prot_L-elsbetiae_contig6134.14700.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6134.14700.1
Unique Nameprot_L-elsbetiae_contig6134.14700.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length298
Homology
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: A0A6H5JWF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF7_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 1.340e-109
Identity = 193/265 (72.83%), Postives = 209/265 (78.87%), Query Frame = 0
Query:   39 AEAIAWRRRVMSSLVNTFVGRGNWRLALGLLEDLGKERCSASSGDTSSLGRSPPESSAPGRGE---AQPPQTAEATDDALRVEALSRIGRVFLQFGSLRDAEIYFRRAEEAAAAEGAREDHPRVLVNRGLLHFSNNEFVAAQENFRNAAT--AXXXXXXXXPD-TDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS 297
            AEA  WRRRVM +LVN FV RGNWR+ALGLLEDLG+++C           RS P  S+    +   A   + A A  D LRVE LSRIGRVFLQFGSL DAE+YFRRAE AAAA G+   +PR+LVNRGLL+FS NEFVAAQENFRNAAT  A        PD +DD WLWATLDQGAGLLD+ALNNLSLAMVYSCDV+RGV TLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDID SSFRMS
Sbjct:  471 AEATTWRRRVMLNLVNMFVARGNWRMALGLLEDLGEDQCGE---------RSTPACSSSSHEDVTGAAREEGARAPVDDLRVELLSRIGRVFLQFGSLEDAEVYFRRAEAAAAAVGS---NPRILVNRGLLNFSRNEFVAAQENFRNAATEAAMLAAKEEPPDDSDDNWLWATLDQGAGLLDTALNNLSLAMVYSCDVLRGVRTLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDPSSFRMS 723          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: D8LLE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE2_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 1.190e-95
Identity = 158/193 (81.87%), Postives = 167/193 (86.53%), Query Frame = 0
Query:  108 AEATDDALRVEALSRIGRVFLQFGSLRDAEIYFRRAEEAAAAEGAREDHPRVLVNRGLLHFSNNEFVAAQENFRNAAT--AXXXXXXXXPD-TDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS 297
            A A+ D +RVE LSRIGRVFLQFGSL DAE+YFRRAE AAA  G+   +PR+LVNRGLL FS NEFVAAQENFRNAAT  A        PD +DD WLWATLDQGAGLLD+ALNNLSLAMVYSCDV+RGV TLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS
Sbjct:  143 ARASVDNVRVELLSRIGRVFLQFGSLEDAEVYFRRAEAAAAVAGS---NPRILVNRGLLDFSRNEFVAAQENFRNAATEAAMLAAKEEPPDGSDDNWLWATLDQGAGLLDAALNNLSLAMVYSCDVLRGVRTLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS 332          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: A0A6H5KFR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR3_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 6.050e-47
Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 0
Query:  197 TDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS 297
            +DD WL ATLDQGAGLLDSAL NLSLAM  SCDV+RGV TL+GLIRK+PRLYMLDVVIFNLCTLYDLSFDAVASAKK RTLQAV QRFRLEDID SSFRMS
Sbjct:   12 SDDIWLRATLDQGAGLLDSALTNLSLAMC-SCDVLRGVRTLKGLIRKNPRLYMLDVVIFNLCTLYDLSFDAVASAKK-RTLQAVTQRFRLEDIDTSSFRMS 110          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: A0A7S2U556_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U556_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.570e-27
Identity = 87/290 (30.00%), Postives = 136/290 (46.90%), Query Frame = 0
Query:   43 AWRRRVMSSLVNTFVGRGNWRLALGLLEDLGKERCSA-SSGDTSSLGRSPPESSAPGRGEAQPPQTAEATDDALRVEALSRIGRVFLQFGSLRDAEIYFRRAEEA--------------AAAEGAREDHPRVLVNRGLLHFSNNEFVAAQENFRNAAT-----------------AXXXXXXXXPDT---DDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS 297
            +W  ++ ++L N FV +  WRLA+   + L ++     +      L       S P   E      ++A   AL +E LSR GR+ LQ G+L +A + F  A  A              + +   ++   +VL+N GLL FSN+ + +A E+F  A                            P T   D      T D    ++   LNNL+L  +Y C + + V  +E L+R++P LY+ + ++FNLCTLY+L  D   S +KKR LQ++A+RF L DI   SFR++
Sbjct:  227 SWIGKIDNALANAFVRQQEWRLAITSYQLLLEQSLPILAPAQAQLLLEKAKTESVPVSLENNESSVSDALYAALEIEILSRQGRILLQVGALEEASVVFDTAANAMQRLEDSGITIEFMSKSLAIQQAPAQVLLNEGLLQFSNHTYASAMESFTRALEWLSQPKGGTNKRKSNLGTGNLLLLYNPSTIAQDVLGPGITCDSNHNVMTECLNNLALCALYQCQMHKAVNNMESLVRQNPTLYLTEGLVFNLCTLYELGSDTADSGRKKRVLQSIAKRFFLHDIGPESFRIT 516          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: A0A6G0XXV0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXV0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.440e-21
Identity = 76/261 (29.12%), Postives = 124/261 (47.51%), Query Frame = 0
Query:   40 EAIAWRRRVMSSLVNTFVGRGNWRLALGLLEDLGKERCSASSGDTSSLGRSPPESSAPGRGEAQPPQTAEATDDALRVEALSRIGRVFLQFGSLRDAEIYFRRAEEAAAAEGAREDHP----RVLVNRGLLHFSNNEFVAAQENFRNAATAXXXXXXXXPDTDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRM 296
            EA  W + V  ++VN+FV R  + LAL L + L   +                                +  D   R+  LSR+GR+ LQ G  + AE  F  AE A   +    + P    R+L+N+GLL F+ N+F  A + F                +++ +   + D G  ++  A NN+S+  +YSC+V   V  LE +++ DPR ++   ++FNL TLYDL  D   S  +K  ++ +++ + +E IDA+SFR+
Sbjct:  453 EAAIWHQIVGVNMVNSFVERKKFDLALRLAKSLYNVK-------------------------------RDDVDLRQRIVLLSRLGRINLQMGDFKGAEAIF--AEAAWVNQHIAANEPDCAARILLNQGLLAFAQNKFKEALDAFNTILGVYSGEEAINGSSNEPF--ESWDDG-DVISCAANNMSICALYSCEVQTAVNVLETILQADPRRHLHSSIVFNLSTLYDLVCDNANSTSRKEMIKRLSEAYGIEHIDATSFRI 677          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: B8C9M0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9M0_THAPS)

HSP 1 Score: 99.8 bits (247), Expect = 1.100e-19
Identity = 87/286 (30.42%), Postives = 131/286 (45.80%), Query Frame = 0
Query:   44 WRRRVMSSLVNTFVGRGNWRLALGLLEDL--GKERCSASSGDTSSLGRSPPESSAPGRGEAQPPQTAEATDDALRVEALSRIGRVFLQFGSLRDAEI-------YFRRAEEAAAAEGA---------------REDHPRVLVNRGLLHFSNNEFVAAQENFRNA--------ATAXXXXXXXXPDTDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS 297
            WR  + ++LVN FV +  WRLAL  LE+L  G E       +      +  E        A+     E    +  VE LSR   + LQ G+L  A I       +  R  E  +++                 R+   R LVN GLL F+   +  A + FR+A        A++           +        D  + L   +LNNLSL ++YS ++   V+ LEGL+R+DP LY+ + + FN+CTLY+L  D     ++K+ LQ VA+RF L D+   SFR++
Sbjct:  595 WRPTIDNALVNAFVRKREWRLALNSLENLLNGLEESVVREVEWWCRSNTVVE--------AERSLMKELILSSASVELLSRQILILLQSGALAAAHIVQSDVNSHSTRVREITSSQSTTQTTLAFLQKESTLVRQVPIRQLVNEGLLLFACANYSDATKCFRDALYKQKELGASSEIRPSGCPSFKELASPTLGFDADSSLTVESLNNLSLCLLYSGNMRLAVQELEGLVREDPTLYLTEGMAFNMCTLYELGSDGEECTRRKKILQRVAKRFFLHDVGVESFRLN 872          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: L8H1C1_ACACA (Tetratricopeptide repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1C1_ACACA)

HSP 1 Score: 87.8 bits (216), Expect = 1.040e-15
Identity = 60/180 (33.33%), Postives = 92/180 (51.11%), Query Frame = 0
Query:  117 VEALSRIGRVFLQFGSLRDAEIYFRRAEEAAAAEGAREDHPRVLVNRGLLHFSNNEFVAAQENFRNAATAXXXXXXXXPDTDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRM 296
            V  LS +GR+ LQ+G+L  AE YFR  E+         +   V++NRG+      E++  ++ + +AA A        PD     +WA             NN ++  +Y  D+ R + +LE LI  +P   +LDVV+FNLCTLYDL  D+  S  KK+ L A+  +F  +D D S  ++
Sbjct:  450 VVLLSAVGRLLLQWGNLTGAERYFRDVEQLVTEPT---NSVVVMMNRGM------EYIG-RDRYSDAARAFERVLELEPDN----VWAA------------NNRAVCWLYLRDLQRSITSLEQLIAANPEANLLDVVVFNLCTLYDLESDS--SGVKKKALLAIISQFASDDFDTSGIKV 601          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: A0A6P7LP67_BETSP (trafficking protein particle complex subunit 12 isoform X1 n=2 Tax=Betta splendens TaxID=158456 RepID=A0A6P7LP67_BETSP)

HSP 1 Score: 82.4 bits (202), Expect = 7.850e-14
Identity = 53/167 (31.74%), Postives = 84/167 (50.30%), Query Frame = 0
Query:  116 RVEALSRIGRVFLQFGSLRDAEIYFRRAEEAAAAEGAREDHPR-VLVNRGLLHFSNNEFVAAQENFRNAATAXXXXXXXXPDTDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVA 281
            RV+ LS IGR+FLQ G ++ AE YF+  E A   E ++  H   +L+NR  +H S N +  A  +F +                                 A NN ++ ++Y   +   +  LEGL++KDP LY+ + V+FNL T+Y+L   + ++ KK+  L+AVA
Sbjct:  689 RVQLLSGIGRIFLQIGDIKTAERYFQEVERACQMEESQPCHTVCLLMNRAFVHLSQNNYAEAHASFIDVLKIDPKNPV-----------------------ANNNAAVCLLYLGHLKESLGQLEGLVQKDPALYLHESVLFNLTTMYELE-SSRSTQKKQALLEAVA 831          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: A0A3B3QHX2_9TELE (Trafficking protein particle complex 12 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QHX2_9TELE)

HSP 1 Score: 80.9 bits (198), Expect = 2.500e-13
Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 0
Query:  116 RVEALSRIGRVFLQFGSLRDAEIYFRRAEEAAAAEG-AREDHPRVLVNRGLLHFSNNEFVAAQENFRNAATAXXXXXXXXPDTDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQR 283
            + + LS IGR+FLQ G ++ AE YF+  E+A  A+G  +     VL+NR  +H S N +  A  +F                                   A NN ++ ++Y   +   +  LEGL+++DP LY+ + V+FNL T+Y+L   + ++ KK+  L+AVA R
Sbjct:  613 KAQLLSGIGRIFLQIGDIKTAEKYFQEVEKACQAKGDGQNPDTYVLMNRAFVHLSQNSYSEAHVSFSEVLKIDPKNPV-----------------------ANNNAAVCLLYLGRLKESLGQLEGLVQRDPTLYLHESVLFNLTTMYELE-SSRSTQKKQALLEAVACR 757          
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Match: A0A8C6VTU8_NOTFU (Trafficking protein particle complex 12 n=13 Tax=Nothobranchiidae TaxID=405002 RepID=A0A8C6VTU8_NOTFU)

HSP 1 Score: 77.4 bits (189), Expect = 3.680e-12
Identity = 52/169 (30.77%), Postives = 86/169 (50.89%), Query Frame = 0
Query:  116 RVEALSRIGRVFLQFGSLRDAEIYFRRAEEAAAAEGAREDHPR-VLVNRGLLHFSNNEFVAAQENFRNAATAXXXXXXXXPDTDDGWLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQR 283
            RV+ LS IGR+FLQ G ++ AE+YF+  E++   +     H   VL+NR  ++ S N +  A  +F              P T+                   NN ++ ++Y   +   +  LEGL+++DP LY+ + V+FNL T+Y+L   + ++ KK+  L+AVA R
Sbjct:  646 RVQLLSGIGRIFLQVGDVKMAEVYFQDVEKSCQMKARDPTHTTCVLMNRAFVYLSQNSYAEAHASFLEVLKIDPRH----PVTN-------------------NNAAVCLLYLGRLKESLGQLEGLVQQDPALYLHESVLFNLTTMYELE-SSRSTQKKQALLEAVACR 790          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6134.14700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JWF7_9PHAE1.340e-10972.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLE2_ECTSI1.190e-9581.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFR3_9PHAE6.050e-4787.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2U556_9STRA3.570e-2730.00Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A6G0XXV0_9STRA1.440e-2129.12Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
B8C9M0_THAPS1.100e-1930.42Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
L8H1C1_ACACA1.040e-1533.33Tetratricopeptide repeat domain containing protein... [more]
A0A6P7LP67_BETSP7.850e-1431.74trafficking protein particle complex subunit 12 is... [more]
A0A3B3QHX2_9TELE2.500e-1330.77Trafficking protein particle complex 12 n=2 Tax=Pa... [more]
A0A8C6VTU8_NOTFU3.680e-1230.77Trafficking protein particle complex 12 n=13 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 104..228
e-value: 2.4E-8
score: 35.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 113..186
NoneNo IPR availablePANTHERPTHR21581D-ALANYL-D-ALANINE CARBOXYPEPTIDASEcoord: 44..296
NoneNo IPR availablePANTHERPTHR21581:SF6TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 12coord: 44..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6134contigL-elsbetiae_contig6134:4931..11297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6134.14700.1mRNA_L-elsbetiae_contig6134.14700.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6134 4931..11297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6134.14700.1 ID=prot_L-elsbetiae_contig6134.14700.1|Name=mRNA_L-elsbetiae_contig6134.14700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp
ELEGVIASSSSPAGISDVGADAEEAAAQTMSPELTLTVAEAIAWRRRVMS
SLVNTFVGRGNWRLALGLLEDLGKERCSASSGDTSSLGRSPPESSAPGRG
EAQPPQTAEATDDALRVEALSRIGRVFLQFGSLRDAEIYFRRAEEAAAAE
GAREDHPRVLVNRGLLHFSNNEFVAAQENFRNAATAAAAAKEEPPDTDDG
WLWATLDQGAGLLDSALNNLSLAMVYSCDVMRGVETLEGLIRKDPRLYML
DVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf