prot_L-elsbetiae_contig6167.14742.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6167.14742.1
Unique Nameprot_L-elsbetiae_contig6167.14742.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length207
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6167.14742.1 vs. uniprot
Match: D8LPQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ7_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.170e-37
Identity = 102/189 (53.97%), Postives = 113/189 (59.79%), Query Frame = 0 
Query:   26 GGGRGDRNGPWNGPQFPLPPDGRFRPQP-----FNGGGDSSGRPSGGVEERELEEMRXXXXXXXX---GPMMRDKRRRSGSRAGGPSETDQAPLESFGGAGSGTLVTGPDAYRSGHSPAKRLRSDIMPPGGPNXXXXXXXXXXXRGGMRGDEDMPRRPPGMLPPVGPGRGLEPGMMRGPEPGMHGRGRG 206
            GGGR  + GPWN P  P P +GR RPQ      FNG     GR  GG +ER+ + MR           GP++RDKRRRSGSR  GPSE DQAP +SF GAG+GTL  GP AY  GHSPAKRLR D  PP               RGGMRG+EDM RRP GM P  GPGRG+EPGM RGP     GRG G
Sbjct:  643 GGGRMGQ-GPWNDPHVPYPSEGRPRPQQPQRETFNGE-RRRGRSPGGDDERKFDGMRAGAGANGGDEPGPVLRDKRRRSGSRTTGPSEADQAPGDSFAGAGTGTLTAGPGAYGPGHSPAKRLRGDEPPP----FADVGVAAPGGRGGMRGEEDMLRRPSGMRP-GGPGRGVEPGM-RGPXXXXQGRGMG 823
[Close]
BLAST of mRNA_L-elsbetiae_contig6167.14742.1 vs. uniprot
Match: A0A6H5LNS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNS9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 4.070e-9
Identity = 52/113 (46.02%), Postives = 57/113 (50.44%), Query Frame = 0 
Query:   94 RRSGSRAGGPSETDQAPLESFGGAGSGTLVTGPDAYRSGHSPAKRLRSDIMPPGGPNXXXXXXXXXXXRGGMRGDEDMPRRPPGMLPPVGPGRGLEPGMMRGPEPGMHGRGRG 206
            RR G   GG  E +   + +  GA  G    GP     G  P       I  PGG             RGGMRG+EDM RRPPGM P  GPGRG+EP  MRGPEPGM GRG G
Sbjct:  643 RRRGRSPGGVDEREFDGMRAGAGANGGD---GPGPVLRGDEPLPFADVGIAAPGG-------------RGGMRGEEDMLRRPPGMRP-GGPGRGVEP-EMRGPEPGMQGRGMG 737
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6167.14742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPQ7_ECTSI2.170e-3753.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LNS9_9PHAE4.070e-946.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6167contigL-elsbetiae_contig6167:477..2150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6167.14742.1mRNA_L-elsbetiae_contig6167.14742.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6167 477..2150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6167.14742.1 ID=prot_L-elsbetiae_contig6167.14742.1|Name=mRNA_L-elsbetiae_contig6167.14742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
GWQPRGRGDPISGAPALVGPPGEFRGGGRGDRNGPWNGPQFPLPPDGRFR
PQPFNGGGDSSGRPSGGVEERELEEMRGGGAGGGEGPMMRDKRRRSGSRA
GGPSETDQAPLESFGGAGSGTLVTGPDAYRSGHSPAKRLRSDIMPPGGPN
SAGGPPPPPGGRGGMRGDEDMPRRPPGMLPPVGPGRGLEPGMMRGPEPGM
HGRGRGR
back to top