prot_L-elsbetiae_contig6147.14715.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6147.14715.1
Unique Nameprot_L-elsbetiae_contig6147.14715.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length152
Homology
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BLAST of mRNA_L-elsbetiae_contig6147.14715.1 vs. uniprot
Match: A0A6H5KEV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEV5_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.930e-31
Identity = 88/145 (60.69%), Postives = 99/145 (68.28%), Query Frame = 0 
Query:    1 GVNDLLVVLPHGRSVADVLDKVRKRLPPDLSPALAARRAEQDTARTDTDNVDKSRKXXXXXYHHGDDCGAGRQQDSSRRRSRADLEAFRRDMLRAALGAGLAEALALGAAGRGAPASAARVAGTDENNALRVAGLASSEAARVLD 145
            G++D+LVVLP GRSVADVLDKV  RLP DL+PALAA+R       TD D  + S+K       H D  G   QQ        + LEA+RRDMLRAALG GLAEALALG   RGAPA+AARVAGTDE+NA RVA LAS EAA  LD
Sbjct:  273 GIDDMLVVLPQGRSVADVLDKVEARLPKDLTPALAAQR-------TDDDATNNSKKRPRRHRKHDD--GERPQQ-----LPESQLEAYRRDMLRAALGCGLAEALALGPK-RGAPAAAARVAGTDEDNARRVAILASGEAATALD 402
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6147.14715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KEV5_9PHAE1.930e-3160.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6147contigL-elsbetiae_contig6147:1516..2861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6147.14715.1mRNA_L-elsbetiae_contig6147.14715.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6147 1516..2863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6147.14715.1 ID=prot_L-elsbetiae_contig6147.14715.1|Name=mRNA_L-elsbetiae_contig6147.14715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
GVNDLLVVLPHGRSVADVLDKVRKRLPPDLSPALAARRAEQDTARTDTDN
VDKSRKRKRHRYHHGDDCGAGRQQDSSRRRSRADLEAFRRDMLRAALGAG
LAEALALGAAGRGAPASAARVAGTDENNALRVAGLASSEAARVLDVRLEE
AV
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