prot_L-elsbetiae_contig6008.14535.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6008.14535.1
Unique Nameprot_L-elsbetiae_contig6008.14535.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length138
Homology
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: D8LEX4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX4_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 1.780e-79
Identity = 126/136 (92.65%), Postives = 131/136 (96.32%), Query Frame = 0
Query:    3 SAVGGSAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 138
            SAV GSAVEAR  V++AV  LTGALFQRPPLISAVKRQLR+RTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVL+E+GNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV
Sbjct:  161 SAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 296          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: A0A7S2U867_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U867_9STRA)

HSP 1 Score: 223 bits (567), Expect = 2.730e-72
Identity = 108/131 (82.44%), Postives = 119/131 (90.84%), Query Frame = 0
Query:    8 SAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 138
            +AVE    + RAV  LTGALFQRPPLISAVKRQLR+RTIY+SKLIEYD  R+LGIFWVSC+AGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAED N+VTMHDV+DAQHV+DT KDE YLRR++MPLEV
Sbjct:    8 AAVEDSKVLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDPKRNLGIFWVSCEAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDDNMVTMHDVMDAQHVFDTTKDEKYLRRVVMPLEV 138          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: A0A7S3V9Q7_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9Q7_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.940e-69
Identity = 106/131 (80.92%), Postives = 119/131 (90.84%), Query Frame = 0
Query:    8 SAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 138
            SA+E    + RAV  LTGALFQRPPLISAVKRQLR+RTIY+SKLIE+D DR+LGIFWVSC+AGTY+RTLCVHLGL+VGTGGHMQELRRVRSG+L ED NLVTMHDVLDAQHVYDT KDE YLRR++MPLE+
Sbjct:  152 SAIEDTKQLNRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEFDKDRNLGIFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGILGEDNNLVTMHDVLDAQHVYDTTKDEKYLRRVVMPLEI 282          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: A0A7S2KWJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KWJ2_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.350e-68
Identity = 105/131 (80.15%), Postives = 118/131 (90.08%), Query Frame = 0
Query:    8 SAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 138
            SA+E    + RAV  LTGALFQRPPLISAVKRQLR+RTIY+SKLIEYD  R+LGIFWVSC+AGTY+RT+CVHLGL+VGTGGHMQELRRVRSGV+AE  NLVTMHDV+DAQHVYDT KDE YLRR++MPLEV
Sbjct:  153 SAIEDTKALHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIFWVSCEAGTYIRTMCVHLGLLVGTGGHMQELRRVRSGVMAEKDNLVTMHDVMDAQHVYDTTKDEKYLRRVVMPLEV 283          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: K0R6K1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6K1_THAOC)

HSP 1 Score: 220 bits (561), Expect = 7.760e-68
Identity = 105/131 (80.15%), Postives = 119/131 (90.84%), Query Frame = 0
Query:    8 SAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 138
            SA++    + RAV  LTGALFQRPPLISAVKRQLR+RTIY+SKLIEYD+ R+LGIFWVSC+AGTYVRTLCVHLGL+VGTGGHMQELRRVRSGV+AE  NLVTMHDV+DAQHV+DT KDE YLRR++MPLEV
Sbjct:  180 SAIDDNKKLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDDQRNLGIFWVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVMAEKDNLVTMHDVMDAQHVFDTTKDEKYLRRVVMPLEV 310          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: A0A7S2P2C5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2C5_9STRA)

HSP 1 Score: 216 bits (550), Expect = 2.030e-67
Identity = 102/131 (77.86%), Postives = 118/131 (90.08%), Query Frame = 0
Query:    8 SAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 138
            SA+     + RAV  LTGALFQRPPLISAVKRQLR+RTIY+SKLIEYD DR+LG+FWVSC+AGTY+RTLCVHLGL+VGTGGHMQELRRVRSGVL E+ ++VTMHD+LDAQHVYDT KDESYLRR++ PLE+
Sbjct:    8 SALSDNLKLNRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDPDRNLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDDMVTMHDILDAQHVYDTTKDESYLRRVVRPLEI 138          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: A0A7S2EEZ8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EEZ8_TRICV)

HSP 1 Score: 213 bits (542), Expect = 3.490e-67
Identity = 100/120 (83.33%), Postives = 113/120 (94.17%), Query Frame = 0
Query:   19 AVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 138
            AV  LTGALFQRPPLISAVKRQLR+RTIY+SKLIEYD  R+LGIFWVSC+AGTYVRTLCVHLGL+VGTGGHMQELRRVRSGV++E+ N+VTMHDV+DAQHVYDT KDE YLRR+++PLEV
Sbjct:    1 AVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIFWVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVMSENDNMVTMHDVMDAQHVYDTTKDEKYLRRVVVPLEV 120          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: B8C572_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C572_THAPS)

HSP 1 Score: 219 bits (557), Expect = 3.490e-67
Identity = 106/130 (81.54%), Postives = 117/130 (90.00%), Query Frame = 0
Query:    8 SAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLE 137
            SA+E    + RAV  LTGALFQRPPLISAVKRQLR+RTIY+SKLIEYD  R+LGIFWVSC+AGTYVRTLCVHLGL+VGTGGHMQELRRVRSGVL E+ NLVTMHDV+DAQHVYDT KDE YLRR++MPLE
Sbjct:  125 SALEDTKQLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIFWVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVLDENDNLVTMHDVMDAQHVYDTTKDEKYLRRVVMPLE 254          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: A0A7S1H3E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H3E1_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.530e-66
Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 0
Query:   19 AVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLE 137
            AV  LTGALFQRPPLISAVKRQLR+RTIY+SKL+E+D  R+LGI WV C+AGTYVRT CVHLGL+VGTGGHMQELRRVRSGVL ED N+VTMHDVLDAQHVYDT KDE+YLRR++MPLE
Sbjct:   21 AVETLTGALFQRPPLISAVKRQLRIRTIYESKLLEFDQQRNLGIVWVKCEAGTYVRTFCVHLGLLVGTGGHMQELRRVRSGVLGEDDNMVTMHDVLDAQHVYDTTKDETYLRRVVMPLE 139          
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Match: A0A2D4CBX7_PYTIN (H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX7_PYTIN)

HSP 1 Score: 218 bits (554), Expect = 2.060e-66
Identity = 103/131 (78.63%), Postives = 117/131 (89.31%), Query Frame = 0
Query:    8 SAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV 138
            SA+E +  + RA+  LTGALFQRPPLISAVKRQLR+RTIYDSKLIEYD DRHLG+FWVSC+AGTY+RTLCVHLGL++G GGHMQELRRVRSGVL E  ++VTMHDVLDAQ+ YDT KDESYLRRI+ PLEV
Sbjct:  159 SAIEGQAKLARAIETLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDQDRHLGVFWVSCEAGTYIRTLCVHLGLVLGVGGHMQELRRVRSGVLGEQDSMVTMHDVLDAQYQYDTYKDESYLRRIVRPLEV 289          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6008.14535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEX4_ECTSI1.780e-7992.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2U867_9STRA2.730e-7282.44Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S3V9Q7_9STRA1.940e-6980.92Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2KWJ2_9STRA3.350e-6880.15Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
K0R6K1_THAOC7.760e-6880.15Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2P2C5_9STRA2.030e-6777.86Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2EEZ8_TRICV3.490e-6783.33Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
B8C572_THAPS3.490e-6781.54Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1H3E1_9STRA1.530e-6682.35Hypothetical protein (Fragment) n=1 Tax=Thalassion... [more]
A0A2D4CBX7_PYTIN2.060e-6678.63H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032819tRNA pseudouridylate synthase B, C-terminalPFAMPF16198TruB_C_2coord: 74..137
e-value: 1.6E-20
score: 73.0
NoneNo IPR availableGENE3D3.30.2350.10coord: 2..135
e-value: 2.3E-37
score: 130.6
NoneNo IPR availablePANTHERPTHR23127:SF0H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 4coord: 8..138
IPR004802tRNA pseudouridine synthase B familyPANTHERPTHR23127CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5coord: 8..138
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 15..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6008contigL-elsbetiae_contig6008:539..1480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6008.14535.1mRNA_L-elsbetiae_contig6008.14535.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6008 539..1480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6008.14535.1 ID=prot_L-elsbetiae_contig6008.14535.1|Name=mRNA_L-elsbetiae_contig6008.14535.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
MRSAVGGSAVEARNTVQRAVTKLTGALFQRPPLISAVKRQLRVRTIYDSK
LIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGV
LAEDGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032819TruB_C
IPR004802tRNA_PsdUridine_synth_B_fam
IPR020103PsdUridine_synth_cat_dom_sf