prot_L-elsbetiae_contig6173.14752.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6173.14752.1
Unique Nameprot_L-elsbetiae_contig6173.14752.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length507
Homology
BLAST of mRNA_L-elsbetiae_contig6173.14752.1 vs. uniprot
Match: A0A6H5JIQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.890e-72
Identity = 139/255 (54.51%), Postives = 167/255 (65.49%), Query Frame = 0
Query:  257 SLRKHRNRR--SFTFGVTADGAPIPPYK-FSGVVFALFLGYLDLGTDVSTLISYYQANQMWWFAIGLVFVVGPALVAAKFVLRDEDWWRRGLVVLHLGMLWEAFASLRSSQYSHVLATLATMEPLYEAAPQLMLQMYTVLLDWGRDGAQ-SGRLLFSIVVSCLSLARATTSLVAEHPLSQLPPAFDVPIWRVPCLAWLLETITGLAFGALPKEGSVDLDGCRWPTVTFVWAFLLYQGLEIWSKFFSLALLALVFR 507
            SL  H NR+  +F F VT DGAP+P YK +  V   L LGY D+GTDV  ++SYYQA+ MWWFA+G++F++GPAL AA  +LR E W RR LV L LGML+ A  S  +S YS VLA+L  MEPLYE+ PQLMLQ+Y +LL+W  DG     R L SI+ SC SLA ATT LVAE  LS+L P  D      P L       TGL FGA+P   SV +   RW +  FVWAFL YQ LEI +KF SL LLALV+R
Sbjct:   34 SLLDHPNRKGGAFQFHVTEDGAPVPGYKSWKSVGIQLVLGYADVGTDVDAVVSYYQADHMWWFALGMIFIIGPALFAAIVLLRREHWLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDNDGTMWLSRRLLSILFSCFSLAYATTGLVAEQALSRLAPTADAASASCPGL-------TGLVFGAVPANSSVAVYRSRWNSQKFVWAFLFYQVLEIGAKFISLGLLALVWR 281          
BLAST of mRNA_L-elsbetiae_contig6173.14752.1 vs. uniprot
Match: D7FJQ6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ6_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 3.940e-42
Identity = 104/252 (41.27%), Postives = 153/252 (60.71%), Query Frame = 0
Query:  257 SLRKHRNRRSFTFGVTADGAPIPPYKFS-GVVFALFLGYLDLGTDVSTLISYYQANQMWWFAIGLVFVVGPALVAAKFVLRDEDWWRRGLVVLHLGMLWEAFASLRSSQYSHVLATLATMEPLYEAAPQLMLQMYTVLLDWGRDGAQSGRLLFSIVVSCLSLARATTSLVAEHPLSQLPPAFDV--PIWRVPCLAWLLETITGLAFGALPKEGSVDLD-GCRWPTVTFVWAFLLYQGLEIWSKFFSLALLAL 504
            SLR HRN R F F V   GAPIPP++    ++ AL LGYLDL TD++T++SY+++    WFAIG+ F+ GPAL A  +VLR++   R       LG++ E   S++   YSH L  L  +EPL+++ P L+LQ + +L+    +   + R++ S++VS LSLA A+T +VAEHPLSQL  +  V  P  ++P  +        + FG +P  GSV +  G +     FVW FLLYQ +EI S+  SL ++A+
Sbjct:  269 SLRNHRNFRRFVFAVPEHGAPIPPWRSKRSLIPALVLGYLDLFTDLATVLSYWRSGLTLWFAIGVAFITGPALCAGAYVLREKTVGRGIAAATQLGLIVEGLISVKEESYSHALVALRVLEPLFQSLPMLLLQTHVLLVS---EECLALRVV-SVMVSTLSLAVASTGIVAEHPLSQLRWSRGVKYPTAKLPLAS-------SMFFGTVPFAGSVCVRMGFQLHPQDFVWWFLLYQLMEIISRVLSLGVIAM 509          
BLAST of mRNA_L-elsbetiae_contig6173.14752.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 2.710e-30
Identity = 91/264 (34.47%), Postives = 138/264 (52.27%), Query Frame = 0
Query:  258 LRKHRNRRSFTFGVTADGAPIPPYKFSG-----VVFALFLGYLDLGTDVSTLISYYQANQMWWFAIGLVFVVGPALVAAKFVLRDEDWWRRGLVVLHLGMLWEAFASLRSSQYSHVLATLATMEPLYEAAPQLMLQMYTVLLDWGRDGAQSGRL---LFSIVVSCLSLARATTSLVAEHPL--SQLPPAFDVPIWRV--PCLAWLLETITGLAFGALPKEGSVDLDG-CRWPTV-TFVWAFLLYQGLEIWSKFFSLALLALVFR 507
            L +H   + F  G   DG P+P    +G     ++  + LGYLDL +D+ T +SYY +  ++WF + + F +GPA++ + F L +    RR LV   L +L EA  S  S  YS VLA +  +EPL+E+ PQL+LQ+Y +LL W      +  L   + S+ +S +SLA A T + +   L  ++L        +R+   C      ++T L F  +P++G   L G   W    T VW   LY  LEI S+F  L ++ALV R
Sbjct:  164 LAEHPRFKKFIVGRAMDGPPLPHVNDAGHAVKILIVPVALGYLDLASDLYTAVSYYNSGHLFWFVLVVAFALGPAVIVSAFFLPEFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPDC-----PSVTALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLR 422          
BLAST of mRNA_L-elsbetiae_contig6173.14752.1 vs. uniprot
Match: A0A6H5JCI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI0_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 9.730e-23
Identity = 77/231 (33.33%), Postives = 114/231 (49.35%), Query Frame = 0
Query:  290 LFLGYLDLGTDVSTLISYYQANQMWWFAIGLVFVVGPALVAAKFVLRDEDWWRRGLVVLHLGMLWEAFASLRSSQYSHVLATLATMEPLYEAAPQLMLQMYTVLLDWGRDGAQSGRLLF---SIVVSCLSLARATTSLVAEHPL-SQLPPAFDVPIWRVPCL-------AWLLETITGLAFGALPKEGSVDLDGC--RWPTVTFVWAFLLYQGLEIWSKFFSLALLALVFR 507
            +F  YLD+GTD+ T  +Y+Q   + W  +GLV  + P ++ A F L    + RR LVVL L +L EAF++     YS  L  +  +EPL+EAA  L+LQ++ +L+ W  +       L    S+ +S  S + A T   +   L +   P  DV  W   C         W   + T L F   P +G ++L GC  +    T VW   LY  +E+ S+F  LA L L+ R
Sbjct:   15 VFRPYLDIGTDIYTSYTYFQPGHVVWGTLGLVIALLPGIIEALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRKLGFVRVVEPLFEAALHLLLQLHAILVPWNEEPPSPNTFLAPFRSVFISVGSQSYAVTDNSSVEGLKAAATPVGDVSNWCSRCSRPSCCWPTWCPWSGTRLPFSRAPTKGELNL-GCLGKMHPQTQVWVCFLYHIVEVVSRFIPLAFLILLTR 244          
BLAST of mRNA_L-elsbetiae_contig6173.14752.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.610e-22
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 0
Query:  270 GVTADGAPIPPYKFSG-----VVFALFLGYLDLGTDVSTLISYYQANQMWWFAIGLVFVVGPALVAAKFVLRDEDWWRRGLVVLHLGMLWEAFASLRSSQYSHVLATLATMEPLYEAAPQLMLQMYTVLLDWGRDGAQSGRLLF 408
            G   DG P+P  +        +V  + LGY DL +D+ T + Y++ +   W  +GL F +GPAL+ + F L    W+RR LV  HL +++EA+ ++   QYS VLA +  +EPL+E+ PQL+LQ+Y +L+ W       GRL++
Sbjct:   42 GFAGDGPPLPQVEDDDHAKKILVLPVSLGYPDLVSDIFTAVFYFRGDHPVWGGLGLAFALGPALITSIFFLSGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILWTETMLSHGRLVW 185          
BLAST of mRNA_L-elsbetiae_contig6173.14752.1 vs. uniprot
Match: A0A6H5K7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.230e-16
Identity = 85/273 (31.14%), Postives = 120/273 (43.96%), Query Frame = 0
Query:  258 LRKHRNRRSFTFGVTADGAPIPPYKFSG-----VVFALFLGYLDLGTDVSTLISYYQANQMWWFAIGLVFVVGPALVAAKFVLRDEDWWRRGLVVLHLGMLWEAFASLRSSQYSHVLATLATMEPLYEAAPQLMLQMYTVLLDWGRDGAQSGRL---LFSIVVSCLSLARATTSLVAEHPL-------------SQLPPAFDVPIWRVPCLAWLLETITGLAFGALPKEGSVDLDG-CRWPTV-TFVWAFLLYQGLEIWSKFFSLALLALVFR 507
            L +H   + F  G   DG P+P    +G     ++  + LGYLDL +D+ T                      P  + A +   +    RR LV   L +L EA  S  S  YS VLA +  +EPL+E+ PQL+LQ+Y +LL W      +  L   + S+ +S +SLA A T + +   L             S++ P  D P             ITGL F  +P++G   L G   W    T VW   LY  LEI S+F  L ++ALV R
Sbjct:   93 LAEHPRFKKFIVGRAMDGPPLPHINDTGHAVKILIVPVALGYLDLTSDLYT----------------------PTTIQATYF--EFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCP--DCPF------------ITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLR 327          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6173.14752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JIQ5_9PHAE1.890e-7254.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJQ6_ECTSI3.940e-4241.27Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
D8LFI4_ECTSI2.710e-3034.47Leucine Rich Repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5JCI0_9PHAE9.730e-2333.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W6_9PHAE3.610e-2237.50HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5K7Q2_9PHAE1.230e-1631.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 237..261
e-value: 20.0
score: 10.8
coord: 67..91
e-value: 0.92
score: 18.5
coord: 189..213
e-value: 14.0
score: 12.1
coord: 115..139
e-value: 64.0
score: 6.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..270
e-value: 9.9E-79
score: 267.2
IPR018629XK-related proteinPFAMPF09815XK-relatedcoord: 286..423
e-value: 3.9E-14
score: 52.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 94..151
e-value: 6.9E-7
score: 28.9
coord: 191..250
e-value: 1.3E-6
score: 28.1
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 69..91
e-value: 0.98
score: 10.2
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 106..258
NoneNo IPR availablePANTHERPTHR27000:SF531MDIS1-INTERACTING RECEPTOR LIKE KINASE 1coord: 62..154
coord: 3..109
NoneNo IPR availablePANTHERPTHR27000:SF531MDIS1-INTERACTING RECEPTOR LIKE KINASE 1coord: 106..258
NoneNo IPR availablePANTHERPTHR27000:SF531MDIS1-INTERACTING RECEPTOR LIKE KINASE 1coord: 176..260
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 3..109
coord: 176..260
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 62..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 480..506
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 336..405
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..312
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 427..479
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 507..507
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..335
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 406..426
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 3..259
NoneNo IPR availableTMHMMTMhelixcoord: 313..335
NoneNo IPR availableTMHMMTMhelixcoord: 484..506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6173contigL-elsbetiae_contig6173:2649..10478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6173.14752.1mRNA_L-elsbetiae_contig6173.14752.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6173 2649..10480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6173.14752.1 ID=prot_L-elsbetiae_contig6173.14752.1|Name=mRNA_L-elsbetiae_contig6173.14752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=507bp
VRLHVNGLTGSIPSELGNLTALTAISLFRNKLTGPIPPVLGMLTALEILE
VHDNSLTGPIPKELGDLSNLEELRLNRNQLTQSIPSELGNLAALKILHLY
GNKLTGPIPSALGKLSNLKQLVLSFNDLIGFIPKKLGDLSRLEFLGLNDN
KTADLVEGGHILARTDSGRVDGIGGSGLSGHIPKEIGKLTALRTLSLAKN
NLEGSIPDELGSLSNLEVLRLNGNDLTGSIPTELGALSNLKELRLNDNHL
SGEVPRSLRKHRNRRSFTFGVTADGAPIPPYKFSGVVFALFLGYLDLGTD
VSTLISYYQANQMWWFAIGLVFVVGPALVAAKFVLRDEDWWRRGLVVLHL
GMLWEAFASLRSSQYSHVLATLATMEPLYEAAPQLMLQMYTVLLDWGRDG
AQSGRLLFSIVVSCLSLARATTSLVAEHPLSQLPPAFDVPIWRVPCLAWL
LETITGLAFGALPKEGSVDLDGCRWPTVTFVWAFLLYQGLEIWSKFFSLA
LLALVFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR018629XK-rel
IPR001611Leu-rich_rpt