prot_L-elsbetiae_contig6220.14813.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6220.14813.1
Unique Name	prot_L-elsbetiae_contig6220.14813.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	157

Homology

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BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: UPI001423C659 (sugar phosphate isomerase/epimerase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001423C659)

HSP 1 Score: 318 bits (814), Expect = 3.740e-108
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0

Query:    5 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 156
            +GLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAM EATGFRGLNEVEIFS+ENWWKRDADEVLTEVVARGRDCC
Sbjct:  121 EGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMVEATGFRGLNEVEIFSSENWWKRDADEVLTEVVARGRDCC 272

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BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: UPI001F23EEB2 (sugar phosphate isomerase/epimerase n=1 Tax=Sinorhizobium medicae TaxID=110321 RepID=UPI001F23EEB2)

HSP 1 Score: 260 bits (665), Expect = 7.280e-86
Identity = 117/152 (76.97%), Postives = 132/152 (86.84%), Query Frame = 0

Query:    5 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 156
            +GLA+TLDYAR +DMPIAIEPLHPMYAADRACVNTL QALD+CD+LG GIGVA+DVYHVWWDPDL  Q++RAGK+R+L FHICDWLVPTRD+LTDRGMMGDGV+DL G+RA  EA GF GLNEVEIFS  NWW RDADEV+  +  RGR  C
Sbjct:   95 EGLAQTLDYARSVDMPIAIEPLHPMYAADRACVNTLRQALDICDELGTGIGVAVDVYHVWWDPDLLPQLRRAGKERILAFHICDWLVPTRDLLTDRGMMGDGVVDLRGLRAAVEAQGFTGLNEVEIFSEHNWWTRDADEVMRTIADRGRAFC 246

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BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A2Z2NTE2_9GAMM (AP_endonuc_2 domain-containing protein n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2NTE2_9GAMM)

HSP 1 Score: 261 bits (667), Expect = 8.490e-86
Identity = 117/155 (75.48%), Postives = 133/155 (85.81%), Query Frame = 0

Query:    1 DDAHQGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDC 155
            D   QGL+KTLDYAR ++MPIAIEPLHPMYAADRACVNT +QALD+CD LG GIGVALDVYH+WWDPD+  Q+ RAGK+RLL FH+CDWLVPT DML+DRGMMGDGVID+P  R++ EA GF GLNEVEIFSAENWWKRD DEVL E++ R R C
Sbjct:  118 DIVTQGLSKTLDYARTVNMPIAIEPLHPMYAADRACVNTTAQALDICDQLGTGIGVALDVYHIWWDPDIQTQIARAGKERLLAFHLCDWLVPTTDMLSDRGMMGDGVIDIPHYRSLVEAQGFDGLNEVEIFSAENWWKRDPDEVLQEIINRARQC 272

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BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A1V0GYI7_9RHOB (Endonuclease n=4 Tax=Paracoccus TaxID=265 RepID=A0A1V0GYI7_9RHOB)

HSP 1 Score: 261 bits (668), Expect = 1.040e-85
Identity = 118/152 (77.63%), Postives = 132/152 (86.84%), Query Frame = 0

Query:    5 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 156
            +GLAKTLDYAR +DMPIAIEPLHPMYAADRACVNTL QALD+CD LG+GIG A+DVYHVWWDPDL  Q++RAG++R+L FHICDWLVPTRD+LTDRGMMGDGVIDL G+RA  EA  F GLNEVEIFS  NWWKRD DEVL  ++ RGR CC
Sbjct:  138 EGLAKTLDYARTVDMPIAIEPLHPMYAADRACVNTLGQALDICDQLGSGIGAAVDVYHVWWDPDLLPQLRRAGQERILAFHICDWLVPTRDLLTDRGMMGDGVIDLRGLRAAVEAESFTGLNEVEIFSELNWWKRDPDEVLQTLIERGRTCC 289

[Close]

BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A2N5XN97_9HYPH (Endonuclease n=1 Tax=Cohaesibacter celericrescens TaxID=2067669 RepID=A0A2N5XN97_9HYPH)

HSP 1 Score: 260 bits (664), Expect = 2.420e-85
Identity = 118/151 (78.15%), Postives = 130/151 (86.09%), Query Frame = 0

Query:    5 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDC 155
            +GLAKTLDYAR   MP+AIEPLHPMYAADRAC+NTL QALD+CD+LG GIGVA DVYH+WWDP+LA Q+KRAGK RLL +HICDWLVPT DMLTDRGMMGDGVID+  IR M EA GF GLNEVEIFSA NWWKRDADEV+  +V R RDC
Sbjct:  122 EGLAKTLDYARSQKMPVAIEPLHPMYAADRACINTLRQALDVCDELGDGIGVAADVYHIWWDPELADQIKRAGKSRLLAYHICDWLVPTSDMLTDRGMMGDGVIDIAAIRKMVEAEGFCGLNEVEIFSANNWWKRDADEVMRTIVDRARDC 272

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BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A1H9WLK2_9RHOB (Sugar phosphate isomerase/epimerase n=1 Tax=Tranquillimonas rosea TaxID=641238 RepID=A0A1H9WLK2_9RHOB)

HSP 1 Score: 260 bits (664), Expect = 2.670e-85
Identity = 116/156 (74.36%), Postives = 134/156 (85.90%), Query Frame = 0

Query:    1 DDAHQGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 156
            +   +GLA+TLD+ARG  + +AIEPLHPMYAADRACVNT+  ALD+CD LG GIGVA+DVYHVWWDP+L+ Q++RAG+DRL+ FH+CDWLVPTRD+LTDRGMMGDGVIDLPG+R   EA GF GLNEVEIFSAENWWKRDADEVL  VV RGR  C
Sbjct:  120 ETVEEGLARTLDHARGAGVKVAIEPLHPMYAADRACVNTMGHALDICDRLGEGIGVAVDVYHVWWDPNLSRQIERAGRDRLMAFHLCDWLVPTRDLLTDRGMMGDGVIDLPGLRRQVEAHGFDGLNEVEIFSAENWWKRDADEVLATVVERGRTAC 275

[Close]

BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A848TZP1_9GAMM (Sugar phosphate isomerase/epimerase n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848TZP1_9GAMM)

HSP 1 Score: 258 bits (658), Expect = 1.910e-84
Identity = 115/151 (76.16%), Postives = 132/151 (87.42%), Query Frame = 0

Query:    5 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDC 155
            +GLA+TL+YAR LDMPIAIEPLHPMYAADRACVNT +QALDLCD LG GIGVALD+YH+WWDPD+ AQ++RAGK RLL FH+CDWLVPT DML+DRGMMGDG+ID+   RAM E +GF GLNEVEIFSAENWWKRD D+VL+E+V R   C
Sbjct:  121 EGLARTLEYARKLDMPIAIEPLHPMYAADRACVNTTAQALDLCDQLGEGIGVALDLYHIWWDPDIRAQIQRAGKARLLAFHLCDWLVPTTDMLSDRGMMGDGIIDIASYRAMVEDSGFDGLNEVEIFSAENWWKRDPDDVLSEIVRRAEQC 271

[Close]

BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: UPI0018EB8A4C (sugar phosphate isomerase/epimerase n=1 Tax=Rhizobium sp. ASV20 TaxID=2795126 RepID=UPI0018EB8A4C)

HSP 1 Score: 255 bits (652), Expect = 1.610e-83
Identity = 112/152 (73.68%), Postives = 131/152 (86.18%), Query Frame = 0

Query:    5 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 156
            +GLA+TLDYAR +DM +AIEPLHPMYAADRACVNT+ QALD+CD LG GIGVA+DVYHVWWDP L  Q+KRAGK+R+L FH+CDWL+PTRD+LTDRGMMGDGVIDL G+R   EA GF GLNEVEIFS +NWW+RDAD+V+  +  RGR CC
Sbjct:  121 EGLARTLDYARTVDMAVAIEPLHPMYAADRACVNTVKQALDICDQLGTGIGVAIDVYHVWWDPALLPQLKRAGKERILAFHLCDWLLPTRDLLTDRGMMGDGVIDLRGLRVAVEAEGFDGLNEVEIFSEQNWWRRDADDVMRVIADRGRSCC 272

[Close]

BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A2A5G7D4_9HYPH (Endonuclease n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2A5G7D4_9HYPH)

HSP 1 Score: 254 bits (648), Expect = 6.970e-83
Identity = 114/150 (76.00%), Postives = 128/150 (85.33%), Query Frame = 0

Query:    6 GLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDC 155
            GLAKTL+YAR +DM IAIEPLHPMYAADRACVNTL QALD+CD LG  IG A+DVYHVWWDPD+  Q+KRAGKDRLL FHICDWLVPT+DMLTDRGMMGDG ID+  +RA  EA GF GLNEVEIFSA+NWWK+D D+VL  ++ RGR C
Sbjct:  125 GLAKTLEYARTVDMKIAIEPLHPMYAADRACVNTLGQALDICDQLGDXIGAAVDVYHVWWDPDILPQIKRAGKDRLLAFHICDWLVPTQDMLTDRGMMGDGAIDIXALRAAVEAEGFNGLNEVEIFSAQNWWKQDPDQVLXTIIERGRGC 274

[Close]

BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A2T0RKX8_9RHOB (Sugar phosphate isomerase/epimerase n=1 Tax=Aliiruegeria haliotis TaxID=1280846 RepID=A0A2T0RKX8_9RHOB)

HSP 1 Score: 251 bits (642), Expect = 5.500e-82
Identity = 111/152 (73.03%), Postives = 128/152 (84.21%), Query Frame = 0

Query:    5 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 156
            +GLA TL+YARG+ +P+AIEPLHP YA DRACVNT SQALD+CD LG GIGVALDVYH+WWDP++  Q+ RAGK+RLL FHICDWLVPT+D+L DRGMMGDGV D+P +RA  EA GF GLNEVEIFSAE WWKRD D+VL  +VARG  CC
Sbjct:  122 EGLAATLEYARGVGVPVAIEPLHPAYAGDRACVNTTSQALDICDRLGDGIGVALDVYHIWWDPEIRRQIARAGKERLLAFHICDWLVPTQDILEDRGMMGDGVADIPALRAEVEAAGFTGLNEVEIFSAETWWKRDPDDVLKTIVARGESCC 273

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001423C659	3.740e-108	98.03	sugar phosphate isomerase/epimerase n=1 Tax=Pelagi...	[more]
UPI001F23EEB2	7.280e-86	76.97	sugar phosphate isomerase/epimerase n=1 Tax=Sinorh...	[more]
A0A2Z2NTE2_9GAMM	8.490e-86	75.48	AP_endonuc_2 domain-containing protein n=1 Tax=Gra...	[more]
A0A1V0GYI7_9RHOB	1.040e-85	77.63	Endonuclease n=4 Tax=Paracoccus TaxID=265 RepID=A0...	[more]
A0A2N5XN97_9HYPH	2.420e-85	78.15	Endonuclease n=1 Tax=Cohaesibacter celericrescens ...	[more]
A0A1H9WLK2_9RHOB	2.670e-85	74.36	Sugar phosphate isomerase/epimerase n=1 Tax=Tranqu...	[more]
A0A848TZP1_9GAMM	1.910e-84	76.16	Sugar phosphate isomerase/epimerase n=1 Tax=Granul...	[more]
UPI0018EB8A4C	1.610e-83	73.68	sugar phosphate isomerase/epimerase n=1 Tax=Rhizob...	[more]
A0A2A5G7D4_9HYPH	6.970e-83	76.00	Endonuclease n=1 Tax=Hyphomicrobiales bacterium Ta...	[more]
A0A2T0RKX8_9RHOB	5.500e-82	73.03	Sugar phosphate isomerase/epimerase n=1 Tax=Aliiru...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013022	Xylose isomerase-like, TIM barrel domain	PFAM	PF01261	AP_endonuc_2	coord: 5..108 e-value: 6.7E-14 score: 51.8
None	No IPR available	GENE3D	3.20.20.150		coord: 1..156 e-value: 6.2E-42 score: 145.4
None	No IPR available	PANTHER	PTHR12110:SF27		coord: 6..150
None	No IPR available	PANTHER	PTHR12110	HYDROXYPYRUVATE ISOMERASE	coord: 6..150
IPR036237	Xylose isomerase-like superfamily	SUPERFAMILY	51658	Xylose isomerase-like	coord: 4..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6220	contig	L-elsbetiae_contig6220:759..1229 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6220.14813.1	mRNA_L-elsbetiae_contig6220.14813.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6220 759..1229 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6220.14813.1 ID=prot_L-elsbetiae_contig6220.14813.1|Name=mRNA_L-elsbetiae_contig6220.14813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=157bp
DDAHQGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDL
GAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDR
GMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVA
RGRDCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013022	Xyl_isomerase-like_TIM-brl
IPR036237	Xyl_isomerase-like_sf