prot_L-elsbetiae_contig6008.14536.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6008.14536.1
Unique Nameprot_L-elsbetiae_contig6008.14536.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length172
Homology
BLAST of mRNA_L-elsbetiae_contig6008.14536.1 vs. uniprot
Match: D8LEX3_ECTSI (PRA1 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX3_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 5.650e-101
Identity = 148/171 (86.55%), Postives = 160/171 (93.57%), Query Frame = 0
Query:    1 MRGWGDFFARFKAPRAWNTTVLDERLTTNFLHYRGNYSVVAAGLLIVGIVSNPYVLLALICCALLLTFLFPTGEPPRRTVSVGERVLERQERLAGAVIGVSCILGLTGAWYILLFYGGAGVVLCLLHGVFRPRSMGSKASRASAEARAGFTIENAQNFVENVFGMNNSRSQ 171
            M+GWG+FFARFKAPRAWNT VLDERLTTNFLHYRGNYSVVAAGLL+VGI+SNPYVLLAL+CCALLLTFLFPTGEP RR V VG+R LERQERLA AVIG SCILGLTGAWYILLFYGGAGV+LCLLHGVFRPRS+GSK SRA+AEA+AGFTIENAQNF EN+FG+  SRSQ
Sbjct:   56 MKGWGEFFARFKAPRAWNTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEP-RRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQAGFTIENAQNFAENIFGITGSRSQ 225          
BLAST of mRNA_L-elsbetiae_contig6008.14536.1 vs. uniprot
Match: A0A835Z7M0_9STRA (PRA1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.380e-33
Identity = 73/148 (49.32%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    1 MRGWGDFFARFKAPRAWNTTVLDERLTTNFLHYRGNYSVVAAGLLIVGIVSNPYVLLALICCALLLTFLFPTGEPPRRTVSVGERVLERQERLAGAVIGVSCILGLTGAWYILLFYGGAGVVLCLLHGVFRPRSMGSKASRASAEARA 148
            MR WG+FF +FK PRAW   VLDER+TTN LHYRGNY  V  G ++V IVS+P +LL       LL FLFPT E   R V V  R +   ER   A++ +  +L  TGA   LL+  G     CL H VFRPR++ SK +R   EARA
Sbjct:   47 MRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPT-ETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARA 193          
BLAST of mRNA_L-elsbetiae_contig6008.14536.1 vs. uniprot
Match: A0A7S2UXU1_9STRA (PRA1 family protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.760e-29
Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 0
Query:    1 MRGWGDFFARFKAPRAWNTTVLDERLTTNFLHYRGNYSVVAAGLLIVGIVSNPYVLLALICCALLLTFLFPTGEPPRRTVSVGERVLERQERLAGAVIGVSCILGLTGAWYILLFYGGAGVVLCLLHGVFRPRSMGSKASRASAEARAGF 150
            M+ WG+FFARFK P+ W+ T L++R+ TN+LHYRGNY  V   + ++ +V  P + L L  C      L P   P  R V VG+R+L R E L  A IG   +L  +G  Y LL     G  +C+ H V RPR++GSK +R   EA+ GF
Sbjct:   28 MQPWGEFFARFKPPKRWDQTSLEQRINTNYLHYRGNYLFVMVAVTLLHVVLAPVMALVLAVCVCGFILLAP---PSGREVRVGQRLLSRNEGLVLASIGSLALLLWSGTLYRLLMVLSLGFAVCVAHMVLRPRTLGSKTNRFMEEAKVGF 174          
BLAST of mRNA_L-elsbetiae_contig6008.14536.1 vs. uniprot
Match: A0A482SWI0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWI0_9ARCH)

HSP 1 Score: 73.6 bits (179), Expect = 8.410e-13
Identity = 48/153 (31.37%), Postives = 84/153 (54.90%), Query Frame = 0
Query:    1 MRGWGDFFARFKAPRAWNTTVLDERLTTNFLHYRGNYSVVAAGLLIVGIVSNPYVLLALICCALLLTFLFPTGEPPRRTVSVGERVLERQERLAGAVIGVSCILGLTGAWYILLFYGGAGVVLCLLHGVFRPRSMGSKASRASAEARA-GFTI 152
            M+ W +FFA FK P+ +++  L++R+TTNFLHYR NY  ++ G+LI+ I++NP ++L+ +    + T++      P          + +Q   AG    +    G        LFY    +++C +H + RPRS+ SKA+R   E +  G+++
Sbjct:   33 MKPWSEFFATFKPPQ-FDSRHLEQRITTNFLHYRSNYLAISLGILILQILTNPVIILSSVAIFGICTYVLQVHRKPFIIGDFSFDGVGKQYLCAGLSAIILFATGTVVKLCWCLFYI---ILVCGIHMLLRPRSVSSKANRMYEEMKLKGYSV 181          
BLAST of mRNA_L-elsbetiae_contig6008.14536.1 vs. uniprot
Match: A0A7S1TSJ8_9STRA (PRA1 family protein n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSJ8_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 7.290e-5
Identity = 42/145 (28.97%), Postives = 69/145 (47.59%), Query Frame = 0
Query:    4 WGDFFARFKAPRAWNTTVLDERLTTNFLHYRGNYSVVAAGLLIVGIVSNPYVLLALICCALLLTFLFPTGEPPRRTVSVGERVLERQERLAGAVIGVSCILGLTGAWYILLFYGGAGVVLCLLHGVFRPRSMGSKASRASAEARA 148
            WG+F      P+ +N  V+ +R+T NFL++RGNY   AA ++++ ++ +P  +  L+  AL L  L  T   P   + V    L+ + R     +    +  +TGA   LL        L   H V +  S  ++A+ A  E RA
Sbjct:   37 WGEFLDDLAVPQDFNAAVVKQRITQNFLYFRGNYMACAAVVVLLFVLMSPTTIFVLVLAALGLVALQATRNSP---IVVQGTNLDFKTRAILFGVATFLLAVITGALGTLLLSLSVAGTLATAHMVCKSPSAAARAN-AREEERA 177          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6008.14536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LEX3_ECTSI5.650e-10186.55PRA1 family protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z7M0_9STRA1.380e-3349.32PRA1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2UXU1_9STRA5.760e-2942.67PRA1 family protein n=2 Tax=Fibrocapsa japonica Ta... [more]
A0A482SWI0_9ARCH8.410e-1331.37Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1TSJ8_9STRA7.290e-528.97PRA1 family protein n=5 Tax=Phaeomonas parva TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 1..138
e-value: 5.3E-27
score: 94.2
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 2..141
NoneNo IPR availablePANTHERPTHR19317:SF0PRENYLATED RAB ACCEPTOR PROTEIN 1coord: 2..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..130
NoneNo IPR availableTMHMMTMhelixcoord: 39..70
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6008contigL-elsbetiae_contig6008:5631..10206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6008.14536.1mRNA_L-elsbetiae_contig6008.14536.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6008 4982..10219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6008.14536.1 ID=prot_L-elsbetiae_contig6008.14536.1|Name=mRNA_L-elsbetiae_contig6008.14536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MRGWGDFFARFKAPRAWNTTVLDERLTTNFLHYRGNYSVVAAGLLIVGIV
SNPYVLLALICCALLLTFLFPTGEPPRRTVSVGERVLERQERLAGAVIGV
SCILGLTGAWYILLFYGGAGVVLCLLHGVFRPRSMGSKASRASAEARAGF
TIENAQNFVENVFGMNNSRSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1