        A   CT GTCT+                                XXXXXXXXXX        ++D T A   T  Y+ D                                +  MC +H C       I DAA T C  TN  CTD QCC+ D+  G  D          +C  E+ AC  + AC  C    +  + D  C   +   TC   A  YCC+   + G   C  N+L++A  NC  EE+ +  CTL D CD            TSG  +  + S+ G A+F   A    G   TA
Sbjct:    1 MKIFEALMLAAVAVLQVNADTCSDNWASPXXXXXXXXXXXXXXXTGTANACTEDDCCLCPDGYIDSDTATANVTCAIEEVDTMCLSHNCTVTNEVQIQD-------AATTLCTNGTCTD---------------------------EQCCEXXXXXXXXXXGENQDCTTQNDNTAACTCTDGYNDDNEDGVCDL------------------------NDTMCLSHNCTVTNEVQIQDAATTLC--TNGTCTDEQCCEADDGGGDVD----------VCSTEKAACEANTACAACITAGDAYMEDGSCVVESEPETCQDFADMYCCYAGGVDGEDECRTNSLILAYTNCLIEENEVESCTLIDLCDTSATVAPTPAPVTSGTSSFFSRSSPGAAVFGAVATGIVGFLFTA 340          
BLAST of mRNA_L-elsbetiae_contig6239.14835.1 vs. uniprot
Match: A0A6H5JE55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE55_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 7.710e-9
Identity = 39/96 (40.62%), Postives = 50/96 (52.08%), Query Frame = 0
Query:  255 GSGDGAEGDGSADDICVAEQNACTGSDACRTCREGALGDAGCPDTANATTCSGLAAHYCCFVEAMSGCSDNALLVALVNCQEEEDGIADCTLTDFC 350
            G G    GD     +C+ +Q  C    AC  C  GA  D  C  T     C+G+A +YCC    + GCSDNALL+ L+NC+ E D    CTLT+ C
Sbjct:  310 GEGRXXXGDDGGGAMCLTQQAICVADSACAACMAGATRDGSCDATV--PDCAGVADYYCCLAGDVRGCSDNALLLDLINCEIELDS---CTLTELC 400          
BLAST of mRNA_L-elsbetiae_contig6239.14835.1 vs. uniprot
Match: D8LMC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC9_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.320e-7
Identity = 34/82 (41.46%), Postives = 44/82 (53.66%), Query Frame = 0
Query:  269 ICVAEQNACTGSDACRTCREGALGDAGCPDTANATTCSGLAAHYCCFVEAMSGCSDNALLVALVNCQEEEDGIADCTLTDFC 350
            +C+ +Q  C     C  C  GA  D  C  T     C+G+A +YCC    + GCSDN LL+ L+NC+ E D    CTLTD C
Sbjct:   89 MCLTQQAICMADLDCAACMAGATRDGSCDATL--PDCAGVADYYCCLAGDVRGCSDNVLLLDLINCEIELDS---CTLTDLC 165          
BLAST of mRNA_L-elsbetiae_contig6239.14835.1 vs. uniprot
Match: D8LMC6_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC6_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.150e-6
Identity = 49/142 (34.51%), Postives = 62/142 (43.66%), Query Frame = 0
Query:  261 EGDGSAD-DICVAEQNACTGSDACRTCR---EGALGDAGCPDTANATTCSGLAAHYCCFVEAMSG---CSDNALLVALVNCQEEEDGIADCTLTDFCDHQDD--------TSGAPNLLACSTLGTAIFAGAAAAAAGVGMTA 387
            E DG  D DIC  E  AC  + AC  C    +  + D  C   +   TC   A  YCC+     G   C  N+L++A  NC  EE  +  CTL D CD            TSG  +  + S+ GTA+F   A   AG   TA
Sbjct:  258 EMDGDDDEDICPTEMAACEANTACAACMTAGDAYMEDETCVVESELETCQDYADMYCCYAGGEDGEDECRTNSLMLAYTNCMVEEYEVESCTLIDLCDASATVAPTPAPVTSGTSSFFSRSSPGTAVFGAVATGIAGFLFTA 399          
BLAST of mRNA_L-elsbetiae_contig6239.14835.1 vs. uniprot
Match: D8LMC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC7_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 9.800e-5
Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    1 MRIFQALMIAALAVIRVDATDCDTHAPALCGND--AELENNNGDCIGASSCTQLECCVCSLGFTDTGNAPPNLECVADPTCAT 81
            M+  Q LM++ALAV+RVDA+DC+    A CG+D  A     + DC  A +C   ECC C  G+TD  ++   L C A   CAT
Sbjct:    1 MKFIQILMVSALAVLRVDASDCENDFAAGCGDDLAALATPADIDCA-ADACLSTECCECPSGYTDATDSDA-LSCDA---CAT 78          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6239.14835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L7U5_9PHAE1.900e-1827.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JE55_9PHAE7.710e-940.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMC9_ECTSI4.320e-741.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMC6_ECTSI2.150e-634.51EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
D8LMC7_ECTSI9.800e-543.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.837

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6239contigL-elsbetiae_contig6239:2458..7430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6239.14835.1mRNA_L-elsbetiae_contig6239.14835.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6239 2420..8414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6239.14835.1 ID=prot_L-elsbetiae_contig6239.14835.1|Name=mRNA_L-elsbetiae_contig6239.14835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=388bp
MRIFQALMIAALAVIRVDATDCDTHAPALCGNDAELENNNGDCIGASSCT
QLECCVCSLGFTDTGNAPPNLECVADPTCATFTYEVNGNSECVDDRVPPA
TTADITCTGGTCTEPLCCVDPTCATFTYDDGSGGSVCLTGREQPTTPADY
TCTSGSCTEALCCVESDPTCATFAYDIDGNSECLTNRVQPTTPAEVTCTG
GTCTEPLCCVDAPMCDTHGCPGGITAITDAAITPCTGTNFACTDGQCCQM
DENSGSGDGAEGDGSADDICVAEQNACTGSDACRTCREGALGDAGCPDTA
NATTCSGLAAHYCCFVEAMSGCSDNALLVALVNCQEEEDGIADCTLTDFC
DHQDDTSGAPNLLACSTLGTAIFAGAAAAAAGVGMTA*
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