prot_L-elsbetiae_contig6002.14530.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6002.14530.1
Unique Nameprot_L-elsbetiae_contig6002.14530.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length236
Homology
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BLAST of mRNA_L-elsbetiae_contig6002.14530.1 vs. uniprot
Match: D7G857_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G857_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 8.990e-120
Identity = 163/235 (69.36%), Postives = 191/235 (81.28%), Query Frame = 0 
Query:    1 SELDFVHGSFPFLVWDHSGHTSRLVGWLLRFDQNLRFKYSALPSKLVGWEVRVVESDSNWNTNLHQHSRSSERFLFDLKLLEMDYLEDPMDLHTLYYLGITTFAYLESLMGKGSHEKTPELEALVMSGMSYFGQTIDLHGDIENSELVWGSKRWLAYGYHFFIDDKEKAEGAYEACVDYDPARVDCVVFLSRLYLANGDLDAAWDKAKMALLHRPVAGSVLTYFYTFECFVSAQV 235
            SELDFVHGSFPFLVWDHSGHTSRL+GWL RFD+NLRFKY          +VRVVESDSNWN      SRS ERF FDL+ LE++Y +DP DLHTL+YLGIT FAY+ESL+GKG+HEKTPEL+A +  GMSYF Q +DLHG+I NSELVWGSKRWL+YGYH+F+ D E+AE  Y++C++YD AR+DC+VFLSRLYL N  LDAAWD AK  L+HRP AG V+TYFYTFECF+  QV
Sbjct:  185 SELDFVHGSFPFLVWDHSGHTSRLMGWLHRFDKNLRFKYR---------QVRVVESDSNWNAXXXXXSRSFERFKFDLEFLELEYEDDPTDLHTLFYLGITKFAYIESLLGKGTHEKTPELQAFITDGMSYFRQAVDLHGEIPNSELVWGSKRWLSYGYHYFVGDSEEAEKMYKSCIEYDRARIDCLVFLSRLYLDNNALDAAWDTAKEGLVHRPPAGQVMTYFYTFECFLPTQV 410
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6002.14530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G857_ECTSI8.990e-12069.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 161..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6002contigL-elsbetiae_contig6002:3..2478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6002.14530.1mRNA_L-elsbetiae_contig6002.14530.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6002 3..2478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6002.14530.1 ID=prot_L-elsbetiae_contig6002.14530.1|Name=mRNA_L-elsbetiae_contig6002.14530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
SELDFVHGSFPFLVWDHSGHTSRLVGWLLRFDQNLRFKYSALPSKLVGWE
VRVVESDSNWNTNLHQHSRSSERFLFDLKLLEMDYLEDPMDLHTLYYLGI
TTFAYLESLMGKGSHEKTPELEALVMSGMSYFGQTIDLHGDIENSELVWG
SKRWLAYGYHFFIDDKEKAEGAYEACVDYDPARVDCVVFLSRLYLANGDL
DAAWDKAKMALLHRPVAGSVLTYFYTFECFVSAQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf