prot_L-elsbetiae_contig60.14517.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig60.14517.1
Unique Nameprot_L-elsbetiae_contig60.14517.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length323
Homology
BLAST of mRNA_L-elsbetiae_contig60.14517.1 vs. uniprot
Match: A0A6H5K822_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K822_9PHAE)

HSP 1 Score: 434 bits (1115), Expect = 3.840e-147
Identity = 228/254 (89.76%), Postives = 242/254 (95.28%), Query Frame = 0
Query:    1 MVLSGGASVAGAALGAMISKSTIQQTPVMSLVGLVVGLILSVAKGAFGDLFRALGLASVLAVTRSHRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADALAELEEAGVA-DDGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTRNARGDLTRLLGMRTVAFLGLVSEINSDVALSAKARVVGGICFSKAMFWDSKYHIKDRVVVMLANLYAAVAKLVGRVQREAGD 253
            +VLSGGASVAGAALG +ISKSTIQ+TPVMSLVGL+VGL+LSVA+GAFGDLFRALGLASVLAV+RS RLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADA+AELE+AGV  D GNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLAT +NARGDLTRLLGMRTVAFLGLVSEI+SDVALSAKA+VVGGICFSKAMFWD KYHIKDRVVV+L NLYAA  KLV RVQR+A D
Sbjct:  203 LVLSGGASVAGAALGVIISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATMKNARGDLTRLLGMRTVAFLGLVSEIDSDVALSAKAKVVGGICFSKAMFWDRKYHIKDRVVVLLTNLYAAAVKLVRRVQRDASD 456          
BLAST of mRNA_L-elsbetiae_contig60.14517.1 vs. uniprot
Match: D8LMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ8_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 1.250e-128
Identity = 194/209 (92.82%), Postives = 203/209 (97.13%), Query Frame = 0
Query:   17 MISKSTIQQTPVMSLVGLVVGLILSVAKGAFGDLFRALGLASVLAVTRSHRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADALAELEEAGVA-DDGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTRNARGDLTRLLGMRTVAFLGLVSEINSDVALSAKARVVGGICFSKAMFWDSKYH 224
            MISKSTIQ+TPVMSLVGL+VGL+LSVA+GAFGDLFRALGLASVLAV+RS RLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADA+AELE+AGV  D GNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATT+NARGDLTRLLGMRTVAFLGLVSEINSDVALSAK +VVGGICFSKAMFWD KYH
Sbjct:    1 MISKSTIQRTPVMSLVGLLVGLVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTKNARGDLTRLLGMRTVAFLGLVSEINSDVALSAKGKVVGGICFSKAMFWDRKYH 209          
BLAST of mRNA_L-elsbetiae_contig60.14517.1 vs. uniprot
Match: A0A835Z6C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C8_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.940e-40
Identity = 96/216 (44.44%), Postives = 131/216 (60.65%), Query Frame = 0
Query:    6 GASVAGAALGAMISKSTIQQTPVMSLVGLVVGLILSVAKGAFGDLFRALGLASVLAVTRSHRLSAEYPFLPYARRALVMLPRRPFPPA---ENPWKYKRADALAELEEAGVADDGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTRNARGDLTRLLGMRTVAFLGLVSEINSDVALSAKARVVGGICFSKAMF 218
            G+ + GA +G  IS+ST+ +TP M+L GL +GL+LS+A+GAFGDL RALGL + L V RS  + ++YP LP  + A+ M PRRPFPP    E+  +Y+                     EFS  K+LL++AF+GG AGY  S+ P   LP  + AL   G  AY  T R + GDL RL GMR  A LG+V+ ++++V    KARVVG +CF+K  F
Sbjct:  154 GSGLVGAVIGVAISESTVHKTPSMALAGLFLGLMLSIARGAFGDLLRALGLGAYLTVVRSASIGSKYPILPQLKAAMHMGPRRPFPPVPIGESLSRYRPVPGGP---------------EFSTMKALLAMAFMGGMAGYFGSK-PVPLLPEVLGALATAGCAAYATTLRTSAGDLARLGGMRFAALLGVVTGVDAEVRAWDKARVVGRLCFAKLAF 353          
BLAST of mRNA_L-elsbetiae_contig60.14517.1 vs. uniprot
Match: A0A7S2A8I8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8I8_TRICV)

HSP 1 Score: 116 bits (290), Expect = 1.360e-26
Identity = 86/247 (34.82%), Postives = 126/247 (51.01%), Query Frame = 0
Query:    1 MVLSGGASVAGAALGAMISKSTIQQTPVMSLVGLVVGLI--LSVAKGAFGDLFRALGLASVLAVTRSHRLSAEYPFLPYARRALVMLPRRPFPPA-----------ENPWKYKRADALAELEEAGVADDGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVFLPTFMLALGGGGFLAYLATTRNARGDLTRLLGMRTVAFLGLVSEINSDVALSAKARVVGGICFSKAMFWDSKYHIKDRVVVMLA 234
            +VLS  A  AG  +G  +++ST+ +    ++      L   L+  +  +G+L ++LG A VL   R+  +   YP   + +  L M  R PFPP            ENPW Y R  A  +L       D     EFSM K  ++ A +GG  G   S  P +  P++M A GG   LA+L+T R+ARGDL R  GMR VA L  + E+N+++ ++ KA  VGG  F + M  D K+ IKDR+   +A
Sbjct:   51 LVLSSAA--AGYGIGTFLARSTLPRGAADTVGPASAALFATLTFLRNDYGELSKSLGAALVLVAGRAGGVRRRYPTKSHLKSMLAMGRRTPFPPLTSEPDDEGVVNENPWTY-RPRARRDLPPDAEGPDP----EFSMIKCAIAAAAVGGICG---SDLPLI--PSWMGAAGGAAALAFLSTLRSARGDLARTAGMRVVAILTELLEVNNELGVAGKAATVGGKIFDRVMILDRKHRIKDRLTAGMA 285          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig60.14517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K822_9PHAE3.840e-14789.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMQ8_ECTSI1.250e-12892.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z6C8_9STRA2.940e-4044.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2A8I8_TRICV1.360e-2634.82Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..169
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..322
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..148
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..24
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
NoneNo IPR availableTMHMMTMhelixcoord: 146..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig60contigL-elsbetiae_contig60:2409..5469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig60.14517.1mRNA_L-elsbetiae_contig60.14517.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig60 1733..5531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig60.14517.1 ID=prot_L-elsbetiae_contig60.14517.1|Name=mRNA_L-elsbetiae_contig60.14517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=323bp
MVLSGGASVAGAALGAMISKSTIQQTPVMSLVGLVVGLILSVAKGAFGDL
FRALGLASVLAVTRSHRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYK
RADALAELEEAGVADDGNLPAEFSMAKSLLSVAFLGGFAGYLVSQFPFVF
LPTFMLALGGGGFLAYLATTRNARGDLTRLLGMRTVAFLGLVSEINSDVA
LSAKARVVGGICFSKAMFWDSKYHIKDRVVVMLANLYAAVAKLVGRVQRE
AGDADDDGDCSESDADGGALSEDEERQRPRSRRRRRPPQGEPPMPTSPPP
PPPPPPSGYPEGGGYQGQGGGW*
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