prot_L-elsbetiae_contig6200.14789.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6200.14789.1
Unique Nameprot_L-elsbetiae_contig6200.14789.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length171
Homology
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BLAST of mRNA_L-elsbetiae_contig6200.14789.1 vs. uniprot
Match: D7G3J0_ECTSI (Kinetochore protein SPC25 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J0_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 2.590e-59
Identity = 106/141 (75.18%), Postives = 128/141 (90.78%), Query Frame = 0 
Query:    6 MDRVETRTTESMAEMAERMSKELRAEMHNSEVQLSHWVAEREQRLGDIQSEFSQTMESRAAELVELRKGEQDTAARQAHCSAVAKKQEEQLQEEIRRLEELRVTEKEELPAKLEVLRAEQQRVEKDLEAKRSEMLTRRHVK 146
            MD  ETRT ESMAEMA+RMSKELR+EMHN+EVQL++WVAEREQRL D+QS+++QTME+RAAE+VELR  ++DT AR+AHC+AV KKQEEQLQEE++RLEELR TE+EE+PAKLEVL AE QR+ K+LEAK+ EMLTRRHVK
Sbjct:    1 MDHAETRTMESMAEMADRMSKELRSEMHNAEVQLNNWVAEREQRLADVQSDYAQTMEARAAEVVELRNADKDTTARRAHCAAVVKKQEEQLQEEVKRLEELRETEREEMPAKLEVLGAEHQRIAKNLEAKQGEMLTRRHVK 141
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6200.14789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3J0_ECTSI2.590e-5975.18Kinetochore protein SPC25 n=2 Tax=Ectocarpus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availableCOILSCoilCoilcoord: 86..113
NoneNo IPR availableCOILSCoilCoilcoord: 118..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6200contigL-elsbetiae_contig6200:4634..10484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6200.14789.1mRNA_L-elsbetiae_contig6200.14789.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6200 3708..10546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6200.14789.1 ID=prot_L-elsbetiae_contig6200.14789.1|Name=mRNA_L-elsbetiae_contig6200.14789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp
MGSVVMDRVETRTTESMAEMAERMSKELRAEMHNSEVQLSHWVAEREQRL
GDIQSEFSQTMESRAAELVELRKGEQDTAARQAHCSAVAKKQEEQLQEEI
RRLEELRVTEKEELPAKLEVLRAEQQRVEKDLEAKRSEMLTRRHVKVAGW
RWTEFVEPWPLATRPPPLRW*
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