prot_L-elsbetiae_contig6032.14571.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6032.14571.1
Unique Nameprot_L-elsbetiae_contig6032.14571.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length391
Homology
BLAST of mRNA_L-elsbetiae_contig6032.14571.1 vs. uniprot
Match: D7FVA4_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA4_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 8.400e-89
Identity = 157/272 (57.72%), Postives = 200/272 (73.53%), Query Frame = 0
Query:   19 NEVGTGQAGNGAGGDVWANRDVELIVTDSSFSGAAAEAGGASIVCCGANIVNSNFSSTDVFSLERHFG-AVQVGGPDEEACDRPLVVTGSTFSGCSVASASGEGGSLAIFDTTATLTDCVFEGSVETALLFESSSASGEHQLEMASCLFNQNTAPAEAYASVASQGAVLVVTNTGISEGDV-VFMGKCFDMFCFDNEPYECEFVYDGAEIVHEGEFKCHLCDIDGVQQASGTDDDLVGTTGRSVDTDSSDDDDWILIGLSIAVALLALVVVG 288
            NEVGTG A +GAGGDV+A  +V+L VT ++FS +AAE GGA+I CCGA I ++ F+  D          A+ V  PD++ C R L ++ STFSGC+V S +G GGS+AIFDT+AT+TDC FE SV TA+LF SSS SGEHQL M    FN NT PAEAYA+   QGA +VVTNTG+++G+  V MG+  DM+CF NEPYECEFVYD ++IVH GEFKC +CDI+G +Q SGTDDDL+  + RS+D DSS D+  I+IGLS+A+ L  LVV+G
Sbjct:  188 NEVGTGVAADGAGGDVYAGTNVDLTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTXXXXXXXXXALLVNRPDQDGCPRELDLSNSTFSGCTVGSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTFPAEAYATDTEQGAAIVVTNTGVADGETTVTMGEFNDMYCFANEPYECEFVYDQSDIVHSGEFKCQICDIEGERQQSGTDDDLIDASERSIDGDSSSDNQGIVIGLSLALGL-TLVVIG 458          
BLAST of mRNA_L-elsbetiae_contig6032.14571.1 vs. uniprot
Match: D7FV99_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV99_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 1.120e-85
Identity = 158/293 (53.92%), Postives = 199/293 (67.92%), Query Frame = 0
Query:   19 NEVGTGQAGNGAGGDVWANRDVELIVTDSSFSGAAAEAGGASIVCCGANIVNSNFSSTDVFSLERHFG-AVQVGGPDEEACDRPLVVTGSTFSGCSVASASGEGGSLAIFDTTATLTDCVFEGSVETALLFESSSASGEHQLEMASCLFNQNTAPAEAYASVASQGAVLVVTNTGISEGDV-VFMGKCFDMFCFDNEPYECEFVYDGAEIVHEGEFKCHLCDIDGVQQASGTDDDLVGTTGRSVDTDSSDDDDWILIGLSIAVALLALVVVGGFTARRCKSGTRSAGATQAQP 309
            NEVGTG   +GAGGDV+   +VEL VT ++FS + AE GGA+I CCGA I N  F              A+ V  PD++ C R L ++ STFSGC+V S +G GGS+AIFDT+AT+TDC FE SV TA+LF SSS SGEHQL M    FN NT PAEAY +   QGA +VVTNTG+++G+  V MG+  D++CF NEPYECEFVYD ++IVH GEFKC +CDIDGVQQ SGTD DL G+  +S  ++S D  D+I+IGLS A+AL  ++ +G   AR  K   R+   TQ  P
Sbjct:  188 NEVGTGVDADGAGGDVYVGTNVELTVTGTTFSTSVAEYGGAAIECCGAVISNCTFXXXXXXXXXXXXXXALLVNRPDQDPCPRDLDLSDSTFSGCTVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMNYVQFNLNTLPAEAYVTDTEQGAAIVVTNTGVADGETTVTMGEFDDIYCFANEPYECEFVYDQSDIVHNGEFKCQICDIDGVQQVSGTDGDLTGSIDQSSSSNSWDSKDYIIIGLSAALALCIILAIGFLVARAYKK-HRAPSETQPPP 479          
BLAST of mRNA_L-elsbetiae_contig6032.14571.1 vs. uniprot
Match: D7FVA0_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA0_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 3.910e-71
Identity = 151/307 (49.19%), Postives = 187/307 (60.91%), Query Frame = 0
Query:    1 MYVGGSETLTITSSVFSRNEVGTGQAGNGAGGDVWANRDVELIVTDSSFSGAAAE-AGGASIVCCGANIVNSNFSSTDVFSLERHFGAVQVGGPDEEACDRPLVVTGSTFSGCSVASASGEGGSLAIFDTTATLTDCVFEGSVETALLFESSSASGEHQLEMASCLFNQNTAPAEAYASVASQGAVLVVTNTGISEGDV-VFMGKCFDMFCFDNEPYECEFVYDGAEIVHEGEFKCHLCDIDGV-QQASGTDDDLVGTTGRS--------------------VDTDSS----DDDDWILIGLSIAVA 280
            +Y  GSETLTIT S+F+ NEVGTG    GAGGDV+A  +VEL VT ++FS +AAE                                 + V  PD++AC R L ++ + FSGCSV S +G GGS+AIFDT+AT+TDC FE SV TA+LF SSS SGEHQL M    FN NT PAEAYA+   QGA +VVTNTG+ EG+  V MG+  DM+CF N+PYECEFVYD ++IVH GEF C LC IDGV Q+ SGTDDD V   G++                    +D  SS    +  D+++IGLS AVA
Sbjct:  135 VYAIGSETLTITDSLFTVNEVGTGVEEGGAGGDVYAGINVELTVTGTTFSTSAAEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVNRPDQDACSRELDLSDTIFSGCSVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTLPAEAYATDTEQGAAIVVTNTGVEEGNTTVVMGEFNDMYCFGNDPYECEFVYDQSDIVHSGEFNCQLCVIDGVRQEVSGTDDDSVEGIGQTSSSTSVQEGXXXXXXXXTGKIDQSSSSGSWESKDYVIIGLSAAVA 441          
BLAST of mRNA_L-elsbetiae_contig6032.14571.1 vs. uniprot
Match: A0A6H5L0R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R7_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.940e-15
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    1 MYVGGSETLTITSSVFSRNEVGTGQAGNGAGGDVWANRDVELIVTDSSFSGAAAEAGGASIVCCGANIVNSNFSSTDVFS 80
            +Y  GSETLTIT S+F  NEVGTG   +GAGGDV+A  +VEL VT ++FS +AAE GGA+I CCGA I ++ F+  D  S
Sbjct:   41 VYAIGSETLTITDSLFRGNEVGTGVDADGAGGDVYAGTNVELTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTAS 120          
BLAST of mRNA_L-elsbetiae_contig6032.14571.1 vs. uniprot
Match: A0A6H5L8Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q9_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 7.650e-8
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0
Query:   19 NEVGTGQAGNGAGGDVWANRDVELIVTDSSFSGAAAEAGGASIVCCGANIVNSNFSSTDVFS 80
            NEVGTG   +GAGGDV+A  +VEL VT ++FS +AAE GGA+I CCGA I ++ F+  D  S
Sbjct:  186 NEVGTGVDADGAGGDVYAGTNVELTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTAS 247          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6032.14571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVA4_ECTSI8.400e-8957.72Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
D7FV99_ECTSI1.120e-8553.92Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FVA0_ECTSI3.910e-7149.19Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5L0R7_9PHAE3.940e-1557.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8Q9_9PHAE7.650e-856.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..269
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 293..390
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..292
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 2..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6032contigL-elsbetiae_contig6032:7967..10745 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6032.14571.1mRNA_L-elsbetiae_contig6032.14571.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6032 7093..10827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6032.14571.1 ID=prot_L-elsbetiae_contig6032.14571.1|Name=mRNA_L-elsbetiae_contig6032.14571.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=391bp
MYVGGSETLTITSSVFSRNEVGTGQAGNGAGGDVWANRDVELIVTDSSFS
GAAAEAGGASIVCCGANIVNSNFSSTDVFSLERHFGAVQVGGPDEEACDR
PLVVTGSTFSGCSVASASGEGGSLAIFDTTATLTDCVFEGSVETALLFES
SSASGEHQLEMASCLFNQNTAPAEAYASVASQGAVLVVTNTGISEGDVVF
MGKCFDMFCFDNEPYECEFVYDGAEIVHEGEFKCHLCDIDGVQQASGTDD
DLVGTTGRSVDTDSSDDDDWILIGLSIAVALLALVVVGGFTARRCKSGTR
SAGATQAQPAQAAASAPAATAPPAAASAPAATAPPAAASVRAATAPPAAA
SVPATTAPPAAASVPATTTPPATAGVPATTGTVVEPAVEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence