prot_L-elsbetiae_contig614.14707.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig614.14707.1
Unique Nameprot_L-elsbetiae_contig614.14707.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length242
Homology
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BLAST of mRNA_L-elsbetiae_contig614.14707.1 vs. uniprot
Match: D8LD48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD48_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 9.420e-38
Identity = 130/254 (51.18%), Postives = 157/254 (61.81%), Query Frame = 0 
Query:    1 MALFPKAQQ-GRRG--GGGRGAASPSAVA---------RKTTPRKNRQKATIGRTSPRLHLTHTRTQASARRGAG-AGTRVASARQQSSTARGGASAAGTRRXXXXXXXXXXXXXXXXXXXXXARTGTKKVGQGDGVAKAVDGLKGELATATEAAMEKMEAGCDALVAAALDWCSSAMSGREEEIETAEATLRTMESREASVTLPCSGMLKTVESNQVNLSAMVERCRATLDNLQQAEIRKLKSSLDRAMGVKS 241
            MA+FP+ QQ GR G  GGGRG                 R+T   K R  +++ R+SPRLHLT  RT A+ARRG+G  G R AS ++QS+ A+G  S+ G  R     XXXXXXXXXXXXXXXX           D VAK +  LKG+     + AM K+EA C   V   L+ CS+ +SGREE  ETA A LR +E+R+AS+    S MLK VESN  NLSA+VERCRA LD+LQQAE RKLKS LDRA G KS
Sbjct:    1 MAVFPRVQQQGRHGSRGGGRGTXXXXXXXXXXXXXXXXRRTVTAKKRASSSV-RSSPRLHLTQKRTPANARRGSGPVGNRFASNQRQSTKAKGRTSSVGAHRDSSGGXXXXXXXXXXXXXXXXXXX-XXXXSPADDVAKVMIDLKGDSTAVIDKAMGKVEAECGTFVMTVLESCSAGVSGREEHDETAAAALREIETRQASLASRRSEMLKEVESNSSNLSAVVERCRAALDSLQQAESRKLKSGLDRATGTKS 252
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BLAST of mRNA_L-elsbetiae_contig614.14707.1 vs. uniprot
Match: A0A6H5LLS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLS0_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.170e-29
Identity = 70/120 (58.33%), Postives = 83/120 (69.17%), Query Frame = 0 
Query:  122 DGVAKAVDGLKGELATATEAAMEKMEAGCDALVAAALDWCSSAMSGREEEIETAEATLRTMESREASVTLPCSGMLKTVESNQVNLSAMVERCRATLDNLQQAEIRKLKSSLDRAMGVKS 241
            DGVAK +  LKG++    + AM K+EA C   V   L+ CS+ +SGREE  ETA A LR M++R+AS+    S MLK V SN  NLSA+VERCRA LDNLQQAE RKLKS LDRA G KS
Sbjct:   60 DGVAKLMIDLKGDITAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREEHYETAAAALREMKTRQASMASRRSEMLKEVASNSSNLSAVVERCRAALDNLQQAESRKLKSGLDRATGTKS 179
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig614.14707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD48_ECTSI9.420e-3851.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LLS0_9PHAE1.170e-2958.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig614contigL-elsbetiae_contig614:1801..6158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig614.14707.1mRNA_L-elsbetiae_contig614.14707.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig614 1143..6491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig614.14707.1 ID=prot_L-elsbetiae_contig614.14707.1|Name=mRNA_L-elsbetiae_contig614.14707.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp
MALFPKAQQGRRGGGGRGAASPSAVARKTTPRKNRQKATIGRTSPRLHLT
HTRTQASARRGAGAGTRVASARQQSSTARGGASAAGTRRTGNTGSRGGGG
GGGGGGGGGGARTGTKKVGQGDGVAKAVDGLKGELATATEAAMEKMEAGC
DALVAAALDWCSSAMSGREEEIETAEATLRTMESREASVTLPCSGMLKTV
ESNQVNLSAMVERCRATLDNLQQAEIRKLKSSLDRAMGVKS*
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