prot_L-elsbetiae_contig6178.14756.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6178.14756.1
Unique Nameprot_L-elsbetiae_contig6178.14756.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length452
Homology
BLAST of mRNA_L-elsbetiae_contig6178.14756.1 vs. uniprot
Match: A0A6H5KYL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYL0_9PHAE)

HSP 1 Score: 481 bits (1237), Expect = 6.190e-166
Identity = 245/332 (73.80%), Postives = 276/332 (83.13%), Query Frame = 0
Query:  121 MSIAEQRSLIRGLSSSGLLPQLEKMTLGDGTTSYVRNPERGPGRDLFAAFKKNSCRNLKVLWLQRLDLWDDLESLASALSPTHCPVLEELFLDLALDTDDVARLAACLHKFPTSLKTLGVLAVAIKNRTPEGMFDLTDPEPALQLLADSLSKHPRPSLQCLDVSLHYEPEQEQEPEGMPASRPQRPPFKARTAVMPILNLVKAGKLAGVKHVQLSSCGLDDKGLLTACEAVASMKGIQTLDLSSNQLSLAGAEALAKALWRCRSLHEIVLEESIASEEDAKKASEVFKEFMPWATVRLEDRESRKSLARPSISVAGQDPFFGGGADDDQGMY 452
            MSIAEQRSLIRGLSSSGLLPQLEK+TLGDGTTSYVR+P RGPGRDLFAAF+K  C  L+VLWLQRLDLWDDL++LASAL P HCPVLEELFLDLALDTDDV RLA CLHKFP SLKTLGVLAVAIKNRT +G F++ DPEPALQ LAD+L KHPRP+LQCLD+SLHYEPE E+E    P   PQ PPFKAR A MPI+ L+K+GKL G+KHVQLSSC LDD GL  AC+AVA+M GIQTLD+SSNQLSL GA+ALAKALWRCRSLHEIVLEES+   +DA   S VFKE+MPWATVR++DR+ RK+LAR  ++ AG          DDQG +
Sbjct:    1 MSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCVKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEE--LPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVP-DDAAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGQAHDAVADDQGAF 329          
BLAST of mRNA_L-elsbetiae_contig6178.14756.1 vs. uniprot
Match: D7FZG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG4_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 1.130e-153
Identity = 253/448 (56.47%), Postives = 286/448 (63.84%), Query Frame = 0
Query:    5 GDAADRFGAAAGEKALRVADCCPVRAWSFLLGALPKIEEVIIVEGAGTDEVALEQVWLHLLPLCTNLRSFFLNFEDYSKCPVDGDHPPINVKKFAVFLQAKKPFPKLRELHLELGSMSIAEQRSLIRGLSSSGLLPQLEKMTLGDGTTSYVRNPERGPGRDLFAAFKKNSCRNLKVLWLQRLDLWDDLESLASALSPTHCPVLEELFLDLALDTDDVARLAACLHKFPTSLKTLGVLAVAIKNRTPEGMFDLTDPEPALQLLADSLSKHPRPSLQCLDVSLHYEPEQEQEPEGMPASRPQRPPFKARTAVMPILNLVKAGKLAGVKHVQLSSCGLDDKGLLTACEAVASMKGIQTLDLSSNQLSLAGAEALAKALWRCRSLHEIVLEESIASEEDAKKASEVFKEFMPWATVRLEDRESRKSLARPSISVAGQDPFFGGGADDDQGMY 452
            G  ADR+GAAAGEK LRVADCCPVRAWS+LLGAL K                                                                                                     LEK+TLGDGTTSYVR+P RGPGRDLFAAF+K  C  L+VLWLQRLDLWDDL++LASAL P HCPVLEELFLDLALDTDDV RLA CLHKFP SLKTLGVLAVAIKNRT +G F++ DPEPALQ LAD+L KHPRP+LQCLD+SLHYEPE E+E    P   PQ PPFKAR A MPI+ L+K+GKL G+KHVQLSSC LDD GL  AC+AVA+M GIQTLD+SSNQLSL GA+ALAKALWRCRSLHEIVLEES+   +D    S VFKE+MPWATVR++DR+ RK+LAR  ++ AG          DDQG +
Sbjct:  203 GGGADRYGAAAGEKTLRVADCCPVRAWSYLLGALTK-----------------------------------------------------------------------------------------------------LEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCAKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTEDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEE--LPPDEPPQPPPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVP-DDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGQAYDALADDQGAF 546          
BLAST of mRNA_L-elsbetiae_contig6178.14756.1 vs. uniprot
Match: A0A835Z7K9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K9_9STRA)

HSP 1 Score: 307 bits (787), Expect = 8.410e-94
Identity = 171/418 (40.91%), Postives = 247/418 (59.09%), Query Frame = 0
Query:   27 PVRAWSFLLGALPKIEEVIIVEGAGTDEVALEQVWLHLLPLCT-NLRSFFLNFEDYSKCPVDG----DHPPINVKKFAVFLQAKKPFPKLRELHLELGSMSIAEQRSLIRGLSSSGLLPQLEKMTLGDGTTSYVRNPERGPGRDLFAAFKKNSCRNLKVLWLQRLDLWDDLESLASALS-PTHCPVLEELFLDLALDTDDVARLAACLHKFPTSLKTLGVLAVAIKNRTPEGMFDLTDPEPALQLLADSLSKHPRPSLQCLDVSLHYE--PEQEQEPEGMPASRPQRPP-FKARTAVMPILNLVKAGKLAGVKHVQLSSCGLDDKGLLTACEAVASMKGIQTLDLSSNQLSLAGAEALAKALWRC-RSLHEIVLEESIASEEDAKKASEVFKEFMPWATVRLEDRESRKSLARPSISV 434
            P+  W++LL  LP + +V I EG  T+E ALE++W  +LPLC   LR   L+FE Y+   ++G    DHPP+NVK  AV L   +PFP LRELHLEL SMSI EQRSL+RGL   G+L +LE +T+G GT++Y R P +GPG+DL AA  K+   NL +LWLQRLD+WDD E +  AL  P  CP L +L+LDL LD +D   LAA LH  P SLKTLG++ + I  R  +G F    PE  ++++A ++  HPR  L+C+D+ LHYE  P+  +EPE +  + P  PP    R   +P+L  ++      + H+QL +C L  K         A++  +QTLD+S N++S    E L  AL      ++EI+ EE + ++E+A   + + +   P      + R++ +      + V
Sbjct:  204 PLMVWTYLLARLP-LTDVTITEGPATNEQALEELWERVLPLCAPTLRRLALSFEGYAAREMEGEQDVDHPPVNVKHLAVVLARDRPFPHLRELHLELNSMSITEQRSLVRGLGQGGVLQRLESLTIGGGTSAYAR-PAKGPGKDLAAAITKHGAPNLSLLWLQRLDIWDDFEGVFRALGDPALCPSLRQLYLDLTLDIEDSKALAAALHLCPPSLKTLGMMVMGITARDDQGNFKRCSPEAGVEVIAKAMLAHPRDDLECVDLCLHYEDAPDDNEEPEPIDPAHPPPPPGLSQRRDAVPLLEALRGAAAPRLLHLQLPNCRLTGKAFSEVLSTAAALPRLQTLDISGNEMSEVLVEELVAALTTSVPHVYEIMAEECVKTDEEANTLAALCRARAPRVKFSWKSRDAAEREGTLEVDV 619          
BLAST of mRNA_L-elsbetiae_contig6178.14756.1 vs. uniprot
Match: A0A835YQN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN0_9STRA)

HSP 1 Score: 255 bits (651), Expect = 3.450e-73
Identity = 145/344 (42.15%), Postives = 201/344 (58.43%), Query Frame = 0
Query:   27 PVRAWSFLLGALPKIEEVIIVEGAGTDEVALEQVWLHLLPLCT-NLRSFFLNFEDYSKCPVDGD--------------------------HPPINVKKFAVFLQAKKPFPKLRELHLELGSMSIAEQRSLIRGLSSSGLLPQLEKMTLGDGTTSYVRNPERGPGRDLFAAFKKNSCRNLKVLWLQRLDLWDDLESLASALSP-THCPVLEELFLDLALDTDDVARLAACLHKFPTSLKTLGVLAVAIKNRTPEGMFDLTDPEPALQLLADSLSKHPRPSLQCLDVSLHYEPEQEQEPEGMPASRPQRPPFKARTAV---MPILNLVKAGKLAGVKHVQLSSCGL 339
            P+  W+FLL  LP ++ V I  G   DE AL ++W  +LP C   LR F L FE Y   P  GD                          +PPINVK+FA+ L  + PFP LRELHLEL SMSI+EQRSL+RG++  GLL +LE +T+G GT+ Y R P+ G G++L  A +++   NL++LWLQR D+WDD   + SALS  T CP L+EL++D  LD DD   LAA L   PT LKTLG++ +A++ R   G F    P PA+  +A +L +  RP L C+D+ LH+EP QE E +   +     PP   ++ V   +P+L   +AG +  ++H+QL +C L
Sbjct:  284 PLMVWTFLLARLPLLD-VTITPGVANDEDALGELWERVLPACAPQLRRFALAFEGYQPPPPQGDXXXXXXXXXXXXXXXXXPSDQPPPIDYPPINVKRFALMLATRNPFPALRELHLELSSMSISEQRSLVRGITQGGLLARLECLTMGGGTSVYAR-PKIGAGQELATALREHGAPNLRLLWLQRFDVWDDFPGVFSALSDRTLCPALKELYIDATLDHDDTLALAAALPLVPTCLKTLGMMVMALRERDHLGYFKRVSPVPAVTAIATALLEAQRPQLGCVDLCLHFEPPQEGETDEWYSDELPPPPPADKSPVDASIPLLRAFQAGAVPNMRHLQLPNCRL 625          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6178.14756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KYL0_9PHAE6.190e-16673.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZG4_ECTSI1.130e-15356.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z7K9_9STRA8.410e-9440.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQN0_9STRA3.450e-7342.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 318..428
e-value: 3.9E-14
score: 54.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 57..291
e-value: 3.6E-9
score: 37.8
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 329..406
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 66..407

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6178contigL-elsbetiae_contig6178:233..11102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6178.14756.1mRNA_L-elsbetiae_contig6178.14756.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6178 233..11102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6178.14756.1 ID=prot_L-elsbetiae_contig6178.14756.1|Name=mRNA_L-elsbetiae_contig6178.14756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=452bp
MPGAGDAADRFGAAAGEKALRVADCCPVRAWSFLLGALPKIEEVIIVEGA
GTDEVALEQVWLHLLPLCTNLRSFFLNFEDYSKCPVDGDHPPINVKKFAV
FLQAKKPFPKLRELHLELGSMSIAEQRSLIRGLSSSGLLPQLEKMTLGDG
TTSYVRNPERGPGRDLFAAFKKNSCRNLKVLWLQRLDLWDDLESLASALS
PTHCPVLEELFLDLALDTDDVARLAACLHKFPTSLKTLGVLAVAIKNRTP
EGMFDLTDPEPALQLLADSLSKHPRPSLQCLDVSLHYEPEQEQEPEGMPA
SRPQRPPFKARTAVMPILNLVKAGKLAGVKHVQLSSCGLDDKGLLTACEA
VASMKGIQTLDLSSNQLSLAGAEALAKALWRCRSLHEIVLEESIASEEDA
KKASEVFKEFMPWATVRLEDRESRKSLARPSISVAGQDPFFGGGADDDQG
MY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf