prot_L-elsbetiae_contig62.14782.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig62.14782.1
Unique Nameprot_L-elsbetiae_contig62.14782.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length759
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig62.14782.1 vs. uniprot
Match: D8LJB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB6_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.900e-73
Identity = 190/439 (43.28%), Postives = 235/439 (53.53%), Query Frame = 0 
Query:  349 VVSSSNPWILAELQQALLQHPTTEREGLSEERSXXXXXXXYEQRSGEVIVVRVAMPSAAERKHSVLAVARYMGVDDRLSAVDVSMLAELTGGRRSELLDVLERIQQSSSGGITLSSSXXXXXXXXXXXXSPAGGARPADSNGNSDGRGGASRESWAPLWEAMAMLSAPSVSVGAVGAXXXXXXSPPPGSVHPAELLEECAVDGETLLRLTQEGWLELSPAAPPISRTILEAPG----------------------HPPSTVTVHSATVPLDSLSRGVDRSFVGAPPLRLAAFRRLLDRRCHYRHRSWTTPSSSNSQGVGGGRGEDEGSGVQQGPEYDGGGVAHGVGSSNNSSGISSGAAGVREKYSGGLDHRGTVDAGGRGAERGDQEV--------ESALKRAGYLIEASILSREHARQWGRLSEDGGILASNWAELG 757
            ++SSSNPW+LAELQQAL Q    E +GLSEE S        +  SGEV+VVRVA+PSA +R+  V+AVAR + +  +LS  DVSMLAELTGGRR+ LLD+L+R++QSSS  +T++ +            +   G  P D+   + G    SRE W+PLWEAM MLS PSV VG   A                                  EGWLELSPAAPP S TILE  G                      H    +TVH+A VPL+SLSRGVDRSFVG PPLRLAA+RRL DRR      S   P +S       G    EG+ V  G   DGGG+ H VG  +N  G S   AG R  + G     G + A  +G   GD              L+RAG LIEA +L R+H+R+  +LSED G L++NWAELG
Sbjct:    1 MISSSNPWVLAELQQAL-QQALPESDGLSEENSEKSCDR--QDSSGEVVVVRVALPSATQREQEVIAVARELELHHQLSVADVSMLAELTGGRRAGLLDILKRVKQSSSA-VTIAEACRATVDGEALALAATWGLLPRDAASGAVGEADKSREEWSPLWEAMGMLSVPSVVVGVNAA----------------------------------EGWLELSPAAPPGSGTILEDLGPHSPLAGAEHDSPSSLPLHDGLHRSPPLTVHAAIVPLESLSRGVDRSFVGVPPLRLAAYRRLFDRRS-----STALPETSPGAAKDAGHRRSEGAAVYVGIGDDGGGLQH-VGEGSN--GTSDSRAGSRPAFGGDFVGGGGIGAAVQGESTGDWNGVGLQRAGGNKELERAGCLIEAGVLGRQHSREEAKLSEDRGALSTNWAELG 393
[Close]
BLAST of mRNA_L-elsbetiae_contig62.14782.1 vs. uniprot
Match: A0A6H5JLB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB8_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 9.940e-9
Identity = 54/154 (35.06%), Postives = 73/154 (47.40%), Query Frame = 0 
Query:  244 VSTWESLVLWATLVVLDGQQLDDAAIWALERVL-------SGVVLP----------HDNNDQE-----------GLSLPAGPTARKSCNFVLEIEQP------------------ATTKGGASGERSEPGGL-CGDVVRLGWRLASLRVGSVVV 350
            VSTW+S+VLWAT  VLDG+QLD  A+ ALE+ L       SG + P          +DNND               S  A  TA    +F+L+I  P                  A  +GG + + SEPG L C D+ R GW+LA   +G+V++
Sbjct:    8 VSTWDSVVLWATQAVLDGEQLDTVALSALEQALAGDPCTTSGEICPSPADASSTRSNDNNDDSPQDAQSPASDVSPSNMAASTANGRRSFLLDIGCPPSQELGEGKNATVVAEWAAAVEGGRT-DGSEPGALLCVDLARWGWKLACRGLGNVMI 160
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig62.14782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJB6_ECTSI1.900e-7343.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLB8_9PHAE9.940e-935.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..758

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig62contigL-elsbetiae_contig62:29602..36941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig62.14782.1mRNA_L-elsbetiae_contig62.14782.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig62 29602..36941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig62.14782.1 ID=prot_L-elsbetiae_contig62.14782.1|Name=mRNA_L-elsbetiae_contig62.14782.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=759bp
MGLPRGLKPAAGVFLGLGAGYVVVALDLDSDARRHAAALRREVLIAALHR
RLHGESTATSAPGRPAAAASGPRFYAVTGPDENLTSLGRESVSHALLCGR
AEALMRLHSKQSDGGDDHHDGILSRRPARLAVPYDLTLGSGQFSSLVEQQ
MLRSQDVVVEHGGGRGSDCDGSERRGANDGLRPELDEENRPESDGEAGLE
PQHQPHGPWGSTAGEVNPQEGGSPQSPPSTATVAATATQVLPPVSTWESL
VLWATLVVLDGQQLDDAAIWALERVLSGVVLPHDNNDQEGLSLPAGPTAR
KSCNFVLEIEQPATTKGGASGERSEPGGLCGDVVRLGWRLASLRVGSVVV
SSSNPWILAELQQALLQHPTTEREGLSEERSEERSEENYEQRSGEVIVVR
VAMPSAAERKHSVLAVARYMGVDDRLSAVDVSMLAELTGGRRSELLDVLE
RIQQSSSGGITLSSSSSSSASTSASGGSPAGGARPADSNGNSDGRGGASR
ESWAPLWEAMAMLSAPSVSVGAVGAGAASAPSPPPGSVHPAELLEECAVD
GETLLRLTQEGWLELSPAAPPISRTILEAPGHPPSTVTVHSATVPLDSLS
RGVDRSFVGAPPLRLAAFRRLLDRRCHYRHRSWTTPSSSNSQGVGGGRGE
DEGSGVQQGPEYDGGGVAHGVGSSNNSSGISSGAAGVREKYSGGLDHRGT
VDAGGRGAERGDQEVESALKRAGYLIEASILSREHARQWGRLSEDGGILA
SNWAELGR*
back to top