prot_L-elsbetiae_contig6218.14808.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6218.14808.1
Unique Nameprot_L-elsbetiae_contig6218.14808.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length574
Homology
BLAST of mRNA_L-elsbetiae_contig6218.14808.1 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 7.110e-131
Identity = 234/392 (59.69%), Postives = 273/392 (69.64%), Query Frame = 0
Query:  141 VTFALALDKCTSTVSTLRSLVPRRFPSTTSVSTRDDDSATLI-------PGLEPYIRTSITDRVHDGIYDTDIAHKSTVSGRVKRGEIRSPSICRHGTRFGETPPGPGRQQFKGPAHYDTSTGFDAISRSSTSLSFPRDKCKYDSYIRRGLGQTTGSTIGPGHYGWETAATAAPGQLAFSAIERWSPQPTSKTVANQGPWDDVKDAWGRGGYIESAVPRECKSYLPREVLWYMNHLELDHFDKESFTTAMRRDPKRYAACFSKTEEPDWRVIGDPALGPGTYAIERAEALTFPAPLGGAGDADPSRPSLPFRMRYTPFDTQQLADGYKTLRPRFSTPRSFLYASELSGGIREAAVGLTGARLSAATLAEKTAGGLIEPTSDARRKRLSPAAK 525
            +T   A+D+C STVST+RSLVPRRF ST + S  D DS+TL         GLEP+IRTSITDR+HDGIY+TDI HKST+ GRVKRGEIR P + R+G RF +   G  RQ+  GP +YDTS G DA S++S  L  PR                  S IGPG Y      +    +L FS   RW+ +P+S    NQGPWDDV+DAWGRGGYIE AVPRECKSYLP+E+L YM  LELDHF KESF TAMRR PKRYAA FS T+EPDWRV G+P LGPGTYAIE AE+LT PAP GGAGDADP+RPS+PFR+R TPFDT++LADGYKTL+PRFSTPR+ LY SEL  G   A V        A T++E+ AGG I P +  R KRLSPAAK
Sbjct:    1 MTATTAVDECPSTVSTIRSLVPRRFHSTEAFS--DGDSSTLTGGPRSAYAGLEPFIRTSITDRIHDGIYETDIGHKSTLGGRVKRGEIRCPKLSRYGKRFADDAAGLERQELMGPGYYDTSPGIDATSKASMILPLPR------------------SAIGPGQYEARPVTSTGSARLEFSTTVRWTKEPSSGASPNQGPWDDVEDAWGRGGYIERAVPRECKSYLPQEILRYMTRLELDHFGKESFATAMRRHPKRYAASFSNTQEPDWRVNGNPNLGPGTYAIELAESLTLPAPQGGAGDADPARPSIPFRVRRTPFDTRRLADGYKTLKPRFSTPRTALYLSELPRGT--AGVVSDPPDPPATTMSERKAGGTIRPGAVCR-KRLSPAAK 369          
BLAST of mRNA_L-elsbetiae_contig6218.14808.1 vs. uniprot
Match: A0A6H5JJ54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ54_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 4.520e-120
Identity = 205/385 (53.25%), Postives = 241/385 (62.60%), Query Frame = 0
Query:  146 ALDKCTSTVSTLRSLVPRRFPSTTSVSTRDDDSATLIP-----GLEPYIRTSITDRVHDGIYDTDIAHKSTVSGRVKRGEIRSPSICRHGTRFGETPPGPGRQQFKGPAHYDTSTGFDAISRSSTSLSFPRDKCKYDSYIRRGLGQTTGSTIGPGHYGWETAATAAPGQLAFSAIERWSPQPTSKTVANQGPWDDVKDAWGRGGYIESAVPRECKSYLPREVLWYMNHLELDHFDKESFTTAMRRDPKRYAACFSKTEEPDWRVIGDPALGPGTYAIERAEALTFPAPLGGAGDADPSRPSLPFRMRYTPFDTQQLADGYKTLRPRFSTPRSFLYASELSGGIREAAVGLTGARLSAATLAEKTAGGLIEPTSDARRKRLSPAAK 525
            A+D+C STVST+RSLVPRRF ST +    D  + T  P     GLEP+IR SITDR+HDGIY+TDI HKST+  RVKRGEIR P + R+G RF +   GP RQQ                                                                   FS I RW+ +P+S+   NQGPWDDV+DAWGRGGYIE AVPRECKSYLP+E+L YM  LELD F KESF TA+RR PKRYAA FS T+EP+WRV G+P LGPGTYA+E AE+LT PAP GGAGDADP+RPS+PFR+R TPFDT++LADGYKTL+PRFSTPR+ LY+SEL  G   A V        + T+ E+ AGG I  T    RKRLSPAAK
Sbjct:    5 AVDECPSTVSTIRSLVPRRFHSTEAFGEGDSSTITGGPRSAYEGLEPFIRASITDRIHDGIYETDIGHKSTLGSRVKRGEIRCPKMYRYGKRFADNAAGPERQQ------------------------------------------------------------------EFSTIVRWTKEPSSRASPNQGPWDDVEDAWGRGGYIERAVPRECKSYLPQEILRYMTRLELDQFGKESFATAVRRHPKRYAASFSNTQEPNWRVNGNPNLGPGTYAVELAESLTLPAPQGGAGDADPARPSIPFRVRRTPFDTRRLADGYKTLKPRFSTPRTALYSSELPRGT--AGVASDPPDPPSTTMGERKAGGTIR-TGAVCRKRLSPAAK 320          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6218.14808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHY8_ECTSI7.110e-13159.69Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JJ54_9PHAE4.520e-12053.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6218contigL-elsbetiae_contig6218:1234..5066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6218.14808.1mRNA_L-elsbetiae_contig6218.14808.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6218 1234..5066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6218.14808.1 ID=prot_L-elsbetiae_contig6218.14808.1|Name=mRNA_L-elsbetiae_contig6218.14808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=574bp
MSAAVYDGGRDSFLERSSSKPPSKFDSIEYLDAAATGKGKSRRITSCAAG
GLNNAGPHTCSSDASSPGSNATTAGAWSWRDGNSSIATKSWKEEVSGRRH
KPLTAPSSCKYRKKFYWGPRVTHQGQETKRDVRSTNRGEPVTFALALDKC
TSTVSTLRSLVPRRFPSTTSVSTRDDDSATLIPGLEPYIRTSITDRVHDG
IYDTDIAHKSTVSGRVKRGEIRSPSICRHGTRFGETPPGPGRQQFKGPAH
YDTSTGFDAISRSSTSLSFPRDKCKYDSYIRRGLGQTTGSTIGPGHYGWE
TAATAAPGQLAFSAIERWSPQPTSKTVANQGPWDDVKDAWGRGGYIESAV
PRECKSYLPREVLWYMNHLELDHFDKESFTTAMRRDPKRYAACFSKTEEP
DWRVIGDPALGPGTYAIERAEALTFPAPLGGAGDADPSRPSLPFRMRYTP
FDTQQLADGYKTLRPRFSTPRSFLYASELSGGIREAAVGLTGARLSAATL
AEKTAGGLIEPTSDARRKRLSPAAKAAAVAATAAADPWRIGGRGSRFVRL
ERPSVLDPIRDGSRRRAAAATWSS
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