prot_L-elsbetiae_contig6100.14648.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6100.14648.1
Unique Name	prot_L-elsbetiae_contig6100.14648.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	118

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig6100.14648.1 vs. uniprot
Match: D8LES9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES9_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 7.670e-33
Identity = 72/125 (57.60%), Postives = 83/125 (66.40%), Query Frame = 0

Query:    1 IFGLGSVFLGFQYHASRWGSMTSSLFGLGITLAVWFPFLVTITLVIFNARHGNIGGG--PLQIPGEPT----QKQINSVAAMGIFXXXXXXXXXXXXXXXXX-KMYRFFEGAASIYTATYYRNRL 118
            +FGL S+FLGFQY ASRWGS  +SLFGLGITLA WFPFL T+ L+ F A HGN+GGG  PLQI   PT    Q +INS+A MGI                   KMYRFF+G AS Y+ATYYR+RL
Sbjct:   74 LFGLVSMFLGFQYVASRWGSKVTSLFGLGITLAAWFPFLTTVALIAFQADHGNVGGGAGPLQIL-HPTISVSQGEINSIALMGILGFWGYAGTVIGALTFLQWKMYRFFQGGASTYSATYYRSRL 197

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6100.14648.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6100.14648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LES9_ECTSI	7.670e-33	57.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 95..118
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 69..94
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 50..68
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 25..49
None	No IPR available	TMHMM	TMhelix		coord: 25..47
None	No IPR available	TMHMM	TMhelix		coord: 72..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6100	contig	L-elsbetiae_contig6100:7462..9283 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6100.14648.1	mRNA_L-elsbetiae_contig6100.14648.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6100 7462..9283 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6100.14648.1 ID=prot_L-elsbetiae_contig6100.14648.1|Name=mRNA_L-elsbetiae_contig6100.14648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp
IFGLGSVFLGFQYHASRWGSMTSSLFGLGITLAVWFPFLVTITLVIFNAR
HGNIGGGPLQIPGEPTQKQINSVAAMGIFGFYGYAGVVSSLTFLQFKMYR
FFEGAASIYTATYYRNRL