prot_L-elsbetiae_contig6133.14698.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6133.14698.1
Unique Nameprot_L-elsbetiae_contig6133.14698.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length543
Homology
BLAST of mRNA_L-elsbetiae_contig6133.14698.1 vs. uniprot
Match: D7FTF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF4_ECTSI)

HSP 1 Score: 692 bits (1787), Expect = 1.750e-245
Identity = 409/538 (76.02%), Postives = 451/538 (83.83%), Query Frame = 0
Query:    1 MQGGRLSSVGKKVNALVQEQLQYCRSLRRADMLSNMQNVATDEECLKQANSLIMLLKADVRALNACAARLLTPSEAEGVTETPTSEVALSGYSVETIXXXXXXXXXXXXXXXXXXXXXXQAVSATNQLLIIRERLQAGLSARLLELKTEMDKEFGTAFVDMESYLRTEKDTQAKSDAEHCSACARYFVELCYKFQVMVHACRGLRAAKEGLNQTVLLKALREERDSLADRLGDCETDLKKIHHSYTEMMNPDMAVGLENRQRHKIEEQEADLSRLKSEIGSLRRDHDRLLAENGRFSDAVGELQSQLQSNKDQYGRELAWLNPKVATAENRALEIERLVDQMNLQLSLLSSSNRKASEDIADLKAQLSLAKADGPGAKLSHLQGQAAECRSTIRKLQGDISRKDRLVTVAMSARAEVQTAYQDMKQNTADLERRFRETQGARLLNEKQKEDVMRRLGLAEGSLAAAEGREAQTAEELRKTQEDLAIKAEENQILQDRLDNQEMDLRDYENLQKKFKELALKNKDLVYRGATTSGLLEV 538
            M GG  +  GKKV+ALVQEQLQYCRSLRRADMLS +QNVATDEECLKQANSLIMLLKADVR LNACAARLL PSEA  VT++ TSEV  S Y+VETI  XXXXXXXXXXXXXXXXX   QAVSATNQLL+IRERLQAGLS+RLLELKT+MDKEFGTAFVDMESYLR EKDTQAKSDAEHCSACARYFVELCYKFQVMVHACRGLRAAKEGLNQTVLLKALREERDSLA RLGDCE DLK+IHHSYTEMMNPDMAVGLENRQRHKIEEQ+ADLSRL++EI SL+RDH+RLLAENGR SDAVGELQSQ QSNK+Q+ RELAWL PKVA AE+RA+EIE LVDQMNL+LSLLS+S+RKASE++ADLK QLSLAKADGPGAKLS LQG+AAECR+ IRKL+G                                          AR+L EKQ++DV RRL   +GSLA+AE RE +TAE+LR+TQEDLA+KAEEN I+Q+RLDNQEM+LRDY NLQK+F  L+LKNKDLVYR AT +GLLEV
Sbjct:    2 MTGGGAAG-GKKVSALVQEQLQYCRSLRRADMLSAVQNVATDEECLKQANSLIMLLKADVRVLNACAARLLLPSEAAIVTDSATSEVPRSAYNVETIERXXXXXXXXXXXXXXXXXI--QAVSATNQLLLIRERLQAGLSSRLLELKTKMDKEFGTAFVDMESYLRMEKDTQAKSDAEHCSACARYFVELCYKFQVMVHACRGLRAAKEGLNQTVLLKALREERDSLAKRLGDCEADLKRIHHSYTEMMNPDMAVGLENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSQAQSNKEQHARELAWLTPKVAAAESRAVEIEGLVDQMNLKLSLLSASHRKASEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKG------------------------------------------ARILCEKQRDDVARRLEGVQGSLASAEQRELETAEQLRQTQEDLALKAEENGIMQERLDNQEMELRDYSNLQKEFNTLSLKNKDLVYRVATVNGLLEV 494          
BLAST of mRNA_L-elsbetiae_contig6133.14698.1 vs. uniprot
Match: A0A6H5JEQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ6_9PHAE)

HSP 1 Score: 614 bits (1584), Expect = 1.600e-214
Identity = 374/540 (69.26%), Postives = 417/540 (77.22%), Query Frame = 0
Query:   38 NVATDEECLKQANSLIMLLKADVRALNACAARLLTPSEAEGVTETPTSEVAL-------------------SGYSVETIXXXXXXXXXXXXXXXXXXXXXXQAVSATNQLLIIRERLQAGLSARLLELKTEMDKEFGTAFVDMESYLRTEK--------------------DTQAKSDAEHCSACARYFVELCYKFQVMVHACRGLRAAKEGLNQTVLLKALREERDSLADRLGDCETDLKKIHHSYTEMMNPDMAVGLENRQRHKIEEQEADLSRLKSEIGSLRRDHDRLLAENGRFSDAVGELQSQLQSNKDQYGRELAWLNPKVATAENRALEIERLVDQMNLQLSLLSSSNRKASEDIADLKAQLSLAKADGPGAKLSHLQGQAAECRSTIRKLQGDISRKDRLVTVAMSARAEVQTAYQDMKQNTADLERRFRETQGARLLNEKQKEDVMRRLGLAEGSLAAAEGREAQTAEELRKTQEDLAIKAEENQILQDRLDNQEMDLRDYENLQKKFKELALKNKDLVYRGATTSGLLEV 538
            NVATDEECLKQANSLIMLLKADVR LNACAARLL PS+A  VT++ T+E+                     S YSVETIXXXXXXXXXXXXXXXXX     QAVSATNQLL+IRERLQAGLS+RLLELKTEMDKEFGTAFVDMESYLR EK                    DTQAKSDAEHCS C RYFVELCYKFQVMVHACRGLRAAKEGLNQTVLLK LREERDSLA RLGDCET+LK+IHHSYTEMMNPDMAVGLENRQRHKIEEQ+ADLSRL++EI SL+RDH+RLLAENGR SDAVGELQS  QSNK+Q+ RELAWL PKVA AE+RA+EIE LVDQMNL+LSLLS+S+RKASE++ADLK QLSLAKADGPGAKLS LQG+AAECR+ IRKL+G                                          AR+L EKQ++DV RRL +A+GSL +AE RE +TAE+LR+TQEDLA KAEEN I+Q+RLDNQEM+LRDY NL+K+F  L+LKNKDL+YR AT +GLLEV
Sbjct:    8 NVATDEECLKQANSLIMLLKADVRVLNACAARLLLPSDAAIVTDSATNEIPRRSHSGDGHLKDTTTFPHENSAYSVETIXXXXXXXXXXXXXXXXXSSL--QAVSATNQLLLIRERLQAGLSSRLLELKTEMDKEFGTAFVDMESYLRMEKAKKTVPNERPFVTYSSRPMQDTQAKSDAEHCSTCTRYFVELCYKFQVMVHACRGLRAAKEGLNQTVLLKVLREERDSLAKRLGDCETELKRIHHSYTEMMNPDMAVGLENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSHAQSNKEQHARELAWLTPKVAAAESRAVEIEGLVDQMNLKLSLLSASHRKASEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKG------------------------------------------ARILCEKQRDDVARRLEVAQGSLTSAEQRELETAEQLRQTQEDLASKAEENGIMQERLDNQEMELRDYSNLRKEFNTLSLKNKDLMYRVATVNGLLEV 503          
BLAST of mRNA_L-elsbetiae_contig6133.14698.1 vs. uniprot
Match: A0A836CM21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM21_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.080e-39
Identity = 123/406 (30.30%), Postives = 202/406 (49.75%), Query Frame = 0
Query:    5 RLSSVGKKVNALVQEQLQYCRSLRRADMLSNMQNVATDEECLKQANSLIMLLKADVRALNACAARL--------LTP------------SEAEGVTETPTSEVALSGYSVETIXXXXXXXXXXXXXXXXXXXXXXQAVSATNQLLIIRERLQAGLSARLLELKTEMDKEFGTAFVDMESYLRTEKDT-QAKSDAEHCSACARYFVELCYK------------------------FQVMVHACRGLRAAKEGLNQTVLLKALREERDSLADRLGDCETDLKKIHHSYTEMMNPDMAVGLENRQRHKIEEQEADLSRLKSEIGSLRRDHDRLLAENGRFSDAVGELQSQLQSNKDQYGRELAWLNPKVATAENRALEIERLVDQMNLQLSLLSSSNRKASEDIADLKA 365
            RL S  + +  L +EQL+   S + AD  +N       +E   +AN LI+ LK+DVR L+   +RL        L P            ++A+ +  +  +E  +   ++E +                       A+    +L  +R  L A L  RL   K ++D++FG +F+DM+++LR E+D   A SDA  C      FV++ ++                        FQ++ HA  GLRA +EGL+  VLLK  R ER +LA++L   + +L++IHH+Y EM+ P+ + GL NRQR  IEE  A    ++ E GSL+   D+  A+ GR SD + + Q  +++   ++GRELA L  +V +   RA ++E L  Q    +++L S+NR+ + ++  L+A
Sbjct:    4 RLESTERNLAQLAREQLK-ASSFKLADSSAN--GSQYHDEIAGKANKLILQLKSDVRTLSKYVSRLPATDKAAVLVPDHMRLRVHADVAAQAQAMEMSKAAEAVVGVVALEKLLEQVPLVPTAAAEDAREAALAA-ALDTVARLDELRGGLMAALERRLAAAKQQLDRDFGASFLDMQAFLRAEQDVLAAASDARTCGQGTIAFVQVTHQLTRRLAMIAKAPLYAPADPLPHNEFQLLAHAAHGLRAVREGLSHAVLLKQARAERQALAEQLAGAQAELRRIHHTYAEMLTPETSKGLANRQRIAIEELTAQAKAIRDENGSLKLQLDKSTAQQGRVSDLLADAQMAVEAQGARHGRELARLKTQVESMRARAEQLESLAAQSQTHIAMLHSANRRQAAELERLRA 405          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6133.14698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTF4_ECTSI1.750e-24576.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEQ6_9PHAE1.600e-21469.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CM21_9STRA1.080e-3930.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 414..434
NoneNo IPR availableCOILSCoilCoilcoord: 325..373
NoneNo IPR availableCOILSCoilCoilcoord: 217..237
NoneNo IPR availableCOILSCoilCoilcoord: 463..518
NoneNo IPR availableCOILSCoilCoilcoord: 258..292
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 252..507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6133contigL-elsbetiae_contig6133:654..10683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6133.14698.1mRNA_L-elsbetiae_contig6133.14698.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6133 654..10683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6133.14698.1 ID=prot_L-elsbetiae_contig6133.14698.1|Name=mRNA_L-elsbetiae_contig6133.14698.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=543bp
MQGGRLSSVGKKVNALVQEQLQYCRSLRRADMLSNMQNVATDEECLKQAN
SLIMLLKADVRALNACAARLLTPSEAEGVTETPTSEVALSGYSVETIERL
FRRFRQVDTTDTSSSGSSIQAVSATNQLLIIRERLQAGLSARLLELKTEM
DKEFGTAFVDMESYLRTEKDTQAKSDAEHCSACARYFVELCYKFQVMVHA
CRGLRAAKEGLNQTVLLKALREERDSLADRLGDCETDLKKIHHSYTEMMN
PDMAVGLENRQRHKIEEQEADLSRLKSEIGSLRRDHDRLLAENGRFSDAV
GELQSQLQSNKDQYGRELAWLNPKVATAENRALEIERLVDQMNLQLSLLS
SSNRKASEDIADLKAQLSLAKADGPGAKLSHLQGQAAECRSTIRKLQGDI
SRKDRLVTVAMSARAEVQTAYQDMKQNTADLERRFRETQGARLLNEKQKE
DVMRRLGLAEGSLAAAEGREAQTAEELRKTQEDLAIKAEENQILQDRLDN
QEMDLRDYENLQKKFKELALKNKDLVYRGATTSGLLEVSWFT*
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