prot_L-elsbetiae_contig6229.14821.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6229.14821.1
Unique Nameprot_L-elsbetiae_contig6229.14821.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length99
Homology
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BLAST of mRNA_L-elsbetiae_contig6229.14821.1 vs. uniprot
Match: D7G2C6_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C6_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.870e-9
Identity = 30/40 (75.00%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:   60 EEYDPVRGLESVWKGLIGSGQETKVNGRVDNGRPFYVRVR 99
            EEYD + G  SVWKGL+GSGQE KV G VDN RPFYVRVR
Sbjct: 3438 EEYDTIHGFHSVWKGLVGSGQEAKV-GCVDNDRPFYVRVR 3476
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6229.14821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2C6_ECTSI1.870e-975.00C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6229contigL-elsbetiae_contig6229:476..1284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6229.14821.1mRNA_L-elsbetiae_contig6229.14821.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6229 475..1284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6229.14821.1 ID=prot_L-elsbetiae_contig6229.14821.1|Name=mRNA_L-elsbetiae_contig6229.14821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
GGGGGGGAGNRTRSWSGVDAGGGSEADGARGPLGSESAARRLRGGPSQGS
QLQEEEDESEEYDPVRGLESVWKGLIGSGQETKVNGRVDNGRPFYVRVR
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