prot_L-elsbetiae_contig618.14759.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig618.14759.1
Unique Nameprot_L-elsbetiae_contig618.14759.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length181
Homology
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BLAST of mRNA_L-elsbetiae_contig618.14759.1 vs. uniprot
Match: A0A6H5KL80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL80_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.110e-47
Identity = 89/163 (54.60%), Postives = 107/163 (65.64%), Query Frame = 0 
Query:   35 VGGNAAGAAAAGALAEFRAAEELPG------------EEGAEQRVD-----AEECRVTGPCLWCEKDELGLEYCKKTQRRQEVRCPVELAGQNMAAGSAGAPGGGVGVLPSSVRYRPCDYAEEDDFQGLFNFWLAMLVVGALACFGMRRRQQKGGSLYDRRAK 180
            + GN   AA   ALAE R  +E  G            +   +Q V+      EEC+  GPC+WCEKDE+ LEYCK+T RR+EVRC V+ A QNMAAG AG   G VGVLPSSV+YR C YAEED+F GL +FW+ M+ VG  ACF +R+RQQKGGSLY RRAK
Sbjct:  238 ISGNVGAAAVGAALAELRETDEREGGKAEVVVAVGADDANEDQEVEXXXEAVEECKAIGPCVWCEKDEVSLEYCKETGRREEVRCTVQGAAQNMAAGVAG---GAVGVLPSSVKYRSCPYAEEDEFLGLLHFWIFMVAVGVSACFCLRKRQQKGGSLYSRRAK 397
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BLAST of mRNA_L-elsbetiae_contig618.14759.1 vs. uniprot
Match: D7G1T5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T5_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 2.160e-38
Identity = 66/109 (60.55%), Postives = 78/109 (71.56%), Query Frame = 0 
Query:   70 EECRVTGPCLWCEKDELGLEYCKKTQRRQEVRCPVELAGQNMAAGSAGAPGGGVGVLPSSVRYRPCDYAEEDDFQGLFNFWLAMLVVGALACFGMRRRQQKGGSLYDRR 178
            EEC+ TGPC+WCEKDE+ LEYC++T RR+EVRC V+ A QNMAAG AG   G VGVLPSSV+YR C YAEEDDF GLF+FW+ M+              +K GSLYD R
Sbjct:  139 EECKATGPCVWCEKDEVNLEYCRETGRREEVRCTVQGAEQNMAAGGAG---GAVGVLPSSVKYRSCAYAEEDDFLGLFHFWIVMVAXXXXXXXXXXXXXKKVGSLYDER 244
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig618.14759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KL80_9PHAE2.110e-4754.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T5_ECTSI2.160e-3860.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..144
NoneNo IPR availableTMHMMTMhelixcoord: 146..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig618contigL-elsbetiae_contig618:10789..13528 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig618.14759.1mRNA_L-elsbetiae_contig618.14759.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig618 10789..14251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig618.14759.1 ID=prot_L-elsbetiae_contig618.14759.1|Name=mRNA_L-elsbetiae_contig618.14759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
SASGEEGAISGGGETGPAKGSTHDSSSGAGATRSVGGNAAGAAAAGALAE
FRAAEELPGEEGAEQRVDAEECRVTGPCLWCEKDELGLEYCKKTQRRQEV
RCPVELAGQNMAAGSAGAPGGGVGVLPSSVRYRPCDYAEEDDFQGLFNFW
LAMLVVGALACFGMRRRQQKGGSLYDRRAK*
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