prot_L-elsbetiae_contig620.14785.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig620.14785.1
Unique Nameprot_L-elsbetiae_contig620.14785.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length540
Homology
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BLAST of mRNA_L-elsbetiae_contig620.14785.1 vs. uniprot
Match: A0A6H5KTR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTR9_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.190e-36
Identity = 225/422 (53.32%), Postives = 247/422 (58.53%), Query Frame = 0 
Query:    1 MSSRQKKPDARALFKQAKSRKGENDAS--LGSSVAPVPGRGASSSKYVGK----SKEELLALLRAKQAIAAASKANASANQQ-----RRANAKSSGSQAVSATAPRAATQNAGERKPTVKVPVLTS-SGAGRPSAQLA-QGNVQAESGGLTGLLGIGAGDSSXXXXXXXXXXXXXGG----NGATPAPXXXXXXASLPAAIPEXXXAGFFDNDDAEDDAGGADTSENPAGSRENEQGAPAA--AGGFGAERAAELAXXXXXXXXXXAMREAEKLAALRAAGFVVPTPEGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAPNGSALPEGFFDDPDIDAQSRGVDLKAKKKEDEQNEWKDFMSFAEEVKKXXXXXXXXXXXXXXXXXXXXXXXQATMMGRLALLMNKSESIVRK 403
            MS+ QKKPDARALFKQAKSRKGEN     + +  + V GR  +           SKEELLAL RAK+                    +R + KSSGS A               RKPTVKVPV+T+ SGAGRPS Q A +G VQAE  GLTGLLGIGAGDSSXXXXXXXXXXXXX      +  T A    XXX       PE   AGFFD D A                       P A   G FGAERAAELA  XXXXXXXX +REAEKLAA+RAAG +V   +G        XXXXXXXXXXXXXXX                APNGSALPEGFFDDP++DA+SRGVDLKA+KK                   XXXXXXXXXXXXXXXXXXXXXX QATMMGRLALLMNKSESI+ +
Sbjct:    1 MSNHQKKPDARALFKQAKSRKGENSGKNVVSAGGSAVSGRSGAXXXXXXXXXXXSKEELLALYRAKKXXXXXXXXXXXXXXXXXXXTQRPSDKSSGSPATG-------------RKPTVKVPVMTAASGAGRPSVQPAPRGQVQAEGVGLTGLLGIGAGDSSXXXXXXXXXXXXXXXXXXRHPGTDAAPVSXXXXXXXXXXPEGLPAGFFDEDLAXXXXXXXXXXXXXXXXXXXXXXRPQAPPVGRFGAERAAELAAEXXXXXXXXXLREAEKLAAMRAAGLLVVAADGATGGAAADXXXXXXXXXXXXXXX----------------APNGSALPEGFFDDPEMDAKSRGVDLKAEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLALLMNKSESIITR 393
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig620.14785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTR9_9PHAE2.190e-3653.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableCOILSCoilCoilcoord: 354..384
IPR040050Zinc finger protein 830PANTHERPTHR13278UNCHARACTERIZEDcoord: 312..423

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig620contigL-elsbetiae_contig620:9087..14209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig620.14785.1mRNA_L-elsbetiae_contig620.14785.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig620 9012..14748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig620.14785.1 ID=prot_L-elsbetiae_contig620.14785.1|Name=mRNA_L-elsbetiae_contig620.14785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=540bp
MSSRQKKPDARALFKQAKSRKGENDASLGSSVAPVPGRGASSSKYVGKSK
EELLALLRAKQAIAAASKANASANQQRRANAKSSGSQAVSATAPRAATQN
AGERKPTVKVPVLTSSGAGRPSAQLAQGNVQAESGGLTGLLGIGAGDSSS
DEDDNDDGDSNTGGNGATPAPTPTPTPASLPAAIPEGLPAGFFDNDDAED
DAGGADTSENPAGSRENEQGAPAAAGGFGAERAAELAAEAAAIAEADAMR
EAEKLAALRAAGFVVPTPEGVAAATASAVAAAGGGGVVGTGGAGVGTGTA
AGEGDAGAAAPNGSALPEGFFDDPDIDAQSRGVDLKAKKKEDEQNEWKDF
MSFAEEVKKTEKEEEQQEEAVEEDKEQYEELEQATMMGRLALLMNKSESI
VRKRKRSEPAAAAEEGAVREEEEEGRPSGGGAGSRGGETKRPQREQEYQK
PSTSGGGANGGGGGGGGGGGEKADVEVEVAKTGTAMREVAVAAAPADAAA
AEISAMLRGRKRKKKKATQEAFAGDYVAMDPLDWRARGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040050ZNF830