prot_L-elsbetiae_contig601.14540.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig601.14540.1
Unique Nameprot_L-elsbetiae_contig601.14540.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length354
Homology
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BLAST of mRNA_L-elsbetiae_contig601.14540.1 vs. uniprot
Match: A0A6H5L6Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y9_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 1.150e-121
Identity = 217/378 (57.41%), Postives = 253/378 (66.93%), Query Frame = 0 
Query:    1 MNNNGLSPRAG---HRRSRSATNREELCSAS---TFGSKESITPTPSAQHGRFFNDP------VVPSRA--SILPS-LGSTSPSPSSCKKGHPKQQPLMKQFTTFRLVALMATALAALLCTRARVASPTSRTSLRAAAVE-AQQDRCAGRIEKRRGLGVPRGRQLCAAVLPSSIV--------ESG--SSSWFVSAHVDRAPSAIEPMKRLRGTIAPERSLPHQYYVRAMEASLHSIATVDPEAEVDIVVFSEGQWGGMVDEMGVPVEWDMPSDVCDELGLHCTQTVVLLNEETSPSVADTLECIAASDVLVASESKFSRAAAVLASHVKVLTDRWEMDEDELMVALNPATTIAGMPASERQVLRKLVSDYHECSPSS 352
            M  NGLSPR     HRRSRSATN+EE+ SAS      + +S TP PSA HGRFF+DP      V P+R   S LPS   ++SPSPS CK GHPKQQ                                           E AQQ+RCA RIE+RRGLGVP  R+ CA VLP S +        E G  S SW VS HVDRAPS+++  KRLRG +   RSLPHQYYVRAMEASLHSIA  +P A VD+ +FSEGQWGGMVDEMG+P+ WD+  + CD+LGLHCTQ VVLLNE T+P  + +L+CIAASD+ +ASESKFSRA AVL+ HVKVLTDRWEMDE+E+MVALNPATTIAGMP S+RQ+LR LV+DYHECS SS
Sbjct:    2 MTPNGLSPRVTKGQHRRSRSATNKEEIFSASGXXXXSNTKSATPGPSASHGRFFHDPAAAGAAVAPARPAPSTLPSDFAASSPSPS-CK-GHPKQQKKSXXXIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAQQNRCAERIERRRGLGVPPDREQCAGVLPDSFMMQHGGGGAEDGRDSESWLVSVHVDRAPSSVDLSKRLRGAVPLHRSLPHQYYVRAMEASLHSIAVAEPGAHVDVAIFSEGQWGGMVDEMGLPLYWDVAGETCDDLGLHCTQHVVLLNERTAPESSQSLDCIAASDLFIASESKFSRAGAVLSDHVKVLTDRWEMDEEEMMVALNPATTIAGMPDSQRQLLRTLVADYHECSSSS 377
[Close]
BLAST of mRNA_L-elsbetiae_contig601.14540.1 vs. uniprot
Match: D7FHD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD0_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 2.350e-108
Identity = 174/272 (63.97%), Postives = 202/272 (74.26%), Query Frame = 0 
Query:   95 LMATALAALLCTRARVASPTSRTSLRAAAV----EAQQDRCAGRIEKRRGLGVPRGRQLCAAVLPSSIV--------ESG--SSSWFVSAHVDRAPSAIEPMKRLRGTIAPERSLPHQYYVRAMEASLHSIATVDPEAEVDIVVFSEGQWGGMVDEMGVPVEWDMPSDVCDELGLHCTQTVVLLNEETSPSVADTLECIAASDVLVASESKFSRAAAVLASHVKVLTDRWEMDEDELMVALNPATTIAGMPASERQVLRKLVSDYHECSPSS 352
            +MATA A LLCTRA                    EAQQ+RCA RIE+RRGLGVP  R+ CA VLP S +        E G  S SW VS HVDRAPS+++  KRLRG     RSLPHQYYVRAMEASLHSIA  +P A VD+ +FSEGQWGGMVDEMG+P+ WD+  + CD+LGLHC+Q VVLLNE T+P  + +LECIAASD+ +ASESKFSRA AVL+ HVKVLTDRWEMDE+E+MVALNPATTIAGMP S+RQ+LR LV+DYHECS SS
Sbjct:    1 MMATASAVLLCTRAXXXXXXXXXXXXXXXXXXGKEAQQNRCAERIERRRGLGVPPDREQCAGVLPDSFMMQHGGGGGEDGRDSESWLVSVHVDRAPSSVDLSKRLRGAAPLHRSLPHQYYVRAMEASLHSIAVAEPGAHVDVAIFSEGQWGGMVDEMGLPLYWDVAGETCDDLGLHCSQHVVLLNERTAPESSQSLECIAASDLFIASESKFSRAGAVLSDHVKVLTDRWEMDEEEMMVALNPATTIAGMPDSQRQLLRTLVADYHECSASS 272
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig601.14540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6Y9_9PHAE1.150e-12157.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHD0_ECTSI2.350e-10863.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..353
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig601contigL-elsbetiae_contig601:27882..30280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig601.14540.1mRNA_L-elsbetiae_contig601.14540.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig601 26735..30411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig601.14540.1 ID=prot_L-elsbetiae_contig601.14540.1|Name=mRNA_L-elsbetiae_contig601.14540.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=354bp
MNNNGLSPRAGHRRSRSATNREELCSASTFGSKESITPTPSAQHGRFFND
PVVPSRASILPSLGSTSPSPSSCKKGHPKQQPLMKQFTTFRLVALMATAL
AALLCTRARVASPTSRTSLRAAAVEAQQDRCAGRIEKRRGLGVPRGRQLC
AAVLPSSIVESGSSSWFVSAHVDRAPSAIEPMKRLRGTIAPERSLPHQYY
VRAMEASLHSIATVDPEAEVDIVVFSEGQWGGMVDEMGVPVEWDMPSDVC
DELGLHCTQTVVLLNEETSPSVADTLECIAASDVLVASESKFSRAAAVLA
SHVKVLTDRWEMDEDELMVALNPATTIAGMPASERQVLRKLVSDYHECSP
SSP*
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